IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS9429



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.31 STD DEV: 3.95
Streptococcus pyogenes MGAS9429, complete genome - 1..1836467
1877 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 33.33	-1	202..1557	+	451	94987632	dnaA	MGAS9429_Spy0001	-	chromosomal replication initiation protein
2	 33.51	-1	1712..2848	+	378	94987633	dnaN	MGAS9429_Spy0002	-	DNA polymerase III subunit beta
3	 32.32	-1	2923..3120	+	65	94987634	-	MGAS9429_Spy0003	-	putative cytoplasmic protein
4	 37.46	0	3450..4565	+	371	94987635	-	MGAS9429_Spy0004	-	translation-associated GTPase
5	 32.03	-1	4590..5204	+	204	94987636	pth	MGAS9429_Spy0005	-	peptidyl-tRNA hydrolase
6	 35.42	0	5207..8710	+	1167	94987637	trcF	MGAS9429_Spy0006	-	transcription-repair coupling factor
7	 30.98	-1	8848..9144	+	98	94987638	-	MGAS9429_Spy0007	-	heat shock protein 15
8	 26.88	-2	9131..9502	+	123	94987639	divIC	MGAS9429_Spy0008	-	cell division protein
9	 26.98	-2	9499..9624	+	41	94987640	-	MGAS9429_Spy0009	-	hypothetical protein
10	 31.70	-1	9637..10923	+	428	94987641	-	MGAS9429_Spy0010	-	beta-lactamase
11	 28.59	-2	10920..12206	+	428	94987642	tilS	MGAS9429_Spy0011	-	tRNA(Ile)-lysidine synthetase
12	 30.39	-2	12211..12753	+	180	94987643	-	MGAS9429_Spy0012	-	hypoxanthine-guanine phosphoribosyltransferase
13	 37.58	0	12775..14754	+	659	94987644	ftsH	MGAS9429_Spy0013	-	cell division protein
14	 32.51	-1	15012..16472	+	486	94987645	-	MGAS9429_Spy0014	-	amino acid permease
15	 28.85	-2	16720..16875	+	51	94987646	-	MGAS9429_Spy0015	-	hypothetical protein
16	 37.68	0	30140..30346	-	68	94987647	-	MGAS9429_Spy0016	-	transposase
17	 40.18	0	30843..32039	+	398	94987648	sibA	MGAS9429_Spy0017	-	secreted protein
18	 39.28	0	32280..33254	+	324	94987649	prsA2	MGAS9429_Spy0018	-	ribose-phosphate pyrophosphokinase
19	 31.35	-1	33440..34195	+	251	94987650	recO	MGAS9429_Spy0019	-	DNA repair protein RecO
20	 37.02	0	34220..35305	+	361	94987651	plsX	MGAS9429_Spy0020	-	putative glycerol-3-phosphate acyltransferase PlsX
21	 31.28	-1	35298..35540	+	80	94987652	acpP2	MGAS9429_Spy0021	-	acyl carrier protein
22	 35.78	0	35661..36395	+	244	94987653	-	MGAS9429_Spy0022	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
23	 44.52	+1	36471..40244	+	1257	94987654	-	MGAS9429_Spy0023	-	phosphoribosylformylglycinamidine synthase
24	 38.49	0	40348..41859	+	503	94987655	purF	MGAS9429_Spy0024	-	amidophosphoribosyltransferase
25	 44.00	+1	41887..42936	+	349	94987656	purM	MGAS9429_Spy0025	-	phosphoribosylaminoimidazole synthetase
26	 46.67	+2	43104..43658	+	184	94987657	purN	MGAS9429_Spy0026	-	phosphoribosylglycinamide formyltransferase
27	 47.09	+2	43842..45389	+	515	94987658	purH	MGAS9429_Spy0027	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
28	 39.64	0	45447..46571	-	374	94987659	-	MGAS9429_Spy0028	-	autolysin
29	 46.50	+2	46677..48089	+	470	94987660	purD	MGAS9429_Spy0029	-	phosphoribosylamine--glycine ligase
30	 50.20	+2	48367..48858	+	163	94987661	purE	MGAS9429_Spy0030	-	phosphoribosylaminoimidazole carboxylase catalytic subunit
31	 50.00	+2	48809..49918	+	369	94987662	purK	MGAS9429_Spy0031	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
