IslandPath Analysis: Elusimicrobium minutum Pei191



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 40.07   STD DEV: 3.57
Elusimicrobium minutum Pei191, complete genome - 1..1643562
1529 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 34.45	-1	8..364	+	118	187250424	-	Emin_0001	-	response regulator receiver protein
2	 34.95	-1	556..1914	+	452	187250425	-	Emin_0002	-	chromosomal replication initiator protein DnaA
3	 30.54	-2	2086..3195	+	369	187250426	-	Emin_0003	-	DNA polymerase III, beta subunit
4	 34.68	-1	3195..3491	+	98	187250427	-	Emin_0004	-	hypothetical protein
5	 41.44	0	3576..6053	+	825	187250428	-	Emin_0005	-	DNA gyrase, B subunit
6	 44.39	+1	6138..8660	+	840	187250429	-	Emin_0006	-	DNA gyrase, A subunit
7	 33.02	-1	8828..10114	+	428	187250430	-	Emin_0007	-	hypothetical protein
8	 37.72	0	10136..10888	-	250	187250431	-	Emin_0008	-	hypothetical protein
9	 41.49	0	11167..11742	+	191	187250432	-	Emin_0009	-	rubrerythrin
10	 38.46	0	11837..12343	+	168	187250433	-	Emin_0010	-	redoxin domain-containing protein
11	 40.66	0	12361..12756	+	131	187250434	-	Emin_0011	-	desulfoferrodoxin
12	 40.15	0	12817..14019	+	400	187250435	-	Emin_0012	-	flavodoxin/nitric oxide synthase
13	 36.53	0	14012..14512	+	166	187250436	-	Emin_0013	-	flavin reductase domain-containing protein
14	 50.94	+2	14557..14715	+	52	187250437	-	Emin_0014	-	rubredoxin-type Fe(Cys)4 protein
15	 45.70	+1	14923..15504	-	193	187250438	-	Emin_0015	-	Tfp pilus assembly protein PilE-like protein
16	 38.56	0	15557..16531	-	324	187250439	-	Emin_0016	-	signal peptidase I
17	 37.35	0	16533..17603	-	356	187250440	-	Emin_0017	-	glycosyl transferase group 1
18	 37.79	0	17734..19191	+	485	187250441	-	Emin_0018	-	alpha amylase catalytic region
19	 38.38	0	19230..20141	-	303	187250442	-	Emin_0019	-	Mg2 transporter protein CorA family protein
20	 38.02	0	20308..21054	+	248	187250443	-	Emin_0020	-	purine phosphorylase family 1
21	 41.80	0	21085..23445	-	786	187250444	-	Emin_0021	-	glycoside hydrolase family protein
22	 41.76	0	23670..24998	+	442	187250445	-	Emin_0022	-	PhoH family protein
23	 38.13	0	25155..26030	+	291	187250446	-	Emin_0023	-	integrase family protein
24	 42.97	0	26032..26955	+	307	187250447	-	Emin_0024	-	cysteine synthase A
25	 41.18	0	26938..28275	-	445	187250448	-	Emin_0025	-	TPR repeat-containing protein
26	 38.04	0	28272..29078	-	268	187250449	-	Emin_0026	-	squalene/phytoene synthase
27	 43.06	0	29112..29666	+	184	187250450	-	Emin_0027	-	metal dependent phophohydrolase
28	 42.31	0	30205..32811	-	868	187250451	-	Emin_0028	-	alanyl-tRNA synthetase
29	 38.53	0	32872..33198	+	108	187250452	-	Emin_0029	-	hypothetical protein
30	 43.94	+1	33195..34061	+	288	187250453	-	Emin_0030	-	diacylglycerol kinase catalytic region
31	 39.97	0	34104..34676	-	190	187250454	-	Emin_0031	-	hypothetical protein
32	 43.46	0	34686..35801	-	371	187250455	-	Emin_0032	-	signal peptide peptidase SppA, 36K type
