^{version 1.0}

An aid to the identification of genomics islands, including pathogenicity islands, of potentially horizontally transferred genes

See the help file for more information, plus analyses that illustrate the utility of IslandPath.

Select the button below for a given organism to view a graphical representation of the organism's genome with some features commonly associated with genomic islands marked. These features include abnormal %G+C, dinucleotide bias, proximity to tRNA and other structural RNA and the presence of mobility genes (transposases and integrases). Plain text tables of the ORF %G+C data and ORF-cluster dinucleotide bias data are also available by request. A cautionary note: This analysis does not definitely identify islands of horizontally transferred genes, but rather should be considered a guide for the identification of clusters of genes that are more likely to have horizontal origins. A reminder that such analysis only identifies a subset of potential recent horizontal transfers (i.e. those that involve genetic exchange between organisms of differing DNA signatures). See the publication associated with IslandPath for further information (William Hsiao, Ivan Wan, Steven J. Jones, and Fiona S.L. Brinkman, Bioinformatics, Feb 2003 PMID:12584130). We thank the National Centre for Biotechnology Information (NCBI), particularly Tatiana Tatusov, for providing helpful files for IslandPath and acknowledge the efforts of the many microbial and other genome projects that have made such an analysis possible.

IslandPath is maintained by William Hsiao of the Brinkman Laboratory at Simon Fraser University, BC, Canada. Email islandpath-mail@sfu.ca with any questions/comments. If you wish to be notified of changes to islandpath, you can subscribe to the islandpath-update mailing list by sending an email to maillist@sfu.ca with "subscribe islandpath-update" in the subject or body of the message.

The tables below list organisms alphabetically. You may also view this data according to a measure of %G+C variance in the genome. The gene G+C variance for a bacterial genome appears to reflect the number of incidences of recent horizontal gene exchange with organisms of differing G+C ratios, for extreme cases.

• Pathogenic Bacteria
• Bacteria that are primarily non-pathogenic
• Archaea
  

Pathogenic Bacteria

Organism	Approximate host range	"Primary" Disease	Habitat	No. of protein coding ORFs	%G+C Mean (all ORFs)	%G+C S.D. (all ORFs)	%G+C Mean (ORFs >300bp)	%G+C S.D. (ORFs >300bp)	Genome Dinucleotide Bias Mean	Genome Dinucleotide Bias S.D.	Interactive Graphical View of ORFs
Acidovorax avenae subsp. citrulli AAC00-1, complete genome	Fruit	Bacterial fruit blotch	Multiple	4709	68.56	4.93	68.71	4.87	48.76	19.30
Acinetobacter baumannii ACICU, complete genome	Human	Nosocomial infections, nosocomial pneumonia	Aquatic	3667	39.53	4.01	39.77	3.69	48.97	22.50
Acinetobacter baumannii ATCC 17978, complete genome	Human	Nosocomial infections, nosocomial pneumonia	Multiple	3352	40.16	3.49	40.17	3.43	49.04	19.71
Acinetobacter baumannii AYE, complete genome	Human	Nosocomial infections, nosocomial pneumonia	Aquatic	3607	39.84	4.51	39.94	4.20	0.00	0.00
Acinetobacter baumannii, complete genome	Human	Nosocomial infections, nosocomial pneumonia	Aquatic	2913	39.74	3.25	39.83	3.13	0.00	0.00
Acinetobacter sp. ADP1, complete genome	Human	Nosocomial infections in immunocompromised individuals	Multiple	3325	40.81	4.14	41.15	3.82	44.46	22.97
Actinobacillus pleuropneumoniae L20, complete genome	Porcine	Fibrinous and necrotizing pleuropneumonia	Host-associated	2012	41.85	3.64	42.00	3.60	50.01	24.39
Actinobacillus pleuropneumoniae serovar 3 str. JL03, complete genome	Porcine	Fibrinous and necrotizing pleuropneumonia	Host-associated	2036	41.53	4.09	41.86	3.80	50.61	25.40
Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete genome	Porcine	Fibrinous and necrotizing pleuropneumonia	Host-associated	2131	41.72	3.73	41.90	3.64	52.78	25.94
Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome	Animal	Gastroenteritis, septicemia, and others	Multiple	4122	62.23	5.38	62.53	5.25	49.77	21.07
Aeromonas salmonicida subsp. salmonicida A449, complete genome	Fish	Furunculosis	Aquatic	4086	58.96	5.32	59.30	5.21	47.96	20.52
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence	Plant	N/A	Multiple	1876	59.32	3.51	59.73	3.04	38.83	16.25
Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence	Plant	N/A	Multiple	2785	59.40	3.37	59.86	2.75	38.64	16.25
Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence	Plant	Tumors	Multiple	2765	59.52	3.25	59.93	2.72	38.73	16.41
Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence	Plant	Tumors	Multiple	1851	59.48	3.31	59.79	2.96	38.47	16.15
Aliivibrio salmonicida LFI1238 chromosome 1, complete genome	Fis	Hitra disease	Aquatic	2820	39.44	3.11	39.53	3.00	42.95	17.33
Aliivibrio salmonicida LFI1238 chromosome 2, complete genome	Fis	Hitra disease	Aquatic	984	38.48	3.51	38.70	3.33	41.50	15.67
Anaplasma marginale str. St. Maries, complete genome	Cattle	Bovine anaplasmosis	Host-associated	949	49.65	2.84	49.65	2.73	42.92	20.53
Anaplasma phagocytophilum HZ, complete genome	Human, Animal	Human granulocytic anaplasmosis	Host-associated	1264	42.22	3.33	42.64	2.66	46.72	20.28
Arcobacter butzleri RM4018, complete genome	Human	Gastroenteritis and bacteremia	Multiple	2259	26.98	3.50	27.01	3.38	46.42	17.44
Aster yellows witches'-broom phytoplasma AYWB, complete genome	Plant	Aster yellows witches'-broom	Host-associated	671	27.55	4.88	28.19	4.61	76.68	34.32
Bacillus anthracis str. 'Ames Ancestor', complete genome	Animal	Anthrax	Terrestrial	5309	35.42	3.63	35.77	3.20	50.80	20.18
Bacillus anthracis str. Ames, complete genome	Animal	Anthrax	Multiple	5311	35.42	3.63	35.77	3.20	50.80	20.18
Bacillus anthracis str. Sterne, complete genome	Animal	Anthrax	Multiple	5287	35.52	3.39	35.73	3.21	49.98	19.68
Bacillus cereus ATCC 10987, complete genome	Human	Food poisoning	Terrestrial	5603	35.34	4.00	35.86	3.37	52.15	21.32
Bacillus cereus ATCC 14579, complete genome	Human	Food poisoning	Terrestrial	5234	35.40	3.53	35.61	3.29	52.15	22.37
Bacillus cereus E33L, complete genome	Human, Animal	Food poisoning	Terrestrial	5134	35.50	3.43	35.70	3.22	49.80	20.52
Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome	Human	Food poisoning	Terrestrial	3833	35.91	3.35	36.13	3.17	49.38	22.22
Bacillus licheniformis ATCC 14580, complete genome	Human	Food poisoning	Terrestrial	4178	46.10	4.62	46.71	4.16	45.11	23.14
Bacillus licheniformis ATCC 14580, complete genome	Human	Food poisoning	Terrestrial	4196	46.17	4.53	46.66	4.19	44.78	22.94
Bacillus thuringiensis serovar konkukian str. 97-27, complete genome	Insect	Sotto disease	Multiple	5117	35.52	3.51	35.69	3.34	50.14	21.41
Bacillus thuringiensis str. Al Hakam, complete genome	Insect	Sotto disease	Multiple	4736	35.66	3.36	35.75	3.24	48.78	20.76
Bacillus weihenstephanensis KBAB4, complete genome	Human	Food poisoning	Terrestrial	5155	35.66	3.54	35.86	3.27	49.81	20.36
Bacteroides fragilis NCTC 9343, complete genome	Human	Severe infection, diarrhea, and abcesses	Host-associated	4184	43.41	5.62	43.83	5.38	42.79	18.23
Bacteroides fragilis YCH46, complete genome	Human	Severe infection, diarrhea, and abcesses		4578	43.19	5.60	43.79	5.27	43.86	18.55
Bacteroides thetaiotaomicron VPI-5482, complete genome	Mammal	Opportunistic peritoneal diseases	Host-associated	4778	43.33	5.15	43.60	4.95	44.90	19.64
Bacteroides vulgatus ATCC 8482, complete genome	Mammal	Opportunistic peritoneal diseases	Host-associated	4065	42.76	4.99	42.95	4.89	42.18	18.31
Bartonella bacilliformis KC583, complete genome	Human	Carrion's disease, Oroya fever	Host-associated	1283	39.00	4.11	39.41	3.21	45.64	21.76
Bartonella henselae str. Houston-1, complete genome	Human, Animal	Bacillary angiomatosis, Cat scratch fever	Host-associated	1488	39.55	3.26	39.69	3.11	45.26	23.36
Bartonella quintana str. Toulouse, complete genome	Human	Bacillary angiomatosis, Trench fever	Host-associated	1142	40.09	2.94	40.15	2.80	40.18	17.48
Bartonella tribocorum CIP 105476, complete genome	Rat	Bartinellosis	Host-associated	2074	40.29	4.00	40.43	3.81	49.42	23.74
Bdellovibrio bacteriovorus HD100, complete genome	Gram-negative bacteria	Cell lysis	Multiple	3587	50.40	3.19	50.68	2.75	40.38	16.54
Bordetella avium 197N, complete genome	Animal	Bordetellosis	Host-associated	3381	61.72	3.65	61.95	3.39	42.44	17.49
Bordetella bronchiseptica RB50, complete genome	Animal	Respiratory diseases	Host-associated	4994	68.04	4.23	68.29	4.02	47.61	19.49
Bordetella parapertussis 12822, complete genome	Human, Sheep	Respiratory deseases	Host-associated	4185	68.05	4.08	68.26	3.89	45.63	18.29
Bordetella pertussis Tohama I, complete genome	Human	Respiratory deseases	Host-associated	3436	67.71	3.90	67.94	3.67	44.11	17.20
Borrelia afzelii PKo, complete genome	Human	Acrodermatitis chronica atrophicans	Host-associated	855	28.07	3.95	28.35	3.59	45.20	16.08
Borrelia burgdorferi B31, complete genome	Human	Lyme disease	Host-associated	851	28.42	3.85	28.67	3.55	45.21	16.77
Borrelia duttonii Ly, complete genome	Human	Tick-borne relapsing fever	Host-associated	820	27.76	3.62	27.72	3.58	45.87	17.42
Borrelia garinii PBi chromosome linear, complete sequence	Human	Lyme disease	Host-associated	832	28.23	3.90	28.42	3.60	45.24	16.14
Borrelia hermsii DAH, complete genome	Human	Tick-borne relapsing fever	Host-associated	819	29.91	3.52	29.92	3.44	42.25	15.95
Borrelia recurrentis A1, complete genome	Human	Louse-borne relapsing fever	Host-associated	800	27.65	3.61	27.61	3.57	45.76	17.35
Borrelia turicatae 91E135, complete genome	Human	Tick-borne relapsing fever	Host-associated	818	29.24	3.53	29.23	3.47	42.75	16.38
Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence	Human, Cattle	Brucellosis	Host-associated	1055	57.17	4.21	58.15	2.90	40.23	17.06
Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence	Human, Cattle	Brucellosis	Host-associated	2030	57.12	4.21	58.04	3.25	42.56	21.04
Brucella abortus S19 chromosome 2, complete sequence	Mammal	Spontaneous abortion	Multiple	1033	57.69	3.56	58.26	2.64	38.72	15.93
Brucella abortus S19 chromosome 1, complete sequence	Mammal	Spontaneous abortion	Multiple	1967	57.60	3.62	58.19	2.96	41.25	20.46
Brucella canis ATCC 23365 chromosome II, complete sequence	Dog, Human	Canine brucellosis		1149	57.04	4.25	58.07	2.97	40.22	16.71
Brucella canis ATCC 23365 chromosome I, complete sequence	Dog, Human	Canine brucellosis		2102	57.15	4.17	58.09	3.13	42.66	21.33
Brucella melitensis 16M chromosome I, complete sequence	Human, Animal	Brucellosis	Host-associated	2059	57.58	3.72	58.02	3.30	42.68	22.35
Brucella melitensis 16M chromosome II, complete sequence	Human, Animal	Brucellosis	Host-associated	1139	57.71	3.41	58.13	2.81	40.03	15.74
Brucella melitensis biovar Abortus 2308 chromosome I, complete sequence	Human, cattle	Brucellosis	Host-associated	2000	57.25	4.06	58.07	3.21	42.36	20.83
Brucella melitensis biovar Abortus 2308 chromosome II, complete sequence	Human, cattle	Brucellosis	Host-associated	1034	57.35	3.92	58.18	2.78	38.67	14.51
Brucella ovis ATCC 25840 chromosome II, complete sequence	Sheep	Inflammation of the epididymis and placenta	Host-associated	962	57.51	3.48	57.96	2.77	39.51	16.49
Brucella ovis ATCC 25840 chromosome I, complete sequence	Sheep	Inflammation of the epididymis and placenta	Host-associated	1928	57.49	3.63	57.99	3.09	41.20	20.41
Brucella suis 1330 chromosome I, complete sequence	Human, Animal	Brucellosis, infectious abortions, fever	Host-associated	2123	57.00	4.33	58.08	3.21	43.27	21.98
Brucella suis 1330 chromosome II, complete sequence	Human, Animal	Brucellosis, infectious abortions, fever	Host-associated	1148	56.92	4.54	58.12	2.95	40.89	17.63
Brucella suis ATCC 23445 chromosome I, complete sequence	Human, Animal	Brucellosis, infectious abortions, fever	Host-associated	1921	57.01	4.26	57.98	3.22	43.38	21.71
Brucella suis ATCC 23445 chromosome II, complete sequence	Human, Animal	Brucellosis, infectious abortions, fever	Host-associated	1320	57.10	4.24	58.16	2.98	40.66	16.81
