version 1.0
Pelodictyon luteolum DSM 273, complete genome - 1..2364842 2083 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 50.13 -1 284..1420 + 378 78185893 - Plut_0001 - DNA-directed DNA polymerase 2 51.26 -1 1555..2664 + 369 78185894 - Plut_0002 - RecF protein 3 53.40 -1 2667..2960 + 97 78185895 - Plut_0003 - hypothetical protein 4 48.94 -2 3098..4321 - 407 78185896 - Plut_0004 - rubredoxin:oxygen oxidoreductase, putative 5 49.81 -1 4402..6780 - 792 78185897 - Plut_0005 - DNA-directed DNA polymerase B 6 54.83 0 6887..8770 - 627 78185898 - Plut_0006 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 55.37 0 8986..10773 + 595 78185899 secD Plut_0007 - preprotein translocase subunit SecD 8 54.27 0 10796..11731 + 311 78185900 secF Plut_0008 - preprotein translocase subunit SecF 9 55.30 0 11785..13104 + 439 78185901 - Plut_0009 - peptidyl-prolyl cis-trans isomerase SurA 10 55.97 0 13263..15197 - 644 78185902 - Plut_0010 - DNA gyrase, B subunit 11 61.56 +1 15317..15943 - 208 78185903 - Plut_0011 - ribonuclease H 12 58.20 0 16195..17907 + 570 78185904 - Plut_0012 - ribonuclease E and G 13 62.04 +1 17924..18787 + 287 78185905 dapD Plut_0013 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 14 61.18 0 18792..20486 + 564 78185906 - Plut_0014 - peptidase S41A, C-terminal protease 15 58.19 0 20476..21171 - 231 78185907 - Plut_0015 - hypothetical protein 16 57.92 0 21172..22314 - 380 78185908 - Plut_0016 - geranylgeranyl reductase 17 58.64 0 22335..23804 - 489 78185909 - Plut_0017 - glycyl-tRNA synthetase 18 55.45 0 23865..24194 - 109 78185910 - Plut_0018 - hypothetical protein 19 60.46 0 24249..25199 - 316 78185911 - Plut_0019 - muramoyltetrapeptide carboxypeptidase 20 50.56 -1 25266..25532 - 88 78185912 - Plut_0020 - ATP synthase F1, epsilon subunit 21 58.25 0 25546..26994 - 482 78185913 - Plut_0021 - F0F1 ATP synthase subunit beta 22 56.25 0 27264..27791 + 175 78185914 - Plut_0022 - thiol:disulfide interchange protein, thioredoxin family protein 23 60.02 0 27941..29806 + 621 78185915 - Plut_0023 - phosphoenolpyruvate carboxykinase 24 54.33 0 29961..31346 + 461 78185916 - Plut_0024 - toluene transport protein, putative 25 55.91 0 31450..31728 - 92 78185917 - Plut_0025 - hypothetical protein 26 60.56 0 31996..33567 + 523 78185918 - Plut_0026 - Fe-S-cluster-containing hydrogenase components 1-like 27 59.87 0 33587..36454 + 955 78185919 - Plut_0027 - molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit 28 56.64 0 37506..37934 + 142 78185920 - Plut_0030 - hypothetical protein 29 54.90 0 38093..38602 + 169 78185921 - Plut_0031 - hypothetical protein 30 61.18 0 38626..39099 + 157 78185922 - Plut_0032 - rhodanese-like protein 31 56.96 0 39148..39384 + 78 78185923 - Plut_0033 - hypothetical protein 32 57.90 0 39388..40824 + 478 78185924 - Plut_0034 - cobyrinic acid a,c-diamide synthase CbiA 33 55.06 0 41104..41439 + 111 78185925 - Plut_0035 - sulfite reductase, dissimilatory-type, gamma subunit 34 58.85 0 41498..42751 + 417 78185926 - Plut_0036 - sulfite reductase, dissimilatory-type alpha subunit 35 61.30 0 42893..43972 + 359 78185927 - Plut_0037 - sulfite reductase, dissimilatory-type beta subunit 36 61.89 +1 43990..45726 + 578 78185928 - Plut_0038 - putative glutamate synthase (NADPH) small subunit 37 61.26 0 45713..46156 + 147 78185929 - Plut_0039 - hypothetical protein 38 59.17 0 46203..46562 + 119 78185930 - Plut_0040 - DsrE protein 39 55.01 0 46569..46937 + 122 78185931 - Plut_0041 - DsrF protein 40 60.54 0 46995..47288 + 97 78185932 - Plut_0042 - DsrH protein 41 63.29 +1 47315..47758 + 147 78185933 - Plut_0043 - hypothetical protein 42 56.63 0 47755..48750 + 331 78185934 - Plut_0044 - DsrM protein 43 60.00 0 48753..50402 + 549 78185935 - Plut_0045 - DsrK protein 44 57.22 0 50392..50772 + 126 78185936 - Plut_0046 - hypothetical protein 45 63.11 +1 50796..51527 + 243 78185937 - Plut_0047 - polysulfide reductase, subunit B, putative 46 63.10 +1 51561..52736 + 391 78185938 - Plut_0048 - polysulfide reductase, subunit C, putative 47 58.55 0 52733..53200 + 155 78185939 - Plut_0049 - porphyrin biosynthesis protein, putative 48 60.04 0 53176..54579 + 467 78185940 - Plut_0050 - uroporphyrin-III C-methyltransferase-like 49 62.50 +1 54569..54832 + 87 78185941 - Plut_0051 - hypothetical protein 