33	 38.85	0	35930..36799	+	289	187250456	-	Emin_0033	-	dihydrodipicolinate synthase
34	 41.12	0	36889..37620	+	243	187250457	-	Emin_0034	-	aspartate kinase
35	 37.43	0	37617..38495	+	292	187250458	-	Emin_0035	-	aspartate-semialdehyde dehydrogenase
36	 40.33	0	38495..39151	+	218	187250459	-	Emin_0036	-	dihydrodipicolinate reductase
37	 41.11	0	39175..40602	+	475	187250460	-	Emin_0037	-	cytoplasmic peptidoglycan synthetase domain-containing protein
38	 41.70	0	41030..41806	-	258	187250461	-	Emin_0038	-	hemolysin A
39	 35.09	-1	41793..42020	-	75	187250462	-	Emin_0039	-	exonuclease VII small subunit
40	 33.33	-1	42028..42498	-	156	187250463	-	Emin_0040	-	hypothetical protein
41	 32.43	-2	42502..42942	-	146	187250464	-	Emin_0041	-	hypothetical protein
42	 43.32	0	42942..44132	-	396	187250465	-	Emin_0042	-	exodeoxyribonuclease VII, large subunit
43	 44.38	+1	44233..45228	-	331	187250466	-	Emin_0043	-	phosphate transporter
44	 37.14	0	45237..45866	-	209	187250467	-	Emin_0044	-	hypothetical protein
45	 41.77	0	46014..47684	+	556	187250468	-	Emin_0045	-	peptidase U62 modulator of DNA gyrase
46	 38.07	0	47684..49288	+	534	187250469	-	Emin_0046	-	Zn-dependent protease-like protein
47	 43.18	0	49347..50960	-	537	187250470	-	Emin_0047	-	hypothetical protein
48	 42.57	0	52019..53989	+	656	187250471	-	Emin_0049	-	D-lactate dehydrogenase (cytochrome)
49	 39.15	0	53982..55202	+	406	187250472	-	Emin_0050	-	Fe-S oxidoreductase-like protein
50	 41.09	0	55168..56391	+	407	187250473	-	Emin_0051	-	metal dependent phosphohydrolase
51	 42.29	0	56489..59089	+	866	187250474	-	Emin_0052	-	preprotein translocase, SecA subunit
52	 42.06	0	59107..60768	+	553	187250475	-	Emin_0053	-	apolipoprotein N-acyltransferase
53	 41.76	0	60761..61876	+	371	187250476	-	Emin_0054	-	peptide chain release factor 2
54	 37.16	0	61901..62998	+	365	187250477	-	Emin_0055	-	oxygen-independent coproporphyrinogen III oxidase
55	 34.04	-1	63000..63704	+	234	187250478	-	Emin_0056	-	hypothetical protein
56	 43.92	+1	63771..64280	-	169	187250479	-	Emin_0057	-	hypothetical protein
57	 41.95	0	64380..65876	+	498	187250480	-	Emin_0058	-	lysyl-tRNA synthetase
58	 41.23	0	65939..66394	-	151	187250481	-	Emin_0059	-	Tfp pilus assembly protein PilE-like protein
59	 40.10	0	66422..66805	-	127	187250482	-	Emin_0060	-	MazG nucleotide pyrophosphohydrolase
60	 39.90	0	66823..68178	+	451	187250483	-	Emin_0061	-	hypothetical protein
61	 42.21	0	68222..68908	+	228	187250484	-	Emin_0062	-	thymidylate synthase, flavin-dependent
62	 41.25	0	68966..70177	+	403	187250485	-	Emin_0063	-	nucleotidyl transferase
63	 40.11	0	70225..71154	+	309	187250486	-	Emin_0064	-	PhoH family protein
64	 39.58	0	71151..71582	+	143	187250487	-	Emin_0065	-	hypothetical protein
65	 41.35	0	71572..71883	-	103	187250488	-	Emin_0066	-	hypothetical protein
66	 40.66	0	71943..72215	+	90	187250489	-	Emin_0067	-	glutamyl-tRNA(Gln) amidotransferase, C subunit
67	 43.93	+1	72219..73643	+	474	187250490	-	Emin_0068	-	glutamyl-tRNA(Gln) amidotransferase, A subunit