Burkholderia ambifaria MC40-6 chromosome 1, complete sequence	Human	Cepacia syndrome	Multiple	3074	66.98	4.33	67.28	4.03	0.00	0.00
Burkholderia ambifaria MC40-6 chromosome 3, complete sequence	Human	Cepacia syndrome	Multiple	967	65.87	4.32	66.21	4.12	0.00	0.00
Burkholderia ambifaria MC40-6 chromosome 2, complete sequence	Human	Cepacia syndrome	Multiple	2382	66.73	4.30	67.03	4.07	0.00	0.00
Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence	Human	Necrotizing pneumonia, chronic infections		2472	66.90	4.25	67.18	4.05	47.70	21.57
Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence	Human	Necrotizing pneumonia, chronic infections		2965	67.04	4.34	67.31	4.14	48.04	20.47
Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence	Human	Necrotizing pneumonia, chronic infections		1040	67.02	3.58	67.23	3.40	46.59	17.71
Burkholderia cenocepacia J2315 chromosome 2, complete genome	Human	Necrotizing pneumonia and chronic infections	Multiple	2807	67.38	4.20	67.60	4.02	48.26	23.47
Burkholderia cenocepacia J2315 chromosome 3, complete genome	Human	Necrotizing pneumonia and chronic infections	Multiple	752	66.83	4.26	67.10	4.09	50.23	22.08
Burkholderia cenocepacia J2315 chromosome 1, complete genome	Human	Necrotizing pneumonia and chronic infections	Multiple	3464	66.82	4.60	67.12	4.35	51.32	24.94
Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence	Human	Necrotizing pneumonia, chronic infections	Multiple	2795	66.84	4.32	67.06	4.19	0.00	0.00
Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence	Human	Necrotizing pneumonia, chronic infections	Multiple	1053	66.44	4.30	66.60	4.17	0.00	0.00
Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence	Human	Necrotizing pneumonia, chronic infections	Multiple	3160	66.92	4.25	67.19	4.06	0.00	0.00
Burkholderia mallei ATCC 23344 chromosome 1, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	2995	67.65	4.60	68.18	3.87	49.36	19.37
Burkholderia mallei ATCC 23344 chromosome 2, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	2029	68.05	5.07	68.81	3.92	52.06	22.19
Burkholderia mallei NCTC 10229 chromosome II, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	2177	68.51	5.10	69.02	3.80	52.84	21.98
Burkholderia mallei NCTC 10229 chromosome I, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	3333	67.88	4.75	68.26	3.93	50.93	19.72
Burkholderia mallei NCTC 10247 chromosome II, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	2376	68.50	5.12	69.08	3.80	54.31	22.96
Burkholderia mallei NCTC 10247 chromosome I, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	3476	67.82	4.82	68.29	3.95	52.05	20.97
Burkholderia mallei SAVP1 chromosome I, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	3455	67.79	4.90	68.25	3.95	51.88	20.32
Burkholderia mallei SAVP1 chromosome II, complete sequence	Human, Animal	Glanders and pneumonia	Host-associated	1734	68.39	5.20	68.97	3.70	54.60	23.43
Burkholderia multivorans ATCC 17616 chromosome 3, complete sequence	Human	Cepacia syndrome	Host-associated	823	65.70	4.76	66.05	4.56	69.62	29.79
Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence	Human	Cepacia syndrome	Host-associated	3084	66.98	4.49	67.21	4.30	51.95	27.86
Burkholderia multivorans ATCC 17616 chromosome 3, complete sequence	Human	Cepacia syndrome	Host-associated	767	66.00	4.52	66.17	4.38	67.39	28.61
Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence	Human	Cepacia syndrome	Host-associated	2152	67.07	4.14	67.33	3.95	52.65	29.26
Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence	Human	Cepacia syndrome	Host-associated	2130	67.12	4.16	67.38	3.97	53.44	31.27
Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence	Human	Cepacia syndrome	Host-associated	3146	66.81	4.63	67.07	4.40	53.01	28.96
Burkholderia pseudomallei 1106a chromosome I, complete sequence	Animal	Melioidosis	Terrestrial	4019	67.62	5.36	68.15	4.18	54.05	24.20
Burkholderia pseudomallei 1106a chromosome II, complete sequence	Animal	Melioidosis	Terrestrial	3164	67.97	6.10	68.78	4.24	57.22	26.44
Burkholderia pseudomallei 1710b chromosome I, complete sequence	Animal	Melioidosis	Terrestrial	3736	67.98	4.40	68.14	4.09	52.74	24.14
Burkholderia pseudomallei 1710b chromosome II, complete sequence	Animal	Melioidosis	Terrestrial	2611	68.61	4.48	68.77	4.09	53.37	25.59
Burkholderia pseudomallei 668 chromosome I, complete sequence	Animal	Melioidosis	Terrestrial	3951	67.59	5.52	68.20	4.28	53.87	24.06
Burkholderia pseudomallei 668 chromosome II, complete sequence	Animal	Melioidosis	Terrestrial	3279	67.81	6.02	68.66	4.24	57.63	26.54
Burkholderia pseudomallei K96243 chromosome 2, complete sequence	Animal	Melioidosis	Terrestrial	2329	68.18	4.66	68.43	4.45	51.92	25.45
Burkholderia pseudomallei K96243 chromosome 1, complete sequence	Animal	Melioidosis	Terrestrial	3399	67.43	4.78	67.73	4.55	53.44	27.31
Burkholderia sp. 383 chromosome 2, complete sequence	Human	Necrotizing pneumonia and chronic infections	Multiple	3174	66.93	3.60	67.12	3.42	44.47	18.12
Burkholderia sp. 383 chromosome 1, complete sequence	Human	Necrotizing pneumonia and chronic infections	Multiple	3334	66.36	4.37	66.57	4.23	47.31	20.76
Burkholderia sp. 383 chromosome 3, complete sequence	Human	Necrotizing pneumonia and chronic infections	Multiple	1209	65.56	4.25	65.76	4.13	52.18	20.28
Burkholderia vietnamiensis G4 chromosome 1, complete sequence	Human	Necrotizing pneumonia and chroninc infections	Multiple	3274	66.40	5.53	66.75	5.27	61.80	34.61
Burkholderia vietnamiensis G4 chromosome 3, complete sequence	Human	Necrotizing pneumonia and chroninc infections	Multiple	1114	66.18	5.21	66.48	5.07	60.74	23.36
Burkholderia vietnamiensis G4 chromosome 2, complete sequence	Human	Necrotizing pneumonia and chroninc infections	Multiple	2096	66.68	4.72	67.02	4.49	54.17	25.83
Burkholderia xenovorans LB400 chromosome 2, complete genome	Human, Plants	Opportunistic infections	Multiple	2960	62.84	4.09	63.14	3.71	44.07	18.83
Burkholderia xenovorans LB400 chromosome 3, complete genome	Human, Plants	Opportunistic infections	Multiple	1312	61.84	4.19	62.07	4.03	52.64	19.26
Burkholderia xenovorans LB400 chromosome 1, complete sequence	Human, Plants	Opportunistic infections	Multiple	4430	62.69	4.41	63.05	4.14	49.34	23.52
Campylobacter concisus 13826, complete genome	Human	Gastroenteritis	Host-associated	1929	39.18	5.26	39.95	4.60	54.11	28.28
Campylobacter curvus 525.92, complete genome	Human	Gastroenteritis, periodontal disease	Host-associated	1931	44.26	5.45	45.17	4.51	46.82	20.85
Campylobacter fetus subsp. fetus 82-40, complete genome	Human, Animal	Infertility, infectious abortions, septicemia, meningitis	Host-associated	1719	33.55	3.71	33.69	3.44	47.36	17.63
Campylobacter jejuni RM1221, complete genome	Human	Food poisoning	Multiple	1838	30.10	3.94	30.42	3.58	48.61	20.90
Campylobacter jejuni subsp. doylei 269.97, complete genome	Human	Bacteremia	Multiple	1731	30.44	3.88	30.79	3.60	49.23	19.44
Campylobacter jejuni subsp. jejuni 81-176, complete genome	Human	Food poisoning	Multiple	1653	30.58	3.77	30.73	3.52	46.63	18.51
Campylobacter jejuni subsp. jejuni 81116, complete genome	Human	Food poisoning	Multiple	1626	30.51	3.72	30.62	3.54	46.46	18.10
Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome	Human	Food poisoning	Multiple	1634	30.55	3.69	30.62	3.49	47.14	19.28
Candidatus Phytoplasma australiense, complete genome	Grapevines		Host-associated	684	28.23	4.24	28.52	3.79	62.76	25.09
Candidatus Phytoplasma mali, complete genome	Plant	Apple proliferation disease	Host-associated	479	22.46	4.02	22.51	3.97	62.15	26.10
Candidatus Protochlamydia amoebophila UWE25, complete genome	Animal	Probable pneumonia agent	Host-associated	2031	35.65	3.38	36.08	2.86	42.68	18.08
Chlamydia muridarum Nigg, complete genome	Human, Animal	Pharyngitis, bronchitis and pneumonitis	Host-associated	904	40.58	2.58	40.75	2.20	38.75	14.38
Chlamydia trachomatis 434/Bu, complete genome	Human	Lymphogranuloma vernerum	Host-associated	874	41.55	2.29	41.63	2.18	39.06	14.73
Chlamydia trachomatis A/HAR-13, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	911	41.51	2.37	41.62	2.22	39.91	14.81
Chlamydia trachomatis D/UW-3/CX, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	895	41.53	2.32	41.62	2.22	39.59	14.53
Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome	Human	Lymphogranuloma vernerum, proctitis	Host-associated	874	41.55	2.30	41.63	2.19	39.00	14.67
Chlamydophila abortus S26/3, complete genome	Human, Animal	Pharyngitis, bronchitis and pneumonitis	Host-associated	932	40.23	2.43	40.35	2.27	37.69	14.89
Chlamydophila caviae GPIC, complete genome	Human, Animal	Pharyngitis, bronchitis and pneumonitis	Host-associated	998	39.42	2.69	39.69	2.22	39.90	14.77
Chlamydophila felis Fe/C-56, complete genome	Human, Animal	Pharyngitis, bronchitis and pneumonitis	Host-associated	1005	39.67	2.66	39.87	2.27	39.99	16.11
Chlamydophila pneumoniae AR39, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	1112	40.53	3.43	41.07	2.56	41.19	16.70
Chlamydophila pneumoniae CWL029, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	1052	40.88	2.78	41.07	2.54	39.89	16.47
Chlamydophila pneumoniae J138, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	1069	40.89	2.77	41.08	2.53	39.87	16.56
Chlamydophila pneumoniae TW-183, complete genome	Human	Pharyngitis, bronchitis and pneumonitis	Host-associated	1113	40.62	3.18	41.05	2.58	40.39	16.41
Chromobacterium violaceum ATCC 12472, complete genome	Human	Diarrhea and occasionally septicemia	Multiple	4407	64.93	6.18	65.52	5.47	51.63	20.01
Citrobacter koseri ATCC BAA-895, complete genome	Human, Animal	Bacteremia, meningoencephalitis, multiple brain abscesses	Multiple	4980	52.94	6.20	54.33	4.79	43.23	19.80
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome	Tomato	Tomato bacterial wilt and canker	Multiple	2984	72.78	3.94	72.95	3.83	50.18	23.50
Clavibacter michiganensis subsp. sepedonicus, complete genome	Plant	Wilt and Tuber Rot, Ring Rot	Multiple	2941	72.30	4.16	72.53	3.92	49.30	21.92
Clostridium botulinum A str. ATCC 19397, complete genome	Human	Botulism	Multiple	3552	28.83	4.03	29.01	3.72	57.54	22.62
Clostridium botulinum A str. ATCC 3502, complete genome	Human	Botulism	Multiple	3572	28.87	3.98	29.03	3.71	57.68	22.97
Clostridium botulinum A str. Hall, complete genome	Human	Botulism	Multiple	3404	28.84	4.00	29.01	3.73	57.42	22.72
Clostridium botulinum A3 str. Loch Maree, complete genome	Human	Botulism	Multiple	3655	28.91	4.01	29.07	3.74	0.00	0.00
Clostridium botulinum B1 str. Okra, complete genome	Human	Botulism	Multiple	3657	28.93	4.02	29.10	3.77	0.00	0.00
Clostridium botulinum E3 str. Alaska E43, complete genome	Human	Botulism	Multiple	3256	27.92	3.61	28.05	3.36	49.51	19.49
Clostridium botulinum F str. Langeland, complete genome	Human	Botulism	Multiple	3635	28.87	4.01	29.06	3.72	57.85	23.18
Clostridium difficile 630, complete genome	Human	Antibiotic-associated diarrhea and pseudomembraneous colitis	Multiple	3742	29.91	4.23	29.83	3.95	53.45	25.42
Clostridium perfringens ATCC 13124, complete genome	Human, Animal	Gas gangrene	Multiple	2876	28.97	3.58	29.10	3.34	53.64	22.16
Clostridium perfringens SM101, complete genome	Human, Animal	Gas gangrene	Multiple	2558	28.85	3.57	28.92	3.41	53.70	22.80
Clostridium phage phiSM101, complete genome	Human, Animal	Gas gangrene	Multiple	53	26.86	2.94	27.81	2.42	66.66	19.75
Clostridium perfringens str. 13, complete genome	Human, Animal	Gas gangrene	Multiple	2660	29.13	3.46	29.18	3.29	53.39	22.68
Clostridium tetani E88, complete genome	Human	Tetanus	Multiple	2373	28.95	3.58	28.95	3.58	51.65	21.12
Corynebacterium diphtheriae NCTC 13129, complete genome	Human	Diphtheria	Multiple	2272	53.75	4.64	53.97	4.49	46.76	20.73
Corynebacterium jeikeium K411, complete genome	Human	Nocosomial infections	Multiple	2104	61.70	3.98	61.92	3.86	40.47	17.04
Corynebacterium urealyticum DSM 7109, complete genome	Human	Urinary tract infection	Host-associated	2024	64.31	4.04	64.57	3.85	0.00	0.00
Coxiella burnetii Dugway 5J108-111, complete genome	Animal, Human	Q-fever	Host-associated	1993	42.75	4.96	42.83	4.06	46.01	18.51
Coxiella burnetii RSA 331, complete genome	Animal, Human	Q fever	Multiple	1930	43.03	4.81	43.26	4.06	46.19	20.74