32	 28.86	-2	49939..51279	+	446	94987663	-	MGAS9429_Spy0032	-	putative cytoplasmic protein
33	 29.56	-2	51280..51438	-	52	94987664	-	MGAS9429_Spy0033	-	hypothetical protein
34	 44.62	+1	51648..52940	+	430	94987665	purB	MGAS9429_Spy0034	-	adenylosuccinate lyase
35	 29.39	-2	53074..53985	+	303	94987666	-	MGAS9429_Spy0035	-	transcriptional regulator
36	 39.40	0	54139..55209	+	356	94987667	ruvB	MGAS9429_Spy0036	-	Holliday junction DNA helicase B
37	 34.93	0	55347..55784	+	145	94987668	-	MGAS9429_Spy0037	-	protein tyrosine phosphatase
38	 35.32	0	55808..56209	+	133	94987669	-	MGAS9429_Spy0038	-	hypothetical protein
39	 36.37	0	56206..57981	+	591	94987670	-	MGAS9429_Spy0039	-	acyltransferase
40	 40.22	0	58291..60933	+	880	94987671	adh2	MGAS9429_Spy0040	-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase
41	 41.62	0	61128..62201	+	357	94987672	adhA	MGAS9429_Spy0041	-	alcohol dehydrogenase
42	 41.40	0	62589..63878	+	429	94987673	-	MGAS9429_Spy0042	-	Na+ driven multidrug efflux pump
43	 39.81	0	64077..64385	+	102	94987674	rpsJ	MGAS9429_Spy0043	-	30S ribosomal protein S10
44	 41.79	0	64633..65259	+	208	94987675	rplC	MGAS9429_Spy0044	-	50S ribosomal protein L3
45	 42.47	+1	65283..65906	+	207	94987676	rplD	MGAS9429_Spy0045	-	50S ribosomal protein L4
46	 37.71	0	65906..66202	+	98	94987677	rplW	MGAS9429_Spy0046	-	50S ribosomal protein L23
47	 43.53	+1	66220..67053	+	277	94987678	rplB	MGAS9429_Spy0047	-	50S ribosomal protein L2
48	 40.50	0	67193..67471	+	92	162139092	rpsS	MGAS9429_Spy0048	-	30S ribosomal protein S19
49	 39.71	0	67487..67831	+	114	94987680	rplV	MGAS9429_Spy0049	-	50S ribosomal protein L22
50	 41.59	0	67844..68497	+	217	94987681	rpsC	MGAS9429_Spy0050	-	30S ribosomal protein S3
51	 43.24	+1	68501..68914	+	137	94987682	rplP	MGAS9429_Spy0051	-	50S ribosomal protein L16
52	 35.27	0	68924..69130	+	68	94987683	rpmC	MGAS9429_Spy0052	-	50S ribosomal protein L29
53	 38.31	0	69156..69416	+	86	94987684	rpsQ	MGAS9429_Spy0053	-	30S ribosomal protein S17
54	 44.17	+1	69441..69809	+	122	94987685	rplN	MGAS9429_Spy0054	-	50S ribosomal protein L14
55	 36.60	0	69888..70193	+	101	94987686	rplX	MGAS9429_Spy0055	-	50S ribosomal protein L24
56	 40.70	0	70217..70759	+	180	94987687	rplE	MGAS9429_Spy0056	-	50S ribosomal protein L5
57	 39.25	0	70775..70960	+	61	94987688	rpsN	MGAS9429_Spy0057	-	30S ribosomal protein S14
58	 36.84	0	71111..71509	+	132	94987689	rpsH	MGAS9429_Spy0058	-	30S ribosomal protein S8
59	 39.11	0	71712..72248	+	178	94987690	rplF	MGAS9429_Spy0059	-	50S ribosomal protein L6
60	 45.36	+1	72344..72709	+	121	94987691	rplR	MGAS9429_Spy0060	-	50S ribosomal protein L18
61	 42.63	+1	72728..73222	+	164	94987692	rpsE	MGAS9429_Spy0061	-	30S ribosomal protein S5
62	 37.16	0	73237..73419	+	60	94987693	rpmD	MGAS9429_Spy0062	-	50S ribosomal protein L30
63	 39.68	0	73634..74074	+	146	94987694	rplO	MGAS9429_Spy0063	-	50S ribosomal protein L15
64	 36.40	0	74091..75395	+	434	162139091	secY	MGAS9429_Spy0064	-	preprotein translocase subunit SecY
65	 39.44	0	75545..76183	+	212	94987696	adk	MGAS9429_Spy0065	-	adenylate kinase
66	 38.10	0	76247..76519	+	90	94987697	infA	MGAS9429_Spy0066	-	translation initiation factor IF-1
67	 37.61	0	76545..76661	+	38	94987698	rpmJ	MGAS9429_Spy0067	-	50S ribosomal protein L36