50 58.93 0 55086..55667 + 193 78185942 - Plut_0052 - uridine kinase-like 51 57.95 0 55654..56949 + 431 78185943 - Plut_0053 - transporter, putative 52 60.62 0 56993..58612 - 539 78185944 - Plut_0054 - EmrB/QacA family drug resistance transporter 53 58.06 0 58625..59623 - 332 78185945 - Plut_0055 - multidrug resistance protein A 54 57.59 0 59631..60104 - 157 78185946 - Plut_0056 - universal stress protein 55 60.37 0 60101..61513 - 470 78185947 - Plut_0057 - outer membrane protein, putative 56 60.76 0 61643..63742 + 699 78185948 - Plut_0058 - Fis family transcriptional regulator 57 60.10 0 63849..64655 + 268 78185949 - Plut_0059 - hypothetical protein 58 58.08 0 64659..65543 - 294 78185950 - Plut_0060 - hypothetical protein 59 55.74 0 65604..66152 + 182 78185951 - Plut_0061 - hypothetical protein 60 58.22 0 66171..66608 - 145 78185952 - Plut_0062 - protein tyrosine phosphatase 61 52.14 -1 66945..67412 + 155 78185953 - Plut_0063 - hypothetical protein 62 58.79 0 67435..68628 - 397 78185954 - Plut_0064 - aminotransferase, class I 63 58.74 0 68647..69075 - 142 78185955 - Plut_0065 - hypothetical protein 64 59.28 0 69092..70390 - 432 78185956 - Plut_0066 - phenylacetate--CoA ligase 65 64.56 +1 70387..71004 - 205 78185957 - Plut_0067 - indolepyruvate oxidoreductase subunit B 66 62.66 +1 71001..72599 - 532 78185958 - Plut_0068 - ferredoxin oxidoreductase, alpha subunit 67 57.46 0 72881..74107 + 408 78185959 - Plut_0069 - sulfide dehydrogenase, flavoprotein subunit, putative 68 58.89 0 74132..75352 - 406 78185960 - Plut_0070 - anion-transporting ATPase 69 58.97 0 75653..77107 + 484 78185961 - Plut_0071 - sulfide-quinone reductase, putative 70 52.83 -1 77167..77325 + 52 78185962 - Plut_0072 - hypothetical protein 71 57.73 0 77673..78209 - 178 78185963 - Plut_0073 - nitroreductase family protein 72 53.10 -1 78206..78817 - 203 78185964 - Plut_0074 - hypothetical protein 73 61.65 +1 78868..79944 - 358 78185965 prfA Plut_0075 - peptide chain release factor 1 74 57.00 0 79962..81326 - 454 78185966 - Plut_0076 - peptidase M50, putative membrane-associated zinc metallopeptidase 75 60.05 0 81413..82561 - 382 78185967 - Plut_0077 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 76 59.31 0 82869..84989 - 706 78185968 - Plut_0078 - peptidase M41, FtsH 77 59.03 0 85228..86052 + 274 78185969 - Plut_0079 - orotidine 5'-phosphate decarboxylase subfamily protein 78 58.43 0 86117..87961 + 614 78185970 - Plut_0080 - glucosamine-fructose-6-phosphate aminotransferase, isomerising 79 58.93 0 88013..88387 + 124 78185971 - Plut_0081 - hypothetical protein 80 56.04 0 88529..90043 + 504 78185972 - Plut_0082 - hypothetical protein 81 53.65 -1 90046..90429 + 127 78185973 - Plut_0083 - hypothetical protein 82 59.77 0 90451..91059 + 202 78185974 - Plut_0084 - hypothetical protein 83 64.07 +1 91053..91322 + 89 78185975 - Plut_0085 - hypothetical protein 84 60.17 0 91341..92648 + 435 78185976 - Plut_0086 - periplasmic protein 85 58.70 0 92766..93707 + 313 78185977 - Plut_0087 - hypothetical protein 86 52.33 -1 93825..94124 - 99 78185978 - Plut_0088 - RNA recognition motif-containing protein 87 58.56 0 94422..95753 + 443 78185979 - Plut_0089 - ammonium transporter 88 57.89 0 95770..96111 + 113 78185980 - Plut_0090 - nitrogen regulatory protein P-II (GlnB, GlnK) 89 62.06 +1 96193..97104 + 303 78185981 - Plut_0091 - peptidase C1A, papain 90 59.54 0 97111..97671 - 186 78185982 - Plut_0092 - TPR repeat-containing protein 91 55.08 0 97897..98664 + 255 78185983 - Plut_0093 - putative segregation and condensation protein A 92 61.25 0 98657..99931 + 424 78185984 - Plut_0094 - hypothetical protein 93 60.09 0 99939..100379 + 146 78185985 - Plut_0095 - hypothetical protein 94 63.69 +1 100376..101080 + 234 78185986 - Plut_0096 - protease, putative 95 54.55 0 101145..101540 + 131 78185987 - Plut_0097 - Iojap-related protein 96 58.17 0 101707..104154 + 815 78185988 - Plut_0098 - DNA gyrase, subunit A 97 58.55 0 104208..104441 + 77 78185989 - Plut_0099 - Zn-finger, CDGSH type 98 56.41 0 104478..106271 + 597 78185990 - Plut_0100 - CTP synthetase 99 57.23 0 106313..107329 + 338 78185991 - Plut_0101 - putative AefA 100 54.41 0 112974..114662 - 562 78185992 - Plut_0102 - hypothetical protein 57.61 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.