Coxiella burnetii RSA 493, complete genome	Animal, Human	Q fever	Multiple	2016	42.64	5.06	42.80	4.23	47.40	20.65
Dichelobacter nodosus VCS1703A, complete genome	Animal	Ovine footrot	Host-associated	1280	44.37	4.11	44.69	3.71	54.20	35.19
Ehrlichia canis str. Jake, complete genome	Dog	Ehrlichiosis	Host-associated	925	30.73	2.95	30.71	2.85	44.85	20.08
Ehrlichia chaffeensis str. Arkansas, complete genome	Human, Animal	Monocytic ehrlichiosis	Host-associated	1105	30.45	3.81	31.34	2.91	48.78	22.18
Ehrlichia ruminantium str. Gardel, complete genome	Ruminant	African heartwater	Host-associated	950	30.14	3.39	30.43	2.85	44.63	18.35
Ehrlichia ruminantium str. Welgevonden, complete genome	Ruminant	Heartwater	Host-associated	888	30.51	2.94	30.48	2.86	43.39	18.10
Ehrlichia ruminantium str. Welgevonden, complete genome	Ruminant	Heartwater	Host-associated	958	30.17	3.39	30.49	2.98	44.74	19.12
Enterobacter sakazakii ATCC BAA-894, complete genome	Human	Meningitis, septicemia, necrotizing enterocolitis	Host-associated	4255	56.42	6.28	57.39	5.46	46.12	24.96
Enterococcus faecalis V583, complete genome	Human	Bacteremia, endocarditis, urinary tract infection	Multiple	3113	37.28	4.35	37.73	3.94	49.60	24.09
Escherichia coli 536, complete genome	Human	Urinary tract infection	Host-associated	4620	50.53	5.23	51.11	4.77	46.60	23.27
Escherichia coli APEC O1, complete genome	Avian	Colibacillosis	Host-associated	4428	50.94	4.72	51.11	4.61	43.48	19.40
Escherichia coli CFT073, complete genome	Human	Urinary tract infections	Host-associated	5339	50.18	5.55	51.06	4.79	49.45	24.20
Escherichia coli E24377A, complete genome	Human	Diarrhea	Host-associated	4749	50.48	5.64	51.44	4.66	44.72	19.66
Escherichia coli O157:H7 EDL933, complete genome	Human	Hemorrhagic colitis	Host-associated	5312	50.38	5.88	51.02	5.33	50.92	23.03
Escherichia coli O157:H7 str. EC4115, complete genome	Human	Hemorrhagic colitis	Multiple	5315	50.32	5.97	51.40	5.02	48.84	22.02
Escherichia coli O157:H7 str. Sakai, complete genome	Human	Hemorrhagic colitis	Host-associated	5230	50.61	5.56	51.14	5.29	48.75	22.52
Escherichia coli UTI89, complete genome	Human	Cystitis	Host-associated	5021	50.39	5.20	51.11	4.67	46.28	21.46
Finegoldia magna ATCC 29328, complete genome	Human		Multiple	1631	32.18	3.66	32.25	3.65	0.00	0.00
Flavobacterium psychrophilum JIP02/86, complete genome	Salmonid fish	Cold water disease, rainbow trout fry syndrome	Aquatic	2412	32.65	3.83	32.86	3.70	49.89	21.58
Francisella philomiragia subsp. philomiragia ATCC 25017, complete genome	Human, Animals	Bacteremia, Pneumonia	Multiple	1911	32.71	3.22	32.81	3.14	41.86	15.68
Francisella tularensis subsp. holarctica, complete genome	Human, Animal	Tularemia	Host-associated	1754	32.49	3.39	32.57	3.30	43.62	15.35
Francisella tularensis subsp. holarctica FTNF002-00, complete genome	Human, Animal	Tularemia	Multiple	1580	32.53	3.43	32.72	3.20	42.80	15.32
Francisella tularensis subsp. holarctica OSU18, complete genome	Human, Animal	Tularemia	Multiple	1555	32.50	3.56	32.76	3.26	43.59	15.71
Francisella tularensis subsp. mediasiatica FSC147, complete genome	Human, Animal	Tularemia	Host-associated	1406	32.84	3.41	32.94	3.29	43.09	15.51
Francisella tularensis subsp. tularensis FSC198, complete genome	Human, Animal	Tularemia	Aquatic	1605	32.63	3.37	32.72	3.28	43.56	16.01
Francisella tularensis subsp. tularensis Schu 4, complete genome	Human, Animal	Tularemia	Aquatic	1603	32.63	3.37	32.72	3.28	43.55	15.98
Francisella tularensis subsp. tularensis WY96-3418, complete genome	Mammal	Tularemia	Host-associated	1634	32.58	3.43	32.76	3.27	43.50	15.98
Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome	Human, Animal	Periodontal diseases and some inflammations	Host-associated	2067	26.96	3.77	27.13	3.46	47.17	18.21
Granulibacter bethesdensis CGDNIH1, complete genome	Human	Chronic granulomatous disease	Multiple	2437	59.37	4.89	59.71	4.13	42.35	20.72
Haemophilus ducreyi 35000HP, complete genome	Human	Genital ulcer disease	Host-associated	1717	38.08	4.33	38.64	3.54	48.61	24.39
Haemophilus influenzae 86-028NP, complete genome	Human	Meningitis, speticemia, otitis media, sinusitis, chronic bronchitis	Host-associated	1792	38.35	3.58	38.49	3.32	46.12	20.52
Haemophilus influenzae PittEE, complete genome	Human	Meningitis, septicemia, otitis media, sinusitis, chronic bronchitis	Host-associated	1619	38.10	3.91	38.40	3.41	45.49	21.22
Haemophilus influenzae PittGG, complete genome	Human	Meningitis, septicemia, otitis media, sinusitis, chronic bronchitis	Host-associated	1667	38.07	3.85	38.35	3.43	46.84	20.91
Haemophilus influenzae Rd KW20, complete genome	Human	Meningitis, speticemia, otitis media, sinusitis, chronic bronchitis	Host-associated	1657	38.46	3.50	38.52	3.38	44.22	20.10
Haemophilus somnus 129PT, complete genome	Human, Animal	Pneumonia, arthritis, myocarditis, and reproductive problems	Host-associated	1792	37.21	3.48	37.36	3.30	43.88	19.96
Haemophilus somnus 2336, complete genome	Human, Animal	Pneumonia, arthritis, myocarditis, and reproductive problems	Host-associated	1980	37.49	3.76	37.54	3.60	0.00	0.00
Helicobacter acinonychis str. Sheeba, complete genome	Feline	Gastric lesions	Host-associated	1612	38.39	3.61	38.57	3.22	47.06	22.65
Helicobacter hepaticus ATCC 51449, complete genome	Animal	Hepatitis, typhlitis, hepatocellular tumors, and gastric bowel disease	Host-associated	1875	35.80	3.58	36.22	3.02	43.54	20.49
Helicobacter pylori 26695, complete genome	Human	Gastric inflammation and peptic ulcer disease	Host-associated	1576	39.13	3.75	39.39	3.40	45.51	21.19
Helicobacter pylori HPAG1, complete genome	Human	Gastric ulcer	Host-associated	1536	39.24	3.61	39.57	3.27	43.39	19.29
Helicobacter pylori J99, complete genome	Human	Gastric inflammation and peptic ulcer disease	Host-associated	1489	39.55	3.47	39.73	3.31	44.08	20.61
Helicobacter pylori P12, complete genome	Human	Gastric inflammation and peptic ulcer disease	Host-associated	1567	39.03	3.70	39.33	3.42	46.53	22.91
Helicobacter pylori Shi470, complete genome	Human	Gastric ulcer	Host-associated	1569	38.76	4.11	39.39	3.41	45.88	24.34
Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome	Human, Animal	Pneumonia and urinary tract infections	Multiple	4776	57.88	5.81	58.38	5.40	43.20	18.40
Lawsonia intracellularis PHE/MN1-00, complete genome	Animal	Proliferative enteropathy	Host-associated	1180	34.48	3.07	34.50	3.01	40.33	17.35
Legionella pneumophila str. Corby, complete genome	Human	Legionnaire's disease	Host-associated	3206	38.58	3.46	38.80	3.16	41.07	15.40
Legionella pneumophila str. Lens, complete genome	Animal	Legionnaire's disease	Host-associated	2878	38.75	3.24	38.80	3.12	39.28	15.76
Legionella pneumophila str. Paris, complete genome	Animal	Legionnaire's disease	Host-associated	3027	38.73	3.23	38.81	3.12	39.72	15.05
Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome	Animal	Legionnaire's disease	Host-associated	2942	38.69	3.32	38.72	3.19	39.43	14.97
Leifsonia xyli subsp. xyli str. CTCB07, complete genome	Plant	Ratoon stunting disease	Host-associated	2030	67.97	3.84	68.24	3.60	42.42	19.98
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1, complete sequence	Cattle, Human	Leptospirosis	Host-associated	2645	40.86	3.40	40.89	3.38	43.27	19.77
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence	Cattle, Human	Leptospirosis	Host-associated	235	41.05	2.74	41.14	2.73	41.17	16.19
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence	Cattle, Human	Leptospirosis	Host-associated	2703	40.88	3.43	40.91	3.41	43.54	20.12
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 2, complete sequence	Cattle, Human	Leptospirosis	Host-associated	242	40.96	2.80	41.04	2.80	41.16	16.98
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome I, complete sequence	Animal	Leptospirosis	Host-associated	3394	36.17	3.74	36.47	3.44	46.38	19.41
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome II, complete sequence	Animal	Leptospirosis	Host-associated	264	36.46	3.21	36.43	3.21	42.63	17.29
Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequence	Animal	Leptospirosis	Host-associated	4360	35.02	4.84	36.42	3.47	50.73	21.26
Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequence	Animal	Leptospirosis	Host-associated	367	35.09	4.66	36.53	3.11	47.88	21.86
Listeria monocytogenes EGD-e, complete genome	Human	Listeriosis	Multiple	2846	38.00	3.37	38.12	3.23	45.37	20.61
Listeria monocytogenes str. 4b F2365, complete genome	Human	Listeriosis	Multiple	2821	37.91	3.60	38.22	3.25	45.56	20.39
Lysinibacillus sphaericus C3-41, complete genome	Mosquito	Larvicidal toxin	Specialized	4584	37.44	3.73	37.92	3.24	0.00	0.00
Mesoplasma florum L1, complete genome	Mammal, Insect, Plant		Host-associated	682	26.81	3.79	26.74	3.74	44.35	18.30
Microcystis aeruginosa NIES-843, complete genome	Animal, Human	Cyanobacterial hepatotoxicosis, gastroenteritis, skin irritation	Aquatic	6312	42.55	5.41	42.77	5.29	57.12	24.94
Mycobacterium abscessus chromosome Chromosome, complete sequence	Human	Lung, skin, and wound infections	Multiple	4920	64.32	2.97	64.44	2.83	0.00	0.00
Mycobacterium avium 104, complete genome	Mammal	Tuberculosis type pulmonary infections	Host-associated	5120	68.90	3.75	69.19	3.50	42.33	16.30
Mycobacterium avium subsp. paratuberculosis K-10, complete genome	Mammal	Paratuberculosis	Multiple	4350	69.39	3.47	69.49	3.37	39.84	13.96
Mycobacterium bovis AF2122/97, complete genome	Human, Animal	Tuberculosis in cattle	Host-associated	3920	65.47	3.40	65.58	3.33	42.09	20.20
Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome	Bovine	Bovine tuberculosis	Host-associated	3952	65.45	3.42	65.57	3.33	41.90	20.26
Mycobacterium leprae TN, complete genome	Human	Leprosy	Host-associated	1605	59.70	3.21	59.95	2.93	34.26	12.69
Mycobacterium marinum M, complete genome	Fish, Human	Tuberculosis-like infection in fish, Skin infection, arthritis in human	Multiple	5423	65.55	3.32	65.72	3.22	43.69	21.36
Mycobacterium smegmatis str. MC2 155, complete genome	Human	Soft tissue lesions	Host-associated	6716	67.48	3.10	67.73	2.80	40.77	14.95
Mycobacterium tuberculosis CDC1551, complete genome	Human	Tuberculosis	Host-associated	4189	65.22	3.49	65.48	3.29	42.54	20.68
Mycobacterium tuberculosis F11, complete genome	Human	Tuberculosis	Host-associated	3941	65.47	3.40	65.57	3.35	41.86	20.33
Mycobacterium tuberculosis H37Ra, complete genome	Human	Tuberculosis (attenuated)	Host-associated	4034	65.43	3.37	65.56	3.30	41.98	19.71
Mycobacterium tuberculosis H37Rv, complete genome	Human	Tuberculosis	Host-associated	3989	65.47	3.39	65.58	3.32	42.21	20.12
Mycobacterium ulcerans Agy99, complete genome	Human	Buruli ulcer	Host-associated	4160	65.34	3.10	65.49	2.98	37.59	14.56
Mycoplasma agalactiae PG2, complete genome	Sheep, Goat	Mastitis, arthritis, and pneumonia	Host-associated	742	30.04	2.93	30.00	2.80	47.22	21.30
Mycoplasma arthritidis 158L3-1, complete genome	Rodent	Acute rat polyarthritis and murine chronic proliferative arthritis	Host-associated	631	31.28	3.34	31.30	3.20	49.04	24.90
Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome	Ruminant	Severe arthritis and septicemia	Host-associated	812	24.05	4.02	23.98	3.95	50.42	25.72
Mycoplasma gallisepticum R, complete genome	Avian	Chronic respiratory diseases	Host-associated	726	31.67	3.23	31.65	3.15	52.74	22.11
Mycoplasma genitalium G37, complete genome	Human, Animal, Insect	Urogenital or respiratory tract infections	Host-associated	477	31.58	3.61	31.43	3.49	47.70	18.74
Mycoplasma hyopneumoniae 232, complete genome	Swine	Swine mycoplasmosis	Host-associated	691	29.13	4.26	29.27	4.05	46.37	19.00
Mycoplasma hyopneumoniae 7448, complete genome	Swine	Enzootic pneumonia	Host-associated	663	29.19	4.17	29.17	4.07	44.84	17.10
Mycoplasma hyopneumoniae J, complete genome	Swine	Enzootic pneumonia	Host-associated	665	29.24	4.17	29.25	4.05	46.22	20.24
Mycoplasma mobile 163K, complete genome	Fish	None	Host-associated	633	25.29	3.59	25.21	3.48	45.05	16.32
Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome	Cattle	Contagious bovine pleuropneumonia (CBPP)	Host-associated	1016	23.80	3.70	23.87	3.60	48.28	18.65
