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Bordetella parapertussis 12822, complete genome - 1..4773551 4185 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 62.50 -1 1..1920 + 639 33594724 gidA BPP0001 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2 66.52 0 1917..2609 + 230 33594725 gidB BPP0002 - glucose inhibited division protein B 3 62.16 -1 2606..3403 + 265 33594726 parA BPP0003 - ParA family protein 4 68.03 0 3410..4216 + 268 33594727 - BPP0004 - GNAT family acetyltransferase 5 68.08 0 4260..5177 + 305 33594728 parB BPP0005 - chromosome partitioning protein ParB 6 71.36 0 5170..6171 + 333 33594729 ansB BPP0006 - L-asparaginase II precursor 7 62.55 -1 6767..7957 + 396 33594730 tuf BPP0007 - elongation factor Tu 8 58.79 -2 8196..8576 + 126 33594731 secE BPP0008 - preprotein translocase subunit SecE 9 54.49 -2 8586..9119 + 177 33594732 nusG BPP0009 - transcription antitermination protein NusG 10 63.43 -1 9183..9614 + 143 33594733 rplK BPP0010 - 50S ribosomal protein L11 11 64.38 0 9617..10315 + 232 33594734 rplA BPP0011 - 50S ribosomal protein L1 12 61.33 -1 10558..11082 + 174 33594735 rplJ BPP0012 - 50S ribosomal protein L10 13 62.50 -1 11164..11547 + 127 33594736 rplL BPP0013 - 50S ribosomal protein L7/L12 14 63.23 -1 11683..15819 + 1378 33594737 rpoB BPP0014 - DNA-directed RNA polymerase subunit beta 15 64.12 0 15819..20063 + 1414 33594738 rpoC BPP0015 - DNA-directed RNA polymerase subunit beta' 16 65.43 0 20172..20576 - 134 33594739 - BPP0016 - putative lipoprotein 17 71.56 0 20817..22043 + 408 33594740 - BPP0017 - hypothetical protein 18 68.38 0 24353..25459 - 368 33594741 - BPP0019 - putative peptidoglycan binding protein 19 62.86 -1 25477..26211 - 244 33594742 - BPP0020 - two-component response regulator 20 68.63 0 26469..27281 + 270 33594743 - BPP0021 - two-component response regulator 21 66.35 0 27311..28246 - 311 33594744 - BPP0022 - putative metal transporter 22 63.77 -1 28252..28527 - 91 33594745 - BPP0023 - hypothetical protein 23 61.11 -1 29104..29481 + 125 33594746 rpsL BPP0024 - 30S ribosomal protein S12 24 59.87 -2 29645..30115 + 156 33594747 rpsG BPP0025 - 30S ribosomal protein S7 25 62.58 -1 30133..32235 + 700 33594748 fusA BPP0026 - elongation factor G 26 62.55 -1 32312..33502 + 396 33594749 tuf BPP0027 - elongation factor Tu 27 59.62 -2 33566..33877 + 103 33594750 rpsJ BPP0028 - 30S ribosomal protein S10 28 65.51 0 34229..34918 + 229 161610405 rplC BPP0029 - 50S ribosomal protein L3 29 61.49 -1 34923..35540 + 205 33594752 rplD BPP0030 - 50S ribosomal protein L4 30 56.90 -2 35537..35833 + 98 33594753 rplW BPP0031 - 50S ribosomal protein L23 31 64.86 0 35834..36661 + 275 33594754 rplB BPP0032 - 50S ribosomal protein L2 32 57.61 -2 36674..36949 + 91 33594755 rpsS BPP0033 - 30S ribosomal protein S19 33 57.27 -2 36953..37282 + 109 33594756 rplV BPP0034 - 50S ribosomal protein L22 34 63.51 -1 37292..38083 + 263 33594757 rpsC BPP0035 - 30S ribosomal protein S3 35 63.31 -1 38086..38502 + 138 33594758 rplP BPP0036 - 50S ribosomal protein L16 36 60.42 -1 38513..38704 + 63 33594759 rpmC BPP0037 - 50S ribosomal protein L29 37 57.80 -2 38706..38987 + 93 33594760 rpsQ BPP0038 - 30S ribosomal protein S17 38 66.32 0 40103..41530 - 475 33594761 - BPP0040 - putative aldehyde dehydrogenase 39 60.43 -1 42425..42793 + 122 33594762 rplN BPP0041 - 50S ribosomal protein L14 40 62.93 -1 42804..43124 + 106 33594763 rplX BPP0042 - 50S ribosomal protein L24 41 57.96 -2 43137..43676 + 179 33594764 rplE BPP0043 - 50S ribosomal protein L5 42 59.15 -2 43689..43994 + 101 33594765 rpsN BPP0044 - 30S ribosomal protein S14 43 61.11 -1 44005..44400 + 131 33594766 rpsH BPP0045 - 30S ribosomal protein S8 44 60.11 -1 44411..44944 + 177 33594767 rplF BPP0046 - 50S ribosomal protein L6 45 64.19 0 44966..45328 + 120 33594768 rplR BPP0047 - 50S ribosomal protein L18 46 61.90 -1 45344..45868 + 174 33594769 rpsE BPP0048 - 30S ribosomal protein S5 47 62.37 -1 45872..46057 + 61 33594770 rpmD BPP0049 - 50S ribosomal protein L30 48 66.21 0 46067..46507 + 146 33594771 rplO BPP0050 - 50S ribosomal protein L15 49 60.41 -1 46522..47847 + 441 33594772 secY BPP0051 - preprotein translocase subunit SecY 50 55.25 -2 47857..48075 + 72 33594773 