68	 39.34	0	76679..77044	+	121	94987699	rpsM	MGAS9429_Spy0068	-	30S ribosomal protein S13
69	 44.01	+1	77062..77445	+	127	94987700	rpsK	MGAS9429_Spy0069	-	30S ribosomal protein S11
70	 37.91	0	77491..78429	+	312	94987701	rpoA	MGAS9429_Spy0070	-	DNA-directed RNA polymerase subunit alpha
71	 40.57	0	78444..78830	+	128	94987702	rplQ	MGAS9429_Spy0071	-	50S ribosomal protein L17
72	 35.56	0	79426..79560	-	44	94987703	-	MGAS9429_Spy0072	-	hypothetical protein
73	 42.47	+1	86072..86257	+	61	94987704	-	MGAS9429_Spy0073	-	hypothetical protein
74	 36.19	0	86760..86864	+	34	94987705	-	MGAS9429_Spy0074	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
75	 42.39	+1	86895..87203	+	102	94987706	-	MGAS9429_Spy0075	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
76	 38.60	0	87243..87470	+	75	94987707	-	MGAS9429_Spy0076	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
77	 34.46	0	87580..88023	+	147	94987708	adcR	MGAS9429_Spy0077	-	MarR family transcriptional regulator
78	 41.25	0	88027..88746	+	239	94987709	adcC	MGAS9429_Spy0078	-	high-affinity zinc uptake system ATP-binding protein
79	 38.71	0	88700..89554	+	284	94987710	adcB	MGAS9429_Spy0079	-	high-affinity zinc uptake system membrane protein
80	 40.62	0	89594..89977	-	127	94987711	-	MGAS9429_Spy0080	-	adenosine 5'-monophosphoramidase
81	 41.93	0	90028..91284	-	418	94987712	tyrS	MGAS9429_Spy0081	-	tyrosyl-tRNA synthetase
82	 40.34	0	91376..93688	+	770	94987713	pbp1b	MGAS9429_Spy0082	-	multimodular transpeptidase-transglycosylase PBP 1B
83	 42.83	+1	93952..96837	+	961	94987714	rpoB	MGAS9429_Spy0083	-	DNA-directed RNA polymerase beta chain
84	 44.53	+1	96795..97544	+	249	94987715	-	MGAS9429_Spy0084	-	DNA-directed RNA polymerase beta chain
85	 44.07	+1	97635..101258	+	1207	94987716	rpoC	MGAS9429_Spy0085	-	DNA-directed RNA polymerase subunit beta'
86	 34.70	0	101410..101775	+	121	94987717	-	MGAS9429_Spy0086	-	putative DNA binding protein
87	 37.38	0	101868..102806	+	312	94987718	comYA	MGAS9429_Spy0087	-	ComG operon protein 1
88	 34.89	0	102685..103776	+	363	94987719	comYB	MGAS9429_Spy0088	-	ComG operon protein 2
89	 33.64	-1	103778..104104	+	108	94987720	comYC	MGAS9429_Spy0089	-	ComG operon protein 3
90	 34.27	-1	104079..104507	+	142	94987721	-	MGAS9429_Spy0090	-	ComG operon protein 4
91	 37.54	0	104464..104748	+	94	94987722	-	MGAS9429_Spy0091	-	hypothetical protein
92	 35.63	0	104741..105175	+	144	94987723	comYD	MGAS9429_Spy0092	-	ComG operon protein 6
93	 35.78	0	105159..105485	+	108	94987724	-	MGAS9429_Spy0093	-	ComG operon protein 6
94	 37.94	0	105538..106536	+	332	94987725	-	MGAS9429_Spy0094	-	adenine-specific methyltransferase
95	 38.68	0	106595..107791	+	398	94987726	ackA	MGAS9429_Spy0095	-	acetate kinase
96	 35.92	0	107978..108286	+	102	94987727	-	MGAS9429_Spy0096	-	hypothetical protein
97	 43.58	+1	108369..109139	-	256	94987728	proC	MGAS9429_Spy0097	-	pyrroline-5-carboxylate reductase
98	 45.88	+1	109187..110254	-	355	94987729	pepA	MGAS9429_Spy0098	-	glutamyl aminopeptidase
99	 37.58	0	110364..110528	-	54	94987730	-	MGAS9429_Spy0099	-	hypothetical protein
100	 36.43	0	110710..111000	+	96	94987731	-	MGAS9429_Spy0100	-	hypothetical protein
38.31	MEAN

3.95	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.