Mycoplasma penetrans HF-2, complete genome	Human	Urogenital or respiratory tract infections	Host-associated	1037	26.11	3.47	26.12	3.29	50.93	21.74
Mycoplasma pneumoniae M129, complete genome	Human	Atypical pneumonia in older children and young adults	Host-associated	689	40.26	4.85	40.29	4.89	49.59	20.39
Mycoplasma pulmonis UAB CTIP, complete genome	Rodent	Respiratory mycoplasmosis	Host-associated	782	27.05	4.11	27.14	3.82	46.64	19.74
Mycoplasma synoviae 53, complete genome	Chicken	Chronic respiratory disease in chicken	Host-associated	672	28.74	4.56	28.70	4.50	65.25	31.35
Neisseria gonorrhoeae FA 1090, complete genome	Human	Gonorrhea	Host-associated	2002	52.66	6.57	53.49	5.96	48.79	24.13
Neisseria gonorrhoeae NCCP11945, complete genome	Human	Gonorrhea	Host-associated	2662	51.65	6.98	53.38	5.72	54.24	27.55
Neisseria meningitidis 053442, complete genome	Human	Meningitis and septicemia	Host-associated	2020	51.53	7.05	52.62	6.29	50.41	28.57
Neisseria meningitidis FAM18, complete genome	Human	Meningitis and septicemia	Host-associated	1917	51.80	7.07	52.56	6.35	50.51	29.77
Neisseria meningitidis MC58, complete genome	Human	Meningitis and septicemia	Host-associated	2063	51.38	7.55	52.42	6.86	54.12	31.12
Neisseria meningitidis Z2491, complete genome	Human	Meningitis and septicemia	Host-associated	2049	51.77	7.09	52.75	6.41	50.70	27.77
Neorickettsia sennetsu str. Miyayama, complete genome	Human	Sennetsu fever	Multiple	932	41.12	3.36	41.55	2.72	39.27	15.42
Nocardia farcinica IFM 10152, complete genome	Human, Animal	Nocardiosis	Multiple	5683	70.70	3.45	70.92	3.30	42.28	15.63
Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence	Human	Opportunistic infections	Terrestrial	2731	56.62	3.41	56.84	3.23	42.09	20.14
Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence	Human	Opportunistic infections	Terrestrial	1693	56.82	3.57	56.92	3.36	40.99	19.51
Onion yellows phytoplasma OY-M, complete genome	Onion	Onions yellow disease	Host-associated	754	28.56	4.59	28.58	4.45	76.99	27.59
Orientia tsutsugamushi Boryong, complete genome	Human	Scrub typhus	Host-associated	1182	30.84	3.12	31.04	2.91	47.22	18.08
Orientia tsutsugamushi str. Ikeda, complete genome	Human	Scrub typhus	Host-associated	1967	31.48	3.15	31.51	3.10	50.89	18.42
Parabacteroides distasonis ATCC 8503, complete genome	Mammal	Opportunistic peritoneal diseases	Host-associated	3850	45.44	5.37	45.65	5.27	46.86	23.51
Pasteurella multocida subsp. multocida str. Pm70, complete genome	Human, Animal	Pasteurellosis	Host-associated	2015	40.66	3.39	40.77	3.31	41.63	21.50
Erwinia carotovora subsp. atroseptica SCRI1043, complete genome	Plant	Soft rot disease of potatoes	Multiple	4472	51.14	5.41	51.61	5.04	42.48	19.47
Phenylobacterium zucineum HLK1, complete genome	Human		Host-associated	3529	71.49	3.26	71.62	3.12	42.24	15.59
Photorhabdus luminescens subsp. laumondii TTO1, complete genome	Insect	Toxemia and septicemia	Host-associated	4683	43.10	5.83	43.19	5.78	48.00	19.82
Porphyromonas gingivalis ATCC 33277, complete genome	Human	Periodontal disease	Host-associated	2090	48.47	4.89	49.27	4.44	41.98	18.36
Porphyromonas gingivalis W83, complete genome	Human	Periodontal disease	Host-associated	1909	48.73	4.83	49.22	4.62	41.62	18.98
Propionibacterium acnes KPA171202, complete genome	Human	Acne	Host-associated	2297	60.05	3.20	60.22	3.03	38.19	15.57
Proteus mirabilis HI4320, complete genome	Human	Encephalitis, urinary tract infections, surgical wound infections, pyelonephritis, pneumonia, septicemia	Host-associated	3607	39.69	4.91	39.89	4.65	46.88	21.85
Pseudoalteromonas atlantica T6c, complete genome	Shellfish	Shell disease	Aquatic	4281	45.02	2.89	45.13	2.81	38.84	16.40
Pseudomonas aeruginosa PA7, complete genome	Human	Opportunistic infections	Multiple	6286	66.39	5.05	67.07	4.20	45.43	17.62
Pseudomonas aeruginosa PAO1, complete genome	Human	Opportunistic infections	Multiple	5566	66.74	3.97	66.95	3.79	42.31	16.39
Pseudomonas aeruginosa UCBPP-PA14, complete genome	Human, Animal, Plant	Opportunistic infections	Multiple	5892	66.46	4.33	66.73	4.12	43.68	17.32
Pseudomonas entomophila L48, complete genome	Insect	Cellular destruction	Multiple	5134	64.12	4.52	64.56	4.03	45.69	20.56
Pseudomonas mendocina ymp, complete genome	Human	Spondylodiscitis (rare)	Multiple	4594	64.78	4.15	65.01	4.05	47.90	20.42
Pseudomonas syringae pv. phaseolicola 1448A, complete genome	Plant	Plant rot	Multiple	4984	58.31	3.76	58.57	3.58	39.91	15.91
Pseudomonas syringae pv. syringae B728a, complete genome	Plant	Plant rot	Multiple	5089	59.35	4.19	59.59	4.04	41.93	17.52
Pseudomonas syringae pv. tomato str. DC3000, complete genome	Plant	Plant rot	Multiple	5475	58.61	4.14	58.96	3.93	42.38	16.45
Ralstonia solanacearum GMI1000, complete genome	Plant	Plant rot	Multiple	3440	66.98	4.55	67.29	4.23	48.54	19.49
Renibacterium salmoninarum ATCC 33209, complete genome	Salmonid fish	Bacterial kidney disease (BKD)	Host-associated	3507	56.28	2.77	56.49	2.38	38.56	14.73
Rickettsia akari str. Hartford, complete genome	Human	Rickettsialpox	Host-associated	1259	31.80	4.23	32.44	3.65	49.83	23.16
Rickettsia canadensis str. McKiel, complete genome	Human	Epidemic typhus	Host-associated	1093	31.03	4.11	31.52	3.53	47.82	23.58
Rickettsia conorii str. Malish 7, complete genome	Human	Rocky Mountain Spotted Fever	Host-associated	1374	32.03	4.13	32.38	3.78	49.03	21.33
Rickettsia felis URRWXCal2, complete genome	Human, Feline	Spotted-fever like illness	Host-associated	1400	32.00	3.85	32.19	3.79	49.49	21.08
Rickettsia prowazekii str. Madrid E, complete genome	Human	Louse-borne typhus, Mediterranean spotted fever, epidemic typhus	Host-associated	835	30.02	3.38	30.15	3.28	40.33	17.42
Rickettsia rickettsii str. 'Sheila Smith', complete genome	Human	Rocky Mountain Spotted Fever	Host-associated	1345	32.02	4.40	32.50	3.69	50.49	22.60
Rickettsia rickettsii str. Iowa, complete genome	Human	Rocky Mountain Spotted Fever	Host-associated	1384	31.95	4.51	32.49	3.68	51.12	22.78
Rickettsia typhi str. Wilmington, complete genome	Human, Rodent	Endemic typhus and murine typhus	Host-associated	838	29.88	3.61	30.16	3.42	39.71	16.63
Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete genome	Human, Animal	Gastroenteritis	Host-associated	4498	51.15	6.23	52.12	5.35	48.67	25.86
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome	Human, Animal	Gastroenteritis	Multiple	4562	51.63	6.48	52.82	5.21	45.21	22.39
Salmonella enterica subsp. enterica serovar Choleraesuis str SC-B67, complete genome	Human, Animal	Salmonellosis and swine paratyphoid	Host-associated	4413	52.01	5.72	52.68	5.09	44.96	22.09
Salmonella enterica subsp. enterica serovar Dublin str CT_02021853, complete genome	Human, Animal	Bacteremia, gastroenteritis	Multiple	4514	51.79	6.18	52.93	5.01	46.07	22.62
Salmonella enterica subsp. enterica serovar Enteritidis str P125109, complete genome	Human, Animals	Salmonellosis	Specialized	4206	52.44	5.35	52.78	5.18	43.70	21.71
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91, complete genome	Poultry	Fowl typhoid	Multiple	3965	52.55	5.27	52.90	5.08	43.23	21.97
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, complete genome	Human, Animal	Gastroenteritis	Multiple	4650	51.70	6.20	52.82	5.09	46.66	23.43
Salmonella enterica enterica sv Newport str. SL254, complete sequence	Human, Animal	Gastroenteritis	Multiple	190	52.95	5.39	53.21	5.21	59.42	21.63
Salmonella enterica subsp. enterica serovar Newport str. SL254, complete genome	Human, Animal	Gastroenteritis	Multiple	4612	51.87	6.14	52.97	4.94	45.14	21.49
Salmonella enterica subsp. enterica serovar Paratyphi A str AKU_12601, complete genome	Human	Paratyphoid fever	Multiple	4078	52.30	5.52	52.83	5.14	44.67	23.07
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, complete genome	Human	Paratyphoid fever	Host-associated	4093	52.30	5.58	52.84	5.19	44.60	23.10
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, complete genome	Human	Typhoid-like disease	Host-associated	5592	50.59	6.97	52.78	4.99	49.84	25.41
Salmonella enterica subsp. enterica serovar Schwarzengrund str CVM19633, complete genome	Human, Animal	Gastroenteritis	Multiple	4500	51.77	6.10	52.91	4.97	46.60	24.41
Salmonella enterica subsp. enterica serovar Typhi str. CT18, complete genome	Human	Typhoid fever	Host-associated	4395	52.17	5.59	52.72	5.18	48.21	26.25
Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome	Human	Typhoid fever	Host-associated	4318	52.24	5.57	52.77	5.16	47.66	26.08
Salmonella typhimurium LT2, complete genome	Human	Gastroenteritis and food poisoning	Host-associated	4423	52.44	5.35	52.80	5.16	44.53	21.26
Serratia proteamaculans 568, complete genome	Human	Pneumonia	Multiple	4891	55.62	4.71	55.97	4.54	41.36	17.28
Shewanella oneidensis MR-1, complete genome	Human	Rare opportunistic pathogen of humans	Multiple	4318	46.33	3.81	46.58	3.62	42.26	18.14
Shewanella putrefaciens CN-32, complete genome	Human	Soft tissue infections	Multiple	3972	44.78	3.68	44.94	3.60	41.85	17.18
Shewanella sp. W3-18-1, complete genome	Human	Soft tissue infections	Multiple	4044	45.00	3.71	45.16	3.62	43.07	18.09
Shigella boydii CDC 3083-94, complete genome	Human	Dysentery	Host-associated	4246	51.32	4.53	52.04	3.87	43.32	17.52
Shigella boydii Sb227, complete genome	Human	Dysentery	Host-associated	4134	51.65	4.17	52.02	3.96	43.10	17.12
Shigella dysenteriae Sd197, complete genome	Human	Dysentery	Host-associated	4271	51.49	3.86	51.93	3.62	41.96	16.30
Shigella flexneri 2a str. 2457T, complete genome	Human	Dysentery	Host-associated	4061	51.60	4.04	51.82	3.92	43.60	18.60
Shigella flexneri 2a str. 301, complete genome	Human	Dysentery	Host-associated	4177	51.36	4.22	51.56	4.13	43.53	18.45
Shigella flexneri 5 str. 8401, complete genome	Human	Dysentery	Host-associated	4115	51.34	4.18	51.63	4.05	42.69	17.26
Shigella sonnei Ss046, complete genome	Human	Dysentery	Host-associated	4219	51.65	4.20	51.93	3.99	42.45	16.71
Staphylococcus aureus RF122, complete genome	Human, Animal	Mastitis	Host-associated	2509	33.03	3.30	33.23	3.01	49.18	22.48
Staphylococcus aureus subsp. aureus COL, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2615	32.84	3.60	33.17	3.07	51.00	24.65
Staphylococcus aureus subsp. aureus JH1, complete genome	Human, Animal	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2747	33.01	3.38	33.30	3.00	53.03	25.25
Staphylococcus aureus subsp. aureus JH9, complete genome	Human, Animal	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2697	33.08	3.28	33.29	3.01	52.74	25.16
Staphylococcus aureus subsp. aureus MRSA252, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2656	32.95	3.41	33.19	3.05	51.72	24.46
Staphylococcus aureus subsp. aureus MSSA476, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2579	32.94	3.41	33.19	3.05	50.96	23.75
Staphylococcus aureus subsp. aureus Mu3, complete genome	Human	Variety of infections	Host-associated	2698	33.04	3.32	33.24	3.04	52.49	25.81
Staphylococcus aureus subsp. aureus Mu50, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2697	33.03	3.33	33.24	3.04	52.33	25.53
Staphylococcus aureus subsp. aureus MW2, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2632	32.85	3.41	33.13	3.10	51.62	24.34
Staphylococcus aureus subsp. aureus N315, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2588	33.01	3.29	33.21	3.00	51.35	25.45
Staphylococcus aureus subsp. aureus NCTC 8325, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2892	32.73	3.85	33.22	3.10	53.34	24.69
Staphylococcus aureus subsp. aureus str. Newman, complete genome	Human, Animal	Skin infections, pneumonia, endocarditis		2614	33.06	3.31	33.21	3.07	51.40	24.52
Staphylococcus aureus subsp. aureus USA300, complete genome	Human	Septicemia, pneumonia	Host-associated	2560	33.01	3.27	33.17	3.07	51.10	24.29
Staphylococcus aureus subsp. aureus USA300_TCH1516, complete genome	Human	Septicemia, pneumonia	Host-associated	2657	32.63	3.73	33.14	3.07	51.90	23.75
Staphylococcus epidermidis ATCC 12228, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2419	32.28	3.83	32.77	3.24	48.12	21.72
Staphylococcus epidermidis RP62A, complete genome	Human	Toxic-shock syndrome and staphylococcal scarlet fever	Host-associated	2494	32.10	3.66	32.73	3.04	50.66	24.84