infA BPP0052 - translation initiation factor IF-1 51 53.51 -2 48110..48223 + 37 33594774 rpmJ BPP0053 - 50S ribosomal protein L36 52 62.57 -1 48265..48630 + 121 33594775 rpsM BPP0054 - 30S ribosomal protein S13 53 63.68 -1 48646..49047 + 133 33594776 rpsK BPP0055 - 30S ribosomal protein S11 54 63.30 -1 49059..49682 + 207 33594777 rpsD BPP0056 - 30S ribosomal protein S4 55 63.73 -1 49897..50883 + 328 33594778 rpoA BPP0057 - DNA-directed RNA polymerase subunit alpha 56 62.12 -1 51042..51437 + 131 33594779 rplQ BPP0058 - 50S ribosomal protein L17 57 63.01 -1 51566..52003 - 145 33594780 - BPP0059 - histidine triad protein 58 61.70 -1 52110..52451 + 113 33594781 cutA BPP0060 - putative periplasmic divalent cation tolerance protein 59 70.43 0 52462..54399 + 645 33594782 - BPP0061 - thiol:disulfide interchange protein 60 69.46 0 54440..55477 + 345 33594783 - BPP0062 - hypothetical protein 61 66.67 0 55474..56490 - 338 33594784 hemB BPP0063 - delta-aminolevulinic acid dehydratase 62 64.74 0 56487..57110 - 207 33594785 - BPP0064 - GTPase EngB 63 66.38 0 57334..58035 + 233 33594786 - BPP0065 - putative cytochrome C precursor 64 66.57 0 58153..60249 + 698 33594787 - BPP0066 - hypothetical protein 65 66.89 0 60259..61593 + 444 33594788 - BPP0067 - putative cytochrome c asssembly protein 66 68.91 0 61664..62953 - 429 33594789 lysA BPP0068 - diaminopimelate decarboxylase 67 63.94 -1 63167..63496 + 109 33594790 cyaY BPP0069 - hypothetical protein 68 66.50 0 63553..65997 - 814 33594791 - BPP0070 - penicillin-binding protein 1A 69 66.35 0 66111..66746 + 211 33594792 aroK BPP0071 - shikimate kinase 70 69.82 0 66746..67822 + 358 33594793 aroB BPP0072 - 3-dehydroquinate synthase 71 66.93 0 67819..68973 + 384 33594794 - BPP0073 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 72 67.75 0 69864..72722 - 952 33594795 uvrA BPP0075 - excinuclease ABC subunit A 73 72.74 +1 72878..74062 + 394 33594796 - BPP0076 - putative transport protein 74 67.69 0 74295..74783 + 162 33594797 ssb BPP0077 - single-strand binding protein 75 61.34 -1 74842..76062 - 406 33594798 - BPP0078 - transposase 76 64.87 0 76330..78444 + 704 33594799 bfrC BPP0079 - ferric siderophore receptor 77 69.25 0 78581..79084 + 167 33594800 - BPP0080 - hypothetical protein 78 66.15 0 79103..79882 + 259 33594801 - BPP0081 - putative aldolase 79 70.11 0 79911..80927 + 338 33594802 - BPP0082 - hypothetical protein 80 65.91 0 80981..81775 + 264 33594803 - BPP0083 - GntR family regulatory proteins 81 69.43 0 81772..82713 - 313 33594804 - BPP0084 - transcriptional regulator 82 67.67 0 82993..84483 + 496 33594805 - BPP0085 - N-ethylammeline chlorohydrolase 83 68.24 0 84522..85412 + 296 33594806 - BPP0086 - hypothetical protein 84 68.67 0 85565..86710 + 381 33594807 - BPP0087 - putative glycosyl transferase 85 68.50 0 86717..87535 + 272 33594808 - BPP0088 - hypothetical protein 86 67.59 0 87695..88666 + 323 33594809 - BPP0089 - LysR family regulatory protein 87 68.66 0 88692..89693 + 333 33594810 - BPP0090 - periplasmic solute-binding protein 88 63.29 -1 89757..90527 + 256 33594811 - BPP0091 - ABC transport system permease protein 89 63.38 -1 90515..91306 + 263 33594812 - BPP0092 - ABC transporter ATP-binding protein 90 68.11 0 91334..92650 + 438 33594813 - BPP0093 - hypothetical protein 91 63.49 -1 92787..92975 - 62 33594814 - BPP0094 - hypothetical protein 92 67.60 0 92984..93628 - 214 33594815 - BPP0095 - TetR family transcriptional regulator 93 69.01 0 93664..95841 - 725 33594816 glcB BPP0096 - malate synthase G 94 67.32 0 96085..96849 + 254 33594817 glcC BPP0097 - DNA-binding transcriptional regulator GlcC 95 68.44 0 96846..97973 - 375 33594818 - BPP0098 - putative dehydrogenase 96 68.48 0 98199..98585 - 128 33594819 - BPP0099 - hypothetical protein 97 67.96 0 98851..99777 - 308 33594820 ubiA BPP0100 - 4-hydroxybenzoate octaprenyltransferase 98 66.67 0 99864..101063 - 399 33594821 - BPP0101 - putative aminotransferase 99 67.88 0 101202..101696 + 164 33594822 - BPP0102 - hypothetical protein 100 71.44 0 101984..102883 + 299 33594823 - BPP0103 - putative dihydrodipicolinate synthase 68.05 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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