68	 43.69	+1	73643..74086	+	147	187250491	-	Emin_0069	-	NUDIX hydrolase
69	 39.75	0	74118..75005	-	295	187250492	-	Emin_0070	-	hypothetical protein
70	 37.91	0	75078..76343	+	421	187250493	-	Emin_0071	-	major facilitator transporter
71	 36.41	-1	76398..76592	+	64	187250494	-	Emin_0072	-	ribosomal protein L28
72	 41.48	0	76689..79007	+	772	187250495	-	Emin_0073	-	outer membrane protein assembly complex, YaeT protein
73	 35.64	-1	79027..79851	+	274	187250496	-	Emin_0074	-	hypothetical protein
74	 41.13	0	79856..80881	+	341	187250497	-	Emin_0075	-	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
75	 40.29	0	80897..81730	+	277	187250498	-	Emin_0076	-	UDP-3-0-acyl N-acetylglucosamine deacetylase
76	 38.99	0	81723..82199	+	158	187250499	-	Emin_0077	-	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
77	 43.91	+1	82276..83079	+	267	187250500	-	Emin_0078	-	acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
78	 40.88	0	83079..83900	+	273	187250501	-	Emin_0079	-	hypothetical protein
79	 34.38	-1	83920..84588	+	222	187250502	-	Emin_0080	-	hypothetical protein
80	 40.79	0	85825..87702	-	625	187250503	-	Emin_0082	-	hypothetical protein
81	 43.69	+1	87725..89191	-	488	187250504	-	Emin_0083	-	glutamyl-tRNA synthetase
82	 39.69	0	89300..90385	+	361	187250505	-	Emin_0084	-	metallophosphoesterase
83	 42.25	0	90391..92016	+	541	187250506	-	Emin_0085	-	glycoside hydrolase family 3 protein
84	 38.25	0	92017..92667	-	216	187250507	-	Emin_0086	-	SNARE associated Golgi protein
85	 40.45	0	92728..93654	+	308	187250508	-	Emin_0087	-	response regulator receiver modulated diguanylate cyclase
86	 41.97	0	93725..94789	-	354	187250509	-	Emin_0088	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
87	 37.88	0	94872..95531	-	219	187250510	-	Emin_0089	-	hypothetical protein
88	 41.90	0	95826..96140	+	104	187250511	-	Emin_0090	-	ribosomal protein L21
89	 41.45	0	96157..96501	+	114	187250512	-	Emin_0091	-	ribosomal protein L27
90	 43.06	0	96723..98099	+	458	187250513	-	Emin_0092	-	GTP-binding protein Obg/CgtA
91	 37.84	0	98122..98631	+	169	187250514	-	Emin_0093	-	Tfp pilus assembly protein PilE-like protein
92	 36.43	-1	99030..99611	+	193	187250515	-	Emin_0094	-	hypothetical protein
93	 35.94	-1	99705..100931	+	408	187250516	-	Emin_0095	-	hypothetical protein
94	 41.67	0	100987..101478	-	163	187250517	-	Emin_0096	-	hypothetical protein
95	 43.02	0	101511..101954	+	147	187250518	-	Emin_0097	-	putative GAF sensor protein
96	 34.87	-1	102056..103030	-	324	187250519	-	Emin_0098	-	hypothetical protein
97	 35.51	-1	103138..104148	-	336	187250520	-	Emin_0099	-	hypothetical protein
98	 45.86	+1	104337..106196	-	619	187250521	-	Emin_0100	-	chaperone protein DnaK
99	 41.53	0	106312..106872	-	186	187250522	-	Emin_0101	-	GrpE protein
100	 40.20	0	106873..107964	-	363	187250523	-	Emin_0102	-	heat-inducible transcription repressor HrcA
40.07	MEAN

3.57	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.