Staphylococcus haemolyticus JCSC1435, complete genome	Human	Wide range of opportunistic infections	Host-associated	2676	32.76	3.62	33.11	3.21	52.32	24.77
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305, complete genome	Human	Urinary tract infections	Host-associated	2446	33.45	3.29	33.78	3.02	45.85	20.43
Stenotrophomonas maltophilia K279a, complete genome	Human	Blood, respiratory, and urinary infections	Multiple	4386	66.37	3.55	66.55	3.43	50.41	22.77
Streptococcus agalactiae 2603V/R, complete genome	Human	Septicemia, pneumonia, and meningitis	Host-associated	2124	35.44	3.78	35.81	3.31	47.62	23.19
Streptococcus agalactiae A909, complete genome	Human	Septicemia, pneumonia, and meningitis	Host-associated	1996	35.66	3.56	35.81	3.39	46.42	22.40
Streptococcus agalactiae NEM316, complete genome	Human	Neonatal GBS meningitis	Host-associated	2094	35.67	3.51	35.72	3.40	46.90	22.39
Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome	Animals, Human	Opportunistic infections	Host-associated	1893	41.87	4.13	42.31	3.77	47.14	23.37
Streptococcus gordonii str. Challis substr. CH1, complete genome	Human	Caries and periodontal diseases	Host-associated	2051	40.50	4.81	40.93	4.57	45.76	22.88
Streptococcus mutans UA159, complete genome	Human	Dental caries	Host-associated	1960	37.10	3.90	37.30	3.61	44.01	19.24
Streptococcus pneumoniae CGSP14, complete genome	Human	Pneumonia	Multiple	2206	39.55	4.71	40.08	4.43	48.65	23.54
Streptococcus pneumoniae D39, complete genome	Human	Pneumonia	Multiple	1914	40.03	4.59	40.50	4.32	47.68	22.19
Streptococcus pneumoniae G54, complete genome	Human	Pneumonia	Host-associated	2115	39.82	4.59	40.39	4.26	50.63	22.83
Streptococcus pneumoniae Hungary19A-6, complete genome	Human	Pneumonia	Multiple	2155	39.69	4.67	40.28	4.34	0.00	0.00
Streptococcus pneumoniae R6, complete genome	Human	Pneumonia	Multiple	2043	39.86	4.53	40.38	4.29	48.09	22.73
Streptococcus pneumoniae TIGR4, complete genome	Human	Pneumonia, Meningitis, Bacteremia, Sinusitis, Otitis media, Conjunctivitis	Multiple	2105	39.46	5.02	40.32	4.39	49.40	24.23
Streptococcus pyogenes M1 GAS, complete genome	Human	Wide range of infections	Host-associated	1697	38.64	3.66	38.86	3.56	47.38	21.85
Streptococcus pyogenes MGAS10270, complete genome	Human	Wide range of infections	Host-associated	1986	38.31	3.96	38.66	3.70	51.00	23.02
Streptococcus pyogenes MGAS10394, complete genome	Human	Wide range of infections	Host-associated	1886	38.65	3.80	38.99	3.53	49.11	22.38
Streptococcus pyogenes MGAS10750, complete genome	Human	Wide range of infections	Host-associated	1979	38.26	4.07	38.62	3.76	51.60	25.48
Streptococcus pyogenes MGAS2096, complete genome	Human	Wide range of infections	Host-associated	1898	38.64	4.01	39.02	3.69	48.99	22.30
Streptococcus pyogenes MGAS315, complete genome	Human	Wide range of infections	Host-associated	1865	38.60	3.72	38.85	3.56	50.19	22.73
Streptococcus pyogenes MGAS5005, complete genome	Human	Wide range of infections	Host-associated	1865	38.53	3.79	38.84	3.53	49.71	23.84
Streptococcus pyogenes MGAS6180, complete genome	Human	Wide range of infections	Host-associated	1894	38.26	3.98	38.59	3.77	50.51	24.05
Streptococcus pyogenes MGAS8232, complete genome	Human	Wide range of infections	Host-associated	1839	38.53	3.79	38.85	3.56	49.34	22.87
Streptococcus pyogenes MGAS9429, complete genome	Human	Wide range of infections	Host-associated	1877	38.31	3.95	38.80	3.54	49.56	22.84
Streptococcus pyogenes NZ131, complete genome	Human	Wide range of infections	Host-associated	1700	38.61	3.77	38.88	3.59	48.64	22.96
Streptococcus pyogenes SSI-1, complete genome	Human	Wide range of infections	Host-associated	1861	38.53	3.74	38.84	3.53	50.20	23.03
Streptococcus pyogenes str. Manfredo, complete genome	Human	Wide range of infections	Host-associated	1745	38.65	3.69	38.95	3.50	48.83	22.89
Streptococcus sanguinis SK36, complete genome	Human	Endocarditis	Host-associated	2270	43.54	4.77	43.98	4.50	45.52	21.66
Streptococcus suis 05ZYH33, complete genome	Swine, Human	Meningitis, endocarditis, septicemia and arthritis	Multiple	2186	41.20	4.62	41.64	4.33	47.63	21.72
Streptococcus suis 98HAH33, complete genome	Swine, Human	Meningitis, endocarditis, septicemia and arthritis	Specialized	2185	41.07	4.59	41.46	4.34	47.80	22.00
Thermobifida fusca YX, complete genome	Human	Mushroom worker's disease, farmer's lung disease	Multiple	3110	67.65	3.42	67.86	3.26	44.02	17.71
Treponema denticola ATCC 35405, complete genome	Human	Periodontal disease, gum inflamation	Host-associated	2767	37.25	5.76	37.80	5.31	55.64	26.51
Treponema pallidum subsp. pallidum SS14, complete genome	Human	Syphilis	Host-associated	1028	52.88	4.36	52.82	4.26	43.89	16.78
Treponema pallidum subsp. pallidum str. Nichols, complete genome	Human	Syphilis	Host-associated	1036	52.88	4.31	52.86	4.22	44.12	16.79
Tropheryma whipplei str. Twist, complete genome	Human	Whipple's disease	Host-associated	808	46.62	3.15	46.59	3.00	40.90	20.27
Tropheryma whipplei TW08/27, complete genome	Human	Whipple's disease	Host-associated	783	46.60	3.15	46.52	3.01	41.47	21.13
Ureaplasma parvum serovar 3 str. ATCC 27815, complete genome	Human, Animal	Urogenital or respiratory tracts infections	Host-associated	609	25.81	3.92	25.79	3.78	0.00	0.00
Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome	Animal	Urogenital or respiratory tracts infections	Host-associated	614	25.85	3.84	25.78	3.76	50.61	22.06
Ureaplasma urealyticum serovar 10 str. ATCC 33699, complete genome	Human	Urogenital or respiratory tracts infections	Host-associated	646	26.29	3.81	26.26	3.72	52.05	22.60
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete sequence	Human, Primate	Cholera	Aquatic	1093	45.97	4.79	46.88	4.29	46.07	20.34
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence	Human, Primate	Cholera	Aquatic	2742	47.43	4.26	48.09	3.65	44.80	20.59
Vibrio cholerae O395 chromosome 1, complete sequence	Human, Primate	Cholera	Aquatic	1133	46.24	4.66	47.01	4.29	47.49	23.56
Vibrio cholerae O395 chromosome 2, complete sequence	Human, Primate	Cholera	Aquatic	2742	47.83	3.88	48.22	3.55	44.38	20.06
Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence	Vertebrate and invertebrate aquatic organisms	Vibriosis	Aquatic	2374	45.03	3.78	45.86	2.96	45.67	16.46
Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome	Vertebrate and invertebrate aquatic organisms	Vibriosis	Aquatic	3546	45.58	3.31	45.99	2.82	46.81	18.33
Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete sequence	Human	Gastroenteritis	Aquatic	3080	45.42	3.45	45.92	2.97	46.82	21.29
Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete sequence	Human	Gastroenteritis	Aquatic	1752	45.47	3.83	46.08	3.33	43.85	20.13
Vibrio vulnificus CMCP6 chromosome II, complete sequence	Human	Gastroenteritis, wound infections, primary septicemia	Aquatic	1557	47.71	3.40	47.96	3.22	42.13	19.71
Vibrio vulnificus CMCP6 chromosome I, complete genome	Human	Gastroenteritis, wound infections, primary septicemia	Aquatic	2915	46.93	3.43	47.14	3.25	46.27	22.38
Vibrio vulnificus YJ016 chromosome I, complete sequence	Human	Gastroenteritis, wound infections, primary septicemia	Aquatic	3259	46.28	4.03	46.75	3.71	47.83	22.24
Vibrio vulnificus YJ016 chromosome II, complete sequence	Human	Gastroenteritis, wound infections, primary septicemia	Aquatic	1696	47.10	4.03	47.74	3.34	41.09	15.90
Xanthomonas axonopodis pv. citri str. 306, complete genome	Plant	Citrus canker	Host-associated	4312	64.79	3.85	64.92	3.79	49.88	22.39
Xanthomonas campestris pv. campestris str. 8004, complete genome	Plant	Black rot and citrus canker	Host-associated	4273	65.18	4.26	65.36	4.19	50.84	22.34
Xanthomonas campestris pv. campestris str. ATCC 33913, complete genome	Plant	Black rot	Host-associated	4181	65.33	4.08	65.50	4.01	49.78	21.25
Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome	Plant	Bacterial spot	Host-associated	4487	64.66	3.90	64.93	3.71	50.08	21.35
Xanthomonas oryzae pv. oryzae KACC10331, complete genome	Rice	Rice bacterial blight disease	Host-associated	4144	63.81	3.50	64.01	3.30	45.53	17.93
Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome	Rice	Rice bacterial blight disease	Host-associated	4372	63.74	3.69	63.85	3.65	46.23	18.06
Xanthomonas oryzae pv. oryzae PXO99A, complete genome	Rice	Rice bacterial blight disease	Host-associated	4988	63.70	3.77	64.16	3.32	49.05	20.40
Xylella fastidiosa 9a5c, complete genome	Plant	Citrus variegated chlorosis	Host-associated	2766	52.19	6.22	53.41	5.41	54.23	23.96
Xylella fastidiosa M12, complete genome	Citrus	Citrus variegated chlorosis	Host-associated	2104	52.30	5.14	52.81	4.67	0.00	0.00
Xylella fastidiosa Temecula1, complete genome	Plant	Black rot and citrus canker	Host-associated	2034	52.22	5.17	52.50	4.88	49.62	22.11
Yersinia enterocolitica subsp. enterocolitica 8081, complete genome	Human, Animal	Gastroenteritis	Multiple	3979	47.74	4.70	47.97	4.58	42.70	19.73
Yersinia pestis Angola, complete genome	Human, Rodent	Bubonic plague	Multiple	3832	47.59	5.21	48.49	4.20	41.32	17.38
Yersinia pestis Antiqua, complete genome	Human, Animal	Bubonic plague	Multiple	4167	48.01	4.91	48.39	4.58	41.94	17.54
Yersinia pestis biovar Microtus str. 91001, complete genome	Human, Rodent	Bubonic plague	Multiple	3891	47.78	5.00	48.30	4.62	41.16	17.95
Yersinia pestis CO92, complete genome	Human, Rodent	Bubonic plague	Multiple	3885	47.92	4.90	48.30	4.65	41.46	17.90
Yersinia pestis KIM, complete genome	Human, Rodent	Bubonic plague	Multiple	4086	47.98	5.00	48.33	4.60	42.12	18.25
Yersinia pestis Nepal516, complete genome	Human, Animal	Bubonic Plague	Multiple	3981	47.91	4.91	48.30	4.58	41.54	17.96
Yersinia pestis Pestoides F, complete genome	Human, Rodent	Bubonic plague	Multiple	3850	48.06	4.80	48.42	4.47	40.86	17.58
Yersinia pseudotuberculosis IP 31758, complete genome	Human, Animal	Gastroenteritis	Multiple	4124	47.59	5.41	48.27	4.71	41.64	18.03
Yersinia pseudotuberculosis IP 32953, complete genome	Human, Animal	Gastroenteritis	Multiple	3901	48.01	4.97	48.26	4.82	41.63	19.05
Yersinia pseudotuberculosis PB1/+, complete genome	Human	Gastroenteritis	Multiple	4150	47.60	5.37	48.21	4.89	42.93	19.98
Yersinia pseudotuberculosis YPIII, complete genome	Human	Gastroenteritis	Multiple	4192	47.68	5.19	48.27	4.71	0.00	0.00

Bacteria that are primarily non-pathogenic

Organism	Habitat	No. of protein coding ORFs	%G+C Mean (all ORFs)	%G+C S.D. (all ORFs)	%G+C Mean (ORFs >300bp)	%G+C S.D. (ORFs >300bp)	Genome Dinucleotide Bias Mean	Genome Dinucleotide Bias S.D.	Graphical analysis
Acaryochloris marina MBIC11017, complete genome	Aquatic	6254	47.38	4.45	48.17	3.76	41.53	16.50
Acholeplasma laidlawii PG-8A, complete genome	Specialized	1380	31.96	2.88	31.95	2.72	46.11	19.30
Acidiphilium cryptum JF-5, complete genome	Multiple	3063	68.17	5.03	68.36	4.89	51.36	21.44
Acidithiobacillus ferrooxidans ATCC 53993, complete genome	Specialized	2826	58.78	5.19	59.21	4.93	45.34	18.31
Acidobacteria bacterium Ellin345, complete genome		4777	58.57	2.67	58.68	2.57	37.83	13.55
Acidothermus cellulolyticus 11B, complete genome	Aquatic	2157	66.74	3.40	66.83	3.32	41.72	16.99
Acidovorax sp. JS42, complete genome	Terrestrial	4007	66.47	4.71	66.68	4.60	57.39	24.12
Actinobacillus succinogenes 130Z, complete genome	Host-associated	2079	45.47	4.33	45.67	4.22	45.16	24.90
Akkermansia muciniphila ATCC BAA-835, complete genome	Host-associated	2138	56.11	4.78	56.32	4.66	37.24	14.74
Alcanivorax borkumensis SK2, complete genome	Aquatic	2755	54.83	3.73	55.01	3.62	39.20	15.19
Alkalilimnicola ehrlichei MLHE-1, complete genome	Aquatic	2865	67.38	4.14	67.59	3.98	44.37	18.10
Alkaliphilus metalliredigens QYMF, complete genome		4625	36.81	3.99	37.08	3.81	49.04	20.33
Alkaliphilus oremlandii OhILAs, complete genome	Aquatic	2836	36.54	3.90	36.73	3.82	46.44	20.58
Alteromonas macleodii 'Deep ecotype', complete genome	Aquatic	4072	44.90	3.40	45.43	2.82	46.00	20.44
Anabaena variabilis ATCC 29413, complete genome	Multiple	5043	42.19	4.00	42.31	3.92	39.77	15.24
Anaeromyxobacter dehalogenans 2CP-C, complete genome	Terrestrial	4346	74.55	4.53	74.72	4.44	50.47	19.22
Anaeromyxobacter sp. Fw109-5, complete genome	Terrestrial	4466	73.23	3.77	73.41	3.65	45.99	18.39
Anaeromyxobacter sp. K, complete genome	Terrestrial	4457	74.54	4.42	74.74	4.26	49.65	18.62
Aquifex aeolicus VF5, complete genome	Specialized	1529	43.45	3.70	43.46	3.71	39.02	17.68
Azoarcus sp. EbN1, complete genome	Terrestrial	4133	64.74	4.42	65.23	3.97	54.93	22.21
Arthrobacter aurescens TC1, complete genome	Terrestrial	4041	62.44	2.70	62.59	2.53	36.27	13.42
Arthrobacter sp. FB24 chromosome 1, complete sequence		4146	65.58	3.19	65.73	3.07	37.32	13.96
Azoarcus sp. BH72, complete genome	Host-associated	3989	67.83	4.13	68.03	3.95	46.42	18.05
Azorhizobium caulinodans ORS 571, complete genome	Host-associated	4717	67.41	3.33	67.55	3.22	41.07	17.98
Bacillus amyloliquefaciens FZB42, complete genome	Terrestrial	3693	46.32	4.77	46.81	4.46	45.01	24.22
Bacillus clausii KSM-K16, complete genome		4096	44.68	4.04	44.89	3.93	44.23	24.39
Bacillus halodurans C-125, complete genome	Multiple	4066	43.66	3.70	44.03	3.37	39.33	16.73
Bacillus pumilus SAFR-032, complete genome	Terrestrial	3681	41.07	3.65	41.55	3.25	41.37	19.58
Bacillus subtilis subsp. subtilis str. 168, complete genome		4105	43.31	4.61	43.78	4.34	47.78	25.51
Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome	Host-associated	595	34.06	3.47	34.14	3.29	41.16	17.16
Beijerinckia indica subsp. indica ATCC 9039, complete genome		3569	57.87	4.17	58.11	4.02	0.00	0.00
Bifidobacterium adolescentis ATCC 15703, complete genome	Host-associated	1631	59.51	4.77	59.66	4.67	48.33	21.18
Bifidobacterium longum DJO10A, complete genome	Host-associated	1990	60.56	4.30	60.89	4.02	45.39	18.37
Bifidobacterium longum NCC2705, complete genome	Host-associated	1727	60.24	4.37	60.39	4.28	44.35	18.20
Bordetella petrii DSM 12804, complete genome	Aquatic	5027	65.59	4.54	65.83	4.38	51.49	21.17
Bradyrhizobium japonicum USDA 110, complete genome	Host-associated	8317	64.12	3.75	64.40	3.53	46.64	19.75
Bradyrhizobium sp. BTAi1, complete genome	Host-associated	7394	65.09	3.41	65.35	3.17	45.52	21.39
Bradyrhizobium sp. ORS278, complete genome	Host-associated	6717	65.78	3.31	66.05	3.02	42.49	18.98
Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete genome	Host-associated	564	27.33	3.70	27.26	3.62	44.55	18.70
Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome	Host-associated	504	26.92	3.44	26.87	3.36	43.92	16.57
Buchnera aphidicola str. Cc (Cinara cedri), complete genome	Host-associated	357	21.40	4.64	21.32	4.51	60.28	28.22
Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome	Host-associated	546	26.26	3.97	26.15	3.86	45.09	17.00
Burkholderia cepacia AMMD chromosome 1, complete sequence	Multiple	3213	66.92	4.28	67.22	4.05	48.55	22.25
Burkholderia cepacia AMMD chromosome 3, complete sequence	Multiple	1013	66.16	4.31	66.46	4.09	53.05	21.70
Burkholderia cepacia AMMD chromosome 2, complete sequence	Multiple	2346	66.96	4.07	67.21	3.89	47.74	20.86
Burkholderia cenocepacia HI2424 chromosome 2, complete sequence		2686	66.92	4.27	67.22	4.01	48.03	21.28
Burkholderia cenocepacia HI2424 chromosome 1, complete sequence		3159	66.90	4.32	67.16	4.13	47.44	20.54
Burkholderia cenocepacia HI2424 chromosome 3, complete sequence		918	67.28	3.76	67.52	3.55	47.62	19.46
Burkholderia phymatum STM815 chromosome 1, complete sequence	Host-associated	3072	63.22	3.39	63.45	3.21	41.95	17.76
Burkholderia phymatum STM815 chromosome 2, complete sequence	Host-associated	2349	62.69	3.82	62.87	3.69	48.21	21.55
Burkholderia phytofirmans PsJN chromosome 2, complete sequence	Terrestrial	3152	62.43	3.63	62.64	3.46	44.55	17.76
Burkholderia phytofirmans PsJN chromosome 1, complete sequence	Terrestrial	3922	62.82	3.61	63.07	3.41	44.58	20.08
Burkholderia thailandensis E264 chromosome I, complete sequence	Terrestrial	3276	67.31	4.35	67.46	4.15	49.99	24.03
Burkholderia thailandensis E264 chromosome II, complete sequence	Terrestrial	2358	67.58	4.44	67.81	4.21	51.28	22.98
Caldicellulosiruptor saccharolyticus DSM 8903, complete genome	Specialized	2679	35.37	3.64	35.39	3.60	47.57	20.06
Campylobacter hominis ATCC BAA-381, complete genome	Host-associated	1682	31.82	5.24	32.88	4.20	66.80	40.31
Candidatus Amoebophilus asiaticus 5a2, complete genome	Host-associated	1283	35.54	3.18	35.89	2.69	43.41	16.23
Candidatus Blochmannia floridanus, complete genome	Specialized	583	28.77	3.26	28.79	3.12	43.09	16.92
Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome		610	31.96	3.14	31.98	2.95	38.84	16.15
Candidatus Carsonella ruddii PV, complete genome	Specialized	182	14.94	4.68	15.24	4.51	73.03	28.24
Candidatus Desulforudis audaxviator MP104C, complete genome	Specialized	2157	61.26	5.15	61.73	4.98	0.00	0.00
Candidatus Pelagibacter ubique HTCC1062, complete genome	Aquatic	1354	29.30	4.13	29.33	4.02	48.21	17.55
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), complete genome		976	34.92	3.10	35.06	3.02	39.32	18.13
Candidatus Sulcia muelleri GWSS, complete genome		227	21.52	4.53	21.71	4.18	58.68	26.96
Candidatus Vesicomyosocius okutanii HA, complete genome	Host-associated	937	32.44	3.07	32.52	2.99	39.81	14.84
Carboxydothermus hydrogenoformans Z-2901, complete genome	Aquatic	2620	41.28	5.58	42.12	4.71	55.10	27.90
Caulobacter crescentus CB15, complete genome	Aquatic	3737	67.28	3.33	67.53	3.08	40.79	15.63
Caulobacter sp. K31, complete genome		5061	67.78	3.85	68.02	3.68	44.42	17.20
Cellvibrio japonicus Ueda107, complete genome	Terrestrial	3754	52.09	5.42	52.58	5.01	44.92	18.38
Chlorobaculum parvum NCIB 8327, complete genome	Aquatic	2043	56.24	5.58	56.67	5.34	41.72	18.03
Chlorobium chlorochromatii CaD3, complete genome	Aquatic	2002	44.16	5.32	44.58	5.18	49.65	21.15
Chlorobium limicola DSM 245, complete genome	Aquatic	2434	51.51	4.82	51.90	4.58	39.27	18.12
Chlorobium phaeobacteroides BS1, complete genome	Aquatic	2469	48.93	4.12	49.41	3.75	37.73	15.43
Chlorobium phaeobacteroides DSM 266, complete genome	Aquatic	2650	48.61	4.51	48.83	4.45	41.22	16.79
Prosthecochloris vibrioformis DSM 265, complete genome	Aquatic	1753	53.25	3.40	53.39	3.32	37.76	15.03
Chlorobium tepidum TLS, complete genome	Specialized	2252	55.49	6.35	57.36	4.62	42.64	18.59
Chloroflexus aurantiacus J-10-fl, complete genome	Specialized	3853	56.76	3.69	56.85	3.63	36.23	15.23
Chloroherpeton thalassium ATCC 35110, complete genome	Aquatic	2710	45.32	4.79	45.56	4.61	52.28	27.36
Chromohalobacter salexigens DSM 3043, complete genome	Aquatic	3298	64.09	4.71	64.29	4.62	44.86	22.43
Clostridium acetobutylicum ATCC 824, complete genome	Multiple	3672	31.08	3.28	31.23	3.07	46.88	18.43
Clostridium beijerinckii NCIMB 8052, complete genome		5020	30.63	3.23	30.68	3.14	47.35	18.28
Clostridium botulinum B str. Eklund 17B, complete genome	Multiple	3473	27.99	3.63	28.14	3.35	50.36	19.86
Clostridium kluyveri DSM 555, complete genome	Aquatic	3838	32.50	5.18	32.58	5.05	61.66	29.46
Clostridium novyi NT, complete genome	Terrestrial	2315	28.96	3.46	29.01	3.36	49.15	19.58
Clostridium phytofermentans ISDg, complete genome	Terrestrial	3902	35.95	3.36	35.99	3.27	42.72	17.21
Clostridium thermocellum ATCC 27405, complete genome	Multiple	3189	39.72	4.22	39.90	4.11	46.08	20.68
Colwellia psychrerythraea 34H, complete genome	Specialized	4910	38.03	3.50	38.61	2.83	43.76	17.72
Coprothermobacter proteolyticus DSM 5265, complete genome	Specialized	1482	44.58	2.77	44.76	2.46	42.79	18.47
Corynebacterium efficiens YS-314, complete genome	Multiple	2950	63.03	4.20	63.53	3.72	48.10	23.91
Corynebacterium glutamicum ATCC 13032, complete genome	Multiple	2993	54.31	3.83	54.52	3.70	46.62	21.25
Corynebacterium glutamicum ATCC 13032, complete genome	Multiple	3057	54.23	3.92	54.49	3.75	46.56	21.16
Corynebacterium glutamicum R, complete genome	Multiple	3052	54.72	3.72	54.93	3.51	45.15	20.85
Cupriavidus taiwanensis, complete genome	Host-associated	2243	67.90	4.11	68.22	3.88	47.44	20.71
Cupriavidus taiwanensis, complete genome	Host-associated	3135	67.52	3.97	67.80	3.72	45.11	17.60
Cyanothece sp. ATCC 51142 chromosome linear, complete sequence	Aquatic	449	38.39	4.71	38.75	4.46	0.00	0.00
Cyanothece sp. ATCC 51142 chromosome circular, complete sequence	Aquatic	4762	37.82	5.20	38.33	4.97	0.00	0.00
Cytophaga hutchinsonii ATCC 33406, complete genome	Multiple	3785	38.69	4.14	39.02	3.87	46.07	20.57
Dechloromonas aromatica RCB, complete genome	Multiple	4171	59.34	4.35	59.50	4.28	42.16	18.35
Dehalococcoides ethenogenes 195, complete genome	Multiple	1580	48.76	4.21	49.46	3.53	46.93	28.82
Dehalococcoides sp. BAV1, complete genome		1371	47.53	3.61	47.81	3.34	39.11	20.06
Dehalococcoides sp. CBDB1, complete genome	Multiple	1458	47.26	3.75	47.67	3.36	38.03	17.54
Deinococcus geothermalis DSM 11300, complete genome	Aquatic	2335	66.82	3.70	66.95	3.56	40.56	14.11
Deinococcus radiodurans R1 chromosome 1, complete sequence	Terrestrial	2629	67.25	4.30	67.42	4.19	41.84	16.98
Deinococcus radiodurans R1 chromosome 2, complete sequence	Terrestrial	368	66.98	5.06	66.99	5.10	44.63	24.13
Delftia acidovorans SPH-1, complete genome	Multiple	6040	66.62	5.21	66.88	4.99	54.41	24.46
Desulfitobacterium hafniense Y51, complete genome	Specialized	5060	47.73	4.89	47.92	4.76	45.26	17.78
Candidatus Desulfococcus oleovorans Hxd3, complete genome	Aquatic	3265	56.47	5.93	56.84	5.74	43.29	18.15
Desulfotalea psychrophila LSv54, complete genome	Specialized	3116	46.83	4.73	47.17	4.52	44.01	18.30
Desulfotomaculum reducens MI-1, complete genome	Aquatic	3276	42.74	4.54	42.85	4.42	43.59	19.01
Desulfovibrio desulfuricans G20, complete genome	Multiple	3775	57.05	5.42	57.92	4.28	50.20	25.91
Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome	Multiple	2941	62.87	4.18	63.07	4.11	42.17	18.43
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome	Multiple	3379	62.04	5.68	63.22	4.18	45.51	19.92
Dictyoglomus thermophilum H-6-12, complete genome	Aquatic	1912	33.57	3.14	33.68	2.88	45.08	18.00
Dinoroseobacter shibae DFL 12, complete genome		3577	66.00	4.10	66.22	3.96	42.14	15.83
Elusimicrobium minutum Pei191, complete genome	Host-associated	1529	40.07	3.57	40.28	3.36	48.93	30.02
Enterobacter sp. 638, complete genome		4115	53.36	4.36	53.65	4.24	41.21	18.32
Erwinia tasmaniensis, complete genome	Host-associated	3427	54.04	5.84	54.52	5.51	42.16	18.26
Erythrobacter litoralis HTCC2594, complete genome	Aquatic	3011	63.05	3.61	63.43	3.21	39.96	16.05
Escherichia coli ATCC 8739, complete genome	Host-associated	4200	51.29	4.70	51.62	4.48	41.62	17.24
Escherichia coli HS, complete genome	Host-associated	4378	50.69	5.39	51.54	4.42	42.72	18.21
Escherichia coli SE11, complete genome	Host-associated	4679	50.67	5.36	51.34	4.79	43.68	18.04
Escherichia coli SMS-3-5, complete genome	Multiple	4743	50.50	5.49	51.30	4.73	43.85	19.10
Escherichia coli str. K-12 substr. DH10B, complete genome	Host-associated	4126	51.13	4.76	51.48	4.51	42.10	17.98
Escherichia coli str. K-12 substr. MG1655, complete genome	Host-associated	4295	51.16	4.75	51.41	4.64	42.58	18.41
Exiguobacterium sibiricum 255-15, complete genome	Specialized	3007	47.91	4.24	48.28	4.02	0.00	0.00
Fervidobacterium nodosum Rt17-B1, complete genome	Specialized	1750	35.13	3.24	35.16	3.20	40.92	14.73
Flavobacterium johnsoniae UW101, complete genome	Multiple	5017	34.45	3.97	34.49	3.89	52.95	21.63
Francisella tularensis subsp. novicida U112, complete genome	Multiple	1719	32.83	3.29	32.92	3.22	43.40	16.19
Frankia alni ACN14a, complete genome	Host-associated	6711	72.11	4.30	72.70	3.67	47.86	20.81
Frankia sp. CcI3, complete genome	Multiple	4499	69.98	3.62	70.18	3.51	46.90	18.78
Frankia sp. EAN1pec, complete genome	Multiple	7191	70.93	4.05	71.16	3.92	47.21	17.46
Geobacillus kaustophilus HTA426, complete genome	Aquatic	3498	52.20	5.97	52.70	5.79	54.11	29.13
Geobacillus thermodenitrificans NG80-2, complete genome	Specialized	3392	49.23	5.50	49.57	5.43	53.01	30.21
Geobacter bemidjiensis Bem, complete genome	Terrestrial	4018	60.32	4.83	60.80	4.56	44.98	19.06
Geobacter lovleyi SZ, complete genome	Multiple	3606	54.66	5.02	55.01	4.89	45.54	18.00
Geobacter metallireducens GS-15, complete genome	Aquatic	3519	59.54	5.81	59.83	5.72	49.34	20.24
Geobacter sulfurreducens PCA, complete genome	Multiple	3446	60.71	5.38	61.23	4.94	45.08	17.84
Geobacter uraniireducens Rf4, complete genome	Multiple	4357	54.31	5.82	54.71	5.69	46.01	19.50
Gloeobacter violaceus PCC 7421, complete genome	Terrestrial	4430	62.08	4.75	62.48	4.53	38.91	13.63
Gluconacetobacter diazotrophicus PAl 5, complete genome	Host-associated	3778	66.22	5.80	66.95	5.03	53.17	21.89
Gluconobacter oxydans 621H, complete genome	Multiple	2432	61.46	3.86	61.61	3.65	40.79	15.66
Gramella forsetii KT0803, complete genome	Multiple	3584	36.46	3.62	36.79	3.13	44.45	19.59
Hahella chejuensis KCTC 2396, complete genome	Aquatic	6778	53.37	5.65	54.15	5.05	42.72	18.39
Halorhodospira halophila SL1, complete genome		2407	67.91	4.09	68.13	3.96	48.23	21.29
Helicobacter pylori G27, complete genome	Host-associated	1493	39.14	3.74	39.49	3.33	43.64	19.67
Heliobacterium modesticaldum Ice1, complete genome	Multiple	3000	56.69	6.24	57.92	5.29	45.84	18.44
Herminiimonas arsenicoxydans, complete genome	Aquatic	3325	54.41	4.55	54.97	4.12	49.65	21.99
Herpetosiphon aurantiacus ATCC 23779, complete genome	Multiple	4976	50.64	4.00	50.73	3.92	44.65	21.57
Hydrogenobaculum sp. Y04AAS1, complete genome	Aquatic	1629	34.89	3.42	34.89	3.27	42.43	17.12
Hyphomonas neptunium ATCC 15444, complete genome	Aquatic	3505	62.10	3.66	62.32	3.50	41.71	15.15
Idiomarina loihiensis L2TR, complete genome	Specialized	2628	47.04	3.23	47.21	3.12	40.41	18.04
Jannaschia sp. CCS1, complete genome	Aquatic	4212	62.35	3.42	62.52	3.30	38.20	15.26
Janthinobacterium sp. Marseille, complete genome	Aquatic	3697	54.72	4.12	54.83	4.06	47.00	21.49
Kineococcus radiotolerans SRS30216, complete genome	Multiple	4480	74.20	3.88	74.39	3.77	55.13	20.95
Klebsiella pneumoniae 342, complete genome	Host-associated	5425	57.01	6.61	58.14	5.47	44.44	18.04
Kocuria rhizophila DC2201, complete genome	Multiple	2357	70.94	3.83	71.12	3.59	45.96	20.07
Lactobacillus acidophilus NCFM, complete genome	Multiple	1862	34.79	3.54	34.91	3.30	47.34	19.37
Lactobacillus brevis ATCC 367, complete genome	Multiple	2185	46.63	3.60	47.01	3.25	40.85	16.56
Lactobacillus casei ATCC 334, complete genome	Multiple	2751	46.68	3.62	47.09	3.18	41.20	17.74
Lactobacillus casei, complete genome	Specialized	3044	46.51	3.59	46.77	3.26	44.12	19.86
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete genome	Multiple	1562	50.73	5.22	51.56	4.75	52.11	21.78
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete genome	Multiple	1721	50.44	5.59	51.28	5.05	53.10	22.62
Lactobacillus fermentum IFO 3956, complete genome	Multiple	1843	52.54	5.45	52.74	5.50	47.57	23.95
Lactobacillus gasseri ATCC 33323, complete genome	Host-associated	1755	35.09	3.27	35.22	3.06	48.98	19.51
Lactobacillus helveticus DPC 4571, complete genome	Multiple	1610	37.40	3.87	37.51	3.81	47.76	20.17
Lactobacillus johnsonii NCC 533, complete genome	Host-associated	1821	34.52	3.16	34.59	3.00	48.78	20.50
Lactobacillus plantarum WCFS1, complete genome	Host-associated	3007	45.07	4.00	45.38	3.78	42.76	18.99
Lactobacillus reuteri F275, complete genome		1900	38.98	3.35	39.16	3.18	44.68	19.46
Lactobacillus reuteri F275, complete genome	Host-associated	1820	39.15	3.24	39.23	3.10	43.69	18.59
Lactobacillus sakei subsp. sakei 23K, complete genome	Multiple	1879	41.46	3.39	41.79	3.15	45.09	20.17
Lactobacillus salivarius UCC118, complete genome	Host-associated	1717	32.80	3.30	33.01	3.09	50.63	22.38
Lactococcus lactis subsp. cremoris MG1363, complete genome	Multiple	2434	35.99	3.62	36.27	3.29	53.24	23.47
Lactococcus lactis subsp. cremoris SK11, complete genome	Multiple	2384	36.12	3.69	36.47	3.29	51.83	22.27
Lactococcus lactis subsp. lactis Il1403, complete genome	Multiple	2321	35.64	3.56	35.80	3.29	53.25	23.33
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome I, complete sequence	Multiple	3277	38.89	4.02	38.89	3.98	43.59	20.87
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome II, complete sequence	Multiple	266	39.21	3.79	39.26	3.84	41.14	13.44
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence	Multiple	3391	38.82	4.08	38.91	3.94	43.94	20.80
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome II, complete sequence	Multiple	276	39.17	3.87	39.26	3.85	42.16	14.79
Leptothrix cholodnii SP-6, complete genome	Aquatic	4363	68.81	4.05	69.00	3.93	0.00	0.00
Leuconostoc citreum KM20, complete genome		1702	39.15	3.06	39.30	2.89	0.00	0.00
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293, complete genome	Multiple	1970	37.86	3.35	38.06	3.06	44.15	19.65
Listeria innocua Clip11262, complete genome	Multiple	2968	37.44	3.31	37.60	3.17	46.14	18.78
Listeria welshimeri serovar 6b str. SLCC5334, complete genome	Multiple	2774	36.29	3.56	36.50	3.23	44.81	20.54
Magnetococcus sp. MC-1, complete genome	Aquatic	3716	54.32	4.16	54.48	4.05	54.70	26.29
Magnetospirillum magneticum AMB-1, complete genome	Aquatic	4559	65.55	4.21	65.86	3.94	45.31	22.53
Mannheimia succiniciproducens MBEL55E, complete genome	Host-associated	2369	42.00	5.13	43.16	3.85	46.55	23.37
Maricaulis maris MCS10, complete genome	Aquatic	3063	62.87	3.31	62.98	3.24	41.19	16.59
Marinobacter aquaeolei VT8, complete genome	Aquatic	3858	57.44	3.61	57.65	3.51	40.87	16.13
Marinomonas sp. MWYL1, complete genome	Aquatic	4439	43.05	3.35	43.11	3.31	42.96	17.28
Mesorhizobium loti MAFF303099, complete genome	Multiple	6743	62.95	3.53	63.26	3.27	42.28	16.31
Mesorhizobium sp. BNC1, complete genome	Multiple	4064	61.13	3.22	61.26	3.08	43.90	18.47
Methylacidiphilum infernorum V4, complete genome	Specialized	2472	44.35	5.40	45.69	4.04	44.83	21.84
Methylibium petroleiphilum PM1, complete genome	Aquatic	3819	69.05	3.88	69.20	3.77	47.76	18.76
Methylobacillus flagellatus KT, complete genome	Specialized	2753	55.83	4.40	56.09	4.24	42.87	18.77
Methylobacterium extorquens PA1, complete genome	Multiple	4829	68.64	4.16	68.91	3.99	46.30	22.12
Methylobacterium populi BJ001, complete genome		5314	69.70	4.03	69.93	3.88	46.72	19.56
Methylobacterium radiotolerans JCM 2831, complete genome	Host-associated	5686	71.63	4.10	71.79	3.99	0.00	0.00
Methylobacterium sp. 4-46, complete genome	Multiple	6609	71.87	5.26	72.07	5.13	0.00	0.00
Methylococcus capsulatus str. Bath, complete genome	Multiple	2956	63.47	3.81	63.75	3.51	40.53	16.05
Moorella thermoacetica ATCC 39073, complete genome	Aquatic	2465	56.01	6.30	56.47	6.10	42.63	16.07
Mycobacterium gilvum PYR-GCK, complete genome		5241	68.01	3.16	68.14	3.05	42.17	18.06
Mycobacterium sp. JLS, complete genome	Multiple	5739	68.46	3.26	68.58	3.17	42.50	18.40
Mycobacterium sp. KMS, complete genome	Multiple	5460	68.56	3.23	68.70	3.12	41.61	17.26
Mycobacterium sp. MCS, complete genome		5391	68.58	3.21	68.70	3.11	41.17	16.81
Mycobacterium vanbaalenii PYR-1, complete genome		5979	67.94	3.09	68.06	2.99	39.97	16.00
Myxococcus xanthus DK 1622, complete genome	Terrestrial	7331	68.63	3.29	68.83	3.08	45.84	18.13
Natranaerobius thermophilus JW/NM-WN-LF, complete genome	Specialized	2882	36.34	3.75	36.54	3.56	40.54	16.27
Nitratiruptor sp. SB155-2, complete genome	Specialized	1843	39.50	3.88	39.62	3.79	43.55	18.34
Nitrobacter hamburgensis X14, complete genome	Terrestrial	3804	62.04	4.09	62.38	3.89	46.27	18.51
Nitrobacter winogradskyi Nb-255, complete genome	Terrestrial	3122	62.44	3.62	62.72	3.39	43.25	17.44
Nitrosococcus oceani ATCC 19707, complete genome	Aquatic	2974	50.53	4.64	50.73	4.55	47.77	24.01
Nitrosomonas europaea ATCC 19718, complete genome	Multiple	2461	50.82	4.40	51.08	4.15	43.77	19.03
Nitrosomonas eutropha C91, complete genome	Multiple	2444	48.91	4.81	49.06	4.66	43.79	18.54
Nitrosospira multiformis ATCC 25196 chromosome 1, complete sequence	Terrestrial	2757	54.24	3.57	54.45	3.39	37.70	13.85
Nocardioides sp. JS614, complete genome	Terrestrial	4645	71.76	3.53	71.89	3.47	46.16	17.25
Nostoc punctiforme PCC 73102, complete genome	Multiple	6087	42.28	4.13	42.41	4.10	39.95	15.35
Nostoc sp. PCC 7120, complete genome	Multiple	5366	42.00	4.11	42.18	3.96	40.75	16.05
Novosphingobium aromaticivorans DSM 12444, complete genome	Multiple	3324	65.30	3.21	65.45	3.06	40.87	17.76
Oceanobacillus iheyensis HTE831, complete genome	Multiple	3500	35.61	3.24	35.77	3.05	43.79	18.97
Oenococcus oeni PSU-1, complete genome	Multiple	1691	37.95	4.38	38.51	3.74	45.63	21.23
Oligotropha carboxidovorans OM5, complete genome	Multiple	3722	62.38	3.90	63.01	3.20	44.69	18.11
Opitutus terrae PB90-1, complete genome	Aquatic	4612	65.02	3.28	65.19	3.14	0.00	0.00
Paracoccus denitrificans PD1222 chromosome 1, complete sequence	Multiple	2799	66.57	4.21	66.87	4.06	45.89	20.15
Paracoccus denitrificans PD1222 chromosome 2, complete sequence	Multiple	1662	66.77	4.14	67.02	3.97	43.52	17.09
Parvibaculum lavamentivorans DS-1, complete genome	Multiple	3636	62.59	3.59	62.70	3.50	47.25	21.45
Pediococcus pentosaceus ATCC 25745, complete genome	Multiple	1755	37.46	3.43	37.65	3.18	48.31	23.11
Pelobacter carbinolicus DSM 2380, complete genome	Aquatic	3352	55.00	5.35	55.70	4.93	42.38	16.96
Pelobacter propionicus DSM 2379, complete genome	Multiple	3576	58.84	6.26	59.38	5.96	47.34	17.08
Pelodictyon luteolum DSM 273, complete genome	Multiple	2083	57.61	3.94	57.86	3.78	40.34	17.11
Pelodictyon phaeoclathratiforme BU-1, complete genome	Multiple	2707	47.93	4.84	48.49	4.59	39.91	15.67
Pelotomaculum thermopropionicum SI, complete genome	Specialized	2920	53.79	6.39	54.31	6.11	45.71	18.37
Petrotoga mobilis SJ95, complete genome	Specialized	1898	33.98	3.25	34.02	3.19	40.17	15.18
Photobacterium profundum SS9 chromosome 2, complete sequence	Multiple	2006	41.70	3.63	41.84	3.52	44.99	16.89
Photobacterium profundum SS9 chromosome 1, complete sequence	Multiple	3416	42.37	3.35	42.47	3.23	44.24	18.32
Polaromonas naphthalenivorans CJ2, complete genome	Aquatic	4084	62.80	5.38	63.08	5.23	46.97	18.52
Polaromonas sp. JS666, complete genome	Multiple	4817	62.60	4.16	62.83	3.96	48.26	19.82
Polynucleobacter necessarius STIR1, complete genome	Host-associated	1508	45.58	2.84	45.89	2.42	0.00	0.00
Polynucleobacter sp. QLW-P1DMWA-1, complete genome	Aquatic	2077	45.00	2.74	45.06	2.69	42.47	19.06
Prochlorococcus marinus str. AS9601, complete genome	Aquatic	1921	31.48	4.43	31.81	4.11	48.12	20.17
Prochlorococcus marinus str. MIT 9211, complete genome	Aquatic	1855	38.50	3.88	38.46	3.69	48.44	22.29
Prochlorococcus marinus str. MIT 9215, complete genome	Aquatic	1983	31.47	4.41	31.76	4.09	47.44	19.25
Prochlorococcus marinus str. MIT 9301, complete genome	Aquatic	1907	31.59	4.38	31.93	4.05	46.76	18.59
Prochlorococcus marinus str. MIT 9303, complete genome	Aquatic	2997	50.51	5.74	51.48	5.58	50.84	20.02
Prochlorococcus marinus str. MIT 9312, complete genome	Aquatic	1810	31.73	4.34	31.73	4.20	44.96	17.28
Prochlorococcus marinus str. MIT 9313, complete genome	Aquatic	2269	51.75	4.82	52.00	4.78	42.93	15.69
Prochlorococcus marinus str. MIT 9515, complete genome	Aquatic	1906	31.24	4.51	31.52	4.15	47.49	19.29
Prochlorococcus marinus str. NATL1A, complete genome	Aquatic	2193	35.54	4.51	35.68	4.21	49.76	21.44
Prochlorococcus marinus str. NATL2A, complete genome	Aquatic	2163	35.61	4.50	35.82	4.18	49.39	20.39
Prochlorococcus marinus subsp. marinus str. CCMP1375, complete genome	Aquatic	1883	37.01	3.99	37.02	3.70	46.85	18.30
Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete genome	Aquatic	1717	31.44	4.23	31.42	4.02	45.65	17.84
Prosthecochloris aestuarii DSM 271, complete genome	Aquatic	2263	50.15	4.10	50.49	3.88	38.80	18.05
Pseudoalteromonas haloplanktis TAC125 chromosome II, complete sequence	Aquatic	546	39.89	3.43	40.21	3.06	46.05	20.23
Pseudoalteromonas haloplanktis TAC125 chromosome I, complete genome	Aquatic	2939	40.39	3.39	40.78	2.96	48.43	21.74
Pseudomonas fluorescens Pf-5, complete genome	Multiple	6138	63.52	4.07	63.77	3.90	45.57	18.75
Pseudomonas fluorescens Pf0-1, complete genome	Multiple	5736	60.63	4.15	60.92	3.91	42.08	19.08
Pseudomonas putida F1, complete genome	Multiple	5252	61.99	3.83	62.23	3.68	46.64	20.23
Pseudomonas putida GB-1, complete genome	Multiple	5409	62.19	4.01	62.44	3.87	47.13	20.94
Pseudomonas putida KT2440, complete genome	Multiple	5350	61.83	4.04	62.13	3.82	47.22	20.01
Pseudomonas putida W619, complete genome	Multiple	5182	61.60	4.02	61.85	3.90	0.00	0.00
Pseudomonas stutzeri A1501, complete genome	Host-associated	4128	63.79	4.21	64.14	3.89	45.76	18.52
Psychrobacter arcticus 273-4, complete genome	Specialized	2120	44.09	3.30	44.24	3.20	43.39	19.52
Psychrobacter cryohalolentis K5, complete genome	Multiple	2467	43.76	3.25	43.87	3.19	42.75	19.30
Psychrobacter sp. PRwf-1, complete genome	Aquatic	2370	45.93	3.38	46.14	3.23	42.91	21.10
Psychromonas ingrahamii 37, complete genome	Aquatic	3545	40.65	3.86	40.86	3.75	44.58	18.94
Ralstonia eutropha H16 chromosome 1, complete sequence	Specialized	3651	66.66	4.02	66.87	3.87	46.30	18.69
Ralstonia eutropha H16 chromosome 2, complete sequence	Specialized	2555	66.96	3.95	67.14	3.81	48.51	19.26
Ralstonia eutropha JMP134 chromosome 2, complete sequence	Multiple	2407	65.27	3.11	65.46	2.93	41.76	15.32
Ralstonia eutropha JMP134 chromosome 1, complete sequence	Multiple	3439	64.83	3.27	64.98	3.13	42.15	16.54
Ralstonia metallidurans CH34 chromosome 1, complete sequence	Specialized	3601	63.96	3.54	64.12	3.40	44.65	18.56
Ralstonia metallidurans CH34 chromosome 2, complete sequence	Specialized	2313	63.77	3.52	64.00	3.35	44.10	18.02
Ralstonia pickettii 12J chromosome 1, complete sequence	Multiple	3709	63.57	3.68	63.82	3.46	46.06	18.53
Ralstonia pickettii 12J chromosome 2, complete sequence	Multiple	1153	64.67	3.41	64.92	3.11	42.68	16.78
Rhizobium etli CFN 42, complete genome	Host-associated	4035	61.61	3.19	61.76	3.07	40.20	16.24
Rhizobium etli CIAT 652, complete genome	Host-associated	4343	61.82	3.47	62.16	3.13	41.19	17.14
Rhizobium leguminosarum bv. trifolii WSM2304, complete genome	Host-associated	4325	61.87	3.32	62.13	3.13	41.27	19.12
Rhizobium leguminosarum bv. viciae 3841, complete genome	Host-associated	4694	61.51	3.25	61.72	3.07	41.83	17.05
Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence	Multiple	835	68.89	4.45	69.07	4.27	46.09	21.69
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence	Multiple	3022	68.78	4.15	68.95	4.06	43.75	20.55
Rhodobacter sphaeroides ATCC 17025, complete genome	Multiple	3111	68.34	3.47	68.54	3.32	41.72	16.36
Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence	Multiple	2973	68.89	3.66	69.10	3.45	41.88	17.61
Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence	Multiple	1052	68.83	4.33	68.97	4.23	47.55	20.38
Rhodococcus sp. RHA1, complete genome	Terrestrial	7211	67.46	3.09	67.67	2.89	42.01	17.36
Rhodoferax ferrireducens T118, complete genome	Multiple	4170	60.13	4.20	60.30	4.11	44.20	18.14
Rhodopirellula baltica SH 1, complete genome	Aquatic	7325	54.91	2.96	55.41	2.32	42.49	18.95
Rhodopseudomonas palustris BisA53, complete genome	Multiple	4878	64.57	3.96	64.89	3.77	44.27	16.89
Rhodopseudomonas palustris BisB18, complete genome	Multiple	4886	65.03	3.87	65.31	3.67	43.06	16.52
Rhodopseudomonas palustris BisB5, complete genome	Multiple	4397	64.98	3.46	65.25	3.30	42.75	17.97
Rhodopseudomonas palustris CGA009, complete genome	Multiple	4813	65.23	3.17	65.44	2.99	40.29	16.07
Rhodopseudomonas palustris HaA2, complete genome	Multiple	4683	66.14	3.54	66.37	3.39	42.68	18.39
Rhodopseudomonas palustris TIE-1, complete genome		5246	65.08	3.42	65.33	3.20	43.09	18.12
Rhodospirillum centenum SW, complete genome	Aquatic	4002	70.48	3.92	70.69	3.67	44.76	17.58
Rhodospirillum rubrum ATCC 11170, complete genome	Multiple	3791	65.73	4.27	65.95	4.08	42.10	17.35
Rickettsia bellii OSU 85-389, complete genome		1476	31.14	4.18	31.47	3.86	47.22	17.72
Rickettsia bellii RML369-C, complete genome	Host-associated	1429	31.34	3.91	31.43	3.82	45.61	17.89
Rickettsia massiliae MTU5, complete genome	Host-associated	968	32.29	3.64	32.44	3.58	44.91	20.59
Roseiflexus castenholzii DSM 13941, complete genome	Aquatic	4330	60.37	3.89	60.53	3.76	39.14	18.06
Roseiflexus sp. RS-1, complete genome	Specialized	4517	60.36	4.18	60.56	4.04	40.79	19.15
Roseobacter denitrificans OCh 114, complete genome	Multiple	3946	58.98	3.48	59.34	3.05	38.75	15.58
Rubrobacter xylanophilus DSM 9941, complete genome	Specialized	3140	70.78	4.99	70.95	4.86	50.99	20.02
Saccharophagus degradans 2-40, complete genome	Aquatic	4008	46.18	3.60	46.26	3.55	52.51	24.61
Saccharopolyspora erythraea NRRL 2338, complete genome	Terrestrial	7197	71.31	3.11	71.55	2.89	44.85	16.60
Salinibacter ruber DSM 13855, complete genome	Specialized	2801	66.46	4.24	66.77	3.95	43.17	16.38
Salinispora arenicola CNS-205, complete genome	Aquatic	4917	69.55	3.52	69.69	3.42	45.17	19.72
Salinispora tropica CNB-440, complete genome	Aquatic	4536	69.44	3.32	69.60	3.24	43.01	16.86
Shewanella amazonensis SB2B, complete genome	Multiple	3645	53.89	3.86	54.07	3.77	40.32	18.55
Shewanella baltica OS155, complete genome	Aquatic	4307	46.84	3.64	47.01	3.57	40.60	15.82
Shewanella baltica OS185, complete genome	Aquatic	4323	46.95	3.86	47.11	3.78	41.43	17.19
Shewanella baltica OS195, complete genome	Aquatic	4499	46.87	3.90	47.04	3.81	42.21	17.39
Shewanella denitrificans OS217, complete genome	Aquatic	3754	45.58	3.82	45.71	3.76	41.19	17.82
Shewanella frigidimarina NCIMB 400, complete genome	Multiple	4029	42.09	3.12	42.21	3.00	41.99	17.97
Shewanella halifaxensis HAW-EB4, complete genome		4278	45.20	3.38	45.36	3.29	42.63	16.48
Shewanella loihica PV-4, complete genome	Multiple	3859	54.50	4.91	54.80	4.74	47.07	18.99
Shewanella pealeana ATCC 700345, complete genome		4241	45.18	3.28	45.35	3.19	42.38	15.87
Shewanella sediminis HAW-EB3, complete genome	Aquatic	4497	46.69	3.68	46.92	3.53	41.93	16.79
Shewanella sp. ANA-3 chromosome 1, complete sequence	Multiple	4111	48.59	4.01	48.79	3.86	42.82	19.08
Shewanella sp. MR-4, complete genome	Multiple	3924	48.43	3.72	48.64	3.62	41.37	17.33
Shewanella sp. MR-7, complete genome	Aquatic	4006	48.37	3.75	48.57	3.65	42.53	18.53
Shewanella woodyi ATCC 51908, complete genome	Multiple	4880	43.99	3.39	44.16	3.29	0.00	0.00
Silicibacter pomeroyi DSS-3, complete genome	Aquatic	3810	64.59	3.55	64.74	3.43	40.88	18.57
Silicibacter sp. TM1040, complete genome	Multiple	3030	60.41	3.16	60.59	3.03	38.50	15.78
Sinorhizobium medicae WSM419, complete genome	Multiple	3529	61.69	2.82	61.93	2.58	39.11	16.62
Sinorhizobium meliloti 1021, complete genome	Multiple	3360	63.01	2.98	63.26	2.77	39.67	16.54
Sodalis glossinidius str. 'morsitans', complete genome	Host-associated	2432	55.45	5.35	55.65	5.32	41.63	17.61
Solibacter usitatus Ellin6076, complete genome	Terrestrial	7826	61.86	3.38	62.04	3.24	40.14	14.57
Sorangium cellulosum 'So ce 56', complete genome	Terrestrial	9384	71.02	4.11	71.16	4.01	49.57	20.12
Sphingomonas wittichii RW1, complete genome	Aquatic	4850	68.70	3.86	68.87	3.72	45.74	17.85
Sphingopyxis alaskensis RB2256, complete genome	Aquatic	3165	65.57	3.76	65.74	3.60	44.53	18.06
Stenotrophomonas maltophilia R551-3, complete genome	Multiple	4039	66.50	3.05	66.64	2.93	46.83	20.05
Streptococcus thermophilus CNRZ1066, complete genome	Multiple	1915	39.34	3.89	39.65	3.68	47.97	22.97
Streptococcus thermophilus LMD-9, complete genome	Multiple	1710	39.31	4.08	39.83	3.67	47.98	23.29
Streptococcus thermophilus LMG 18311, complete genome	Multiple	1889	39.42	3.75	39.70	3.57	47.38	22.56
Streptomyces avermitilis MA-4680, complete genome	Multiple	7580	70.70	3.30	70.88	3.15	46.72	18.36
Streptomyces coelicolor A3(2), complete genome	Multiple	7769	72.07	3.61	72.27	3.42	46.51	16.74
Streptomyces griseus subsp. griseus NBRC 13350, complete genome	Multiple	7136	71.98	3.60	72.16	3.46	0.00	0.00
Sulfurihydrogenibium sp. YO3AOP1, complete genome	Specialized	1721	31.73	3.45	31.80	3.33	43.54	17.83
Sulfurimonas denitrificans DSM 1251, complete genome		2096	34.46	3.28	34.56	3.23	44.36	21.13
Sulfurovum sp. NBC37-1, complete genome	Specialized	2438	44.05	5.28	44.29	5.25	46.41	19.09
Symbiobacterium thermophilum IAM 14863, complete genome	Terrestrial	3338	68.88	4.16	69.17	4.01	44.58	16.70
Synechococcus elongatus PCC 6301, complete genome	Aquatic	2527	55.98	4.05	56.09	4.02	37.81	16.50
Synechococcus elongatus PCC 7942, complete genome	Aquatic	2612	55.84	4.21	56.01	4.17	38.55	17.06
Synechococcus sp. CC9311, complete genome	Aquatic	2892	52.51	5.59	53.41	5.35	45.43	17.42
Synechococcus sp. CC9605, complete genome	Aquatic	2645	59.39	6.29	59.95	6.13	50.34	19.06
Synechococcus sp. CC9902, complete genome	Aquatic	2307	54.52	5.62	54.85	5.58	42.88	17.16
Synechococcus sp. JA-2-3B'a(2-13), complete genome	Specialized	2862	58.48	4.07	58.96	3.81	39.68	14.94
Synechococcus sp. JA-3-3Ab, complete genome	Specialized	2760	60.19	4.44	60.71	4.16	42.46	16.20
Synechococcus sp. PCC 7002, complete genome	Aquatic	2823	50.10	4.34	50.50	4.04	0.00	0.00
Synechococcus sp. RCC307, complete genome	Aquatic	2535	60.61	4.66	61.19	4.52	48.29	19.28
Synechococcus sp. WH 7803, complete genome	Aquatic	2533	60.32	4.87	60.61	4.86	45.60	17.06
Synechococcus sp. WH 8102, complete genome	Aquatic	2519	60.02	6.10	60.30	6.23	51.99	19.07
Synechocystis sp. PCC 6803, complete genome	Aquatic	3172	48.22	4.98	48.35	4.93	39.50	19.51
Syntrophobacter fumaroxidans MPOB, complete genome	Aquatic	4064	59.71	3.83	59.88	3.69	38.51	15.76
Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete genome	Multiple	2504	45.10	4.54	45.34	4.46	43.96	17.92
Syntrophus aciditrophicus SB, complete genome	Multiple	3168	50.97	5.94	51.97	5.39	45.22	19.74
Thermoanaerobacter pseudethanolicus ATCC 33223, complete genome	Aquatic	2243	34.32	4.01	34.44	3.89	46.82	17.97
Thermoanaerobacter sp. X514, complete genome		2349	34.39	3.95	34.49	3.83	47.03	17.43
Thermoanaerobacter tengcongensis MB4, complete genome	Specialized	2588	37.40	4.04	37.64	3.78	46.26	19.64
Thermodesulfovibrio yellowstonii DSM 11347, complete genome	Specialized	2033	33.86	3.63	33.89	3.47	42.49	20.23
Thermosipho melanesiensis BI429, complete genome		1879	31.05	3.59	31.09	3.41	46.41	17.53
Thermosynechococcus elongatus BP-1, complete genome	Specialized	2476	54.12	3.23	54.34	3.12	35.28	14.60
Thermotoga lettingae TMO, complete genome	Specialized	2040	38.58	2.46	38.61	2.39	36.50	13.68
Thermotoga maritima MSB8, complete genome	Specialized	1858	46.09	3.37	46.27	3.10	42.21	19.19
Thermotoga petrophila RKU-1, complete genome	Aquatic	1785	46.02	3.27	46.15	3.13	42.16	18.77
Thermotoga sp. RQ2, complete genome	Specialized	1819	46.10	3.27	46.19	3.19	0.00	0.00
Thermus thermophilus HB27, complete genome	Specialized	1982	69.36	3.27	69.57	3.12	53.77	25.15
Thermus thermophilus HB8, complete genome	Specialized	1973	69.33	3.26	69.61	3.03	54.63	26.44
Thiobacillus denitrificans ATCC 25259, complete genome	Multiple	2827	65.88	4.18	66.15	3.99	47.79	22.17
Thiomicrospira crunogena XCL-2, complete genome	Aquatic	2196	43.52	3.38	43.72	3.24	44.21	22.01
Trichodesmium erythraeum IMS101, complete genome	Aquatic	4451	36.03	4.32	36.21	4.13	46.58	18.86
Verminephrobacter eiseniae EF01-2, complete genome	Host-associated	4908	65.13	4.82	65.34	4.70	55.60	22.39
Vibrio fischeri ES114 chromosome I, complete sequence	Multiple	2586	39.21	3.17	39.31	2.98	44.50	19.81
Vibrio fischeri ES114 chromosome II, complete sequence	Multiple	1175	37.27	3.84	37.52	3.65	42.88	17.00
Vibrio fischeri MJ11 chromosome II, complete sequence	Multiple	1254	37.27	3.71	37.60	3.40	41.97	15.98
Vibrio fischeri MJ11 chromosome I, complete sequence	Multiple	2590	39.17	3.20	39.30	2.97	44.39	18.71
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis, complete genome	Host-associated	611	23.50	4.18	23.42	4.09	46.81	19.03
Wolbachia endosymbiont of Drosophila melanogaster, complete genome	Host-associated	1195	35.43	3.58	35.09	2.70	43.70	17.21
Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome	Host-associated	805	34.55	2.88	34.84	2.63	37.04	16.62
Wolbachia pipientis, complete genome	Host-associated	1275	34.35	2.87	34.48	2.65	41.12	16.22
Wolinella succinogenes DSM 1740, complete genome	Host-associated	2042	48.63	3.50	48.78	3.39	43.11	18.40
Xanthobacter autotrophicus Py2, complete genome	Multiple	4746	67.51	3.97	67.71	3.86	46.82	20.33
Xanthomonas campestris pv. campestris, complete genome		4467	64.83	4.61	65.18	4.35	52.69	24.92
Xylella fastidiosa M23, complete genome	Host-associated	2161	52.03	5.42	52.53	4.95	0.00	0.00
Zymomonas mobilis subsp. mobilis ZM4, complete genome	Multiple	1998	46.43	5.31	47.64	3.89	45.25	19.83