IslandPath Analysis: Burkholderia multivorans ATCC 17616



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 66.98   STD DEV: 4.49
Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence - 1..3448421
3084 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 63.08	0	493..1608	-	371	189348894	-	BMULJ_00001	-	hypothetical protein
2	 64.86	0	1626..2840	-	404	189348895	-	BMULJ_00002	-	sodium/hydrogen exchanger family protein
3	 70.92	0	3515..5488	-	657	189348896	-	BMULJ_00003	-	hypothetical protein
4	 60.57	-1	5878..6156	+	92	189348897	hupB	BMULJ_00004	-	DNA-binding protein HU-beta
5	 67.20	0	6272..7573	-	433	189348898	-	BMULJ_00005	-	cobalamin biosynthesis protein
6	 63.83	0	7737..8159	-	140	189348899	-	BMULJ_00006	-	hypothetical protein
7	 67.58	0	8567..10873	+	768	189348900	gspD	BMULJ_00007	-	general secretion pathway protein D
8	 68.74	0	10870..12366	+	498	189348901	gspE	BMULJ_00008	-	general secretion pathway protein E
9	 68.80	0	12371..13588	+	405	189348902	gspF	BMULJ_00009	-	general secretion pathway protein F
10	 72.75	+1	13619..14029	-	136	189348903	gspC	BMULJ_00010	-	general secretion pathway protein C
11	 63.13	0	14207..14659	+	150	189348904	gspG	BMULJ_00011	-	general secretion pathway protein G
12	 72.51	+1	14699..15331	+	210	189348905	gspH	BMULJ_00012	-	general secretion pathway protein H
13	 70.89	0	15346..15771	+	141	189348906	gspI	BMULJ_00013	-	general secretion pathway protein I
14	 71.41	0	15749..16444	+	231	189348907	gspJ	BMULJ_00014	-	general secretion pathway protein J
15	 71.11	0	16451..17575	+	374	189348908	gspK	BMULJ_00015	-	general secretion pathway protein K
16	 73.49	+1	17600..19006	+	468	189348909	gspL	BMULJ_00016	-	general secretion pathway protein L
17	 69.03	0	19003..19509	+	168	189348910	gspM	BMULJ_00017	-	general secretion pathway protein M
18	 72.24	+1	19541..20329	+	262	189348911	gspN	BMULJ_00018	-	general secretion pathway protein N
19	 71.34	0	20375..21958	-	527	189348912	-	BMULJ_00019	-	RND efflux system outer membrane lipoprotein
20	 71.23	0	22154..22438	-	94	189348913	-	BMULJ_00020	-	putative ABC-type multidrug/protein/lipid transport system ATPase component
21	 68.30	0	22603..23091	+	162	189348914	-	BMULJ_00021	-	MarR family transcriptional regulator
22	 66.86	0	23252..24814	+	520	189348915	emrB	BMULJ_00022	-	multidrug resistance protein B
23	 69.36	0	24903..25829	-	308	189348916	-	BMULJ_00023	-	LysR family transcriptional regulator
24	 74.27	+1	25969..26415	+	148	189348917	cidA	BMULJ_00024	-	holin-like protein
25	 68.33	0	26441..27163	+	240	189348918	-	BMULJ_00025	-	LrgB-like protein
26	 68.16	0	27242..27775	+	177	189348919	fliL	BMULJ_00026	-	flagellar FliL protein
27	 63.46	0	27798..28796	+	332	189348920	fliM	BMULJ_00027	-	flagellar motor switch protein
28	 68.54	0	28789..29268	+	159	189348921	fliN	BMULJ_00028	-	flagellar motor switch protein
29	 76.04	+2	29265..29840	+	191	189348922	fliO	BMULJ_00029	-	flagellar protein
30	 65.75	0	29882..30643	+	253	189348923	fliP	BMULJ_00030	-	flagellar biosynthetic protein
31	 69.23	0	30660..30932	+	90	189348924	fliQ	BMULJ_00031	-	flagellar biosynthetic protein
32	 68.20	0	30956..31738	+	260	189348925	fliR	BMULJ_00032	-	flagellar biosynthetic protein
33	 60.49	-1	31837..32322	-	161	189348926	-	BMULJ_00033	-	hypothetical protein
34	 67.76	0	32886..33890	+	334	189348927	ssuA	BMULJ_00034	-	sulfonate/nitrate/taurine transport system substrate-binding protein
35	 65.66	0	33998..34795	+	265	189348928	ssuB	BMULJ_00035	-	sulfonate/nitrate/taurine transport system ATP-binding protein
36	 67.25	0	34812..35669	+	285	189348929	ssuC	BMULJ_00036	-	sulfonate/nitrate/taurine transport system permease protein
37	 69.88	0	35755..37122	+	455	189348930	-	BMULJ_00037	-	signal transduction histidine kinase
38	 67.40	0	37136..37813	+	225	189348931	-	BMULJ_00038	-	signal transduction response regulator
39	 63.40	0	38089..39222	+	377	189348932	-	BMULJ_00039	-	outer membrane porin
40	 61.99	-1	39270..39911	-	213	189348933	-	BMULJ_00040	-	signal transduction response regulator
41	 67.61	0	40376..42382	+	668	189348934	mod	BMULJ_00041	-	adenine-specific DNA methyltransferase
42	 68.09	0	42382..45408	+	1008	189348935	res	BMULJ_00042	-	type III restriction enzyme
43	 68.85	0	45627..45992	-	121	189348936	-	BMULJ_00043	-	hypothetical protein
44	 69.02	0	46199..46453	-	84	189348937	-	BMULJ_00044	-	hypothetical protein
45	 69.76	0	46509..46799	-	96	189348938	-	BMULJ_00045	-	hypothetical protein
46	 67.82	0	47044..48000	-	318	189348939	-	BMULJ_00046	-	hypothetical protein
47	 68.15	0	48041..49255	-	404	189348940	-	BMULJ_00047	-	hypothetical protein
48	 61.18	-1	49260..49496	-	78	189348941	-	BMULJ_00048	-	hypothetical protein
49	 66.24	0	49882..50355	+	157	189348942	-	BMULJ_00049	-	hypothetical protein
50	 67.13	0	50355..51224	+	289	189348943	-	BMULJ_00050	-	ECF subfamily RNA polymerase sigma-70 factor
51	 66.08	0	54523..56055	+	510	189348944	-	BMULJ_00053	-	ISBmu1c transposase
52	 58.59	-1	56850..58211	+	453	189348945	-	BMULJ_00055	-	ISBmu4 transposase
53	 56.99	-2	59417..60997	+	526	189348946	-	BMULJ_00058	-	hypothetical protein
54	 61.53	-1	61426..62067	+	213	189348947	-	BMULJ_00059	-	hypothetical protein
55	 60.03	-1	62695..63282	+	195	189348948	-	BMULJ_00060	-	hypothetical protein
56	 56.49	-2	63970..64431	+	153	189348949	-	BMULJ_00061	-	hypothetical protein
57	 58.25	-1	64455..65393	+	312	189348950	-	BMULJ_00062	-	hypothetical protein
58	 69.16	0	65788..66429	-	213	189348951	-	BMULJ_00063	-	anti-sigma factor
59	 68.40	0	66546..67064	-	172	189348952	-	BMULJ_00064	-	ECF subfamily RNA polymerase sigma-70 factor
60	 70.79	0	67220..68311	+	363	189348953	-	BMULJ_00065	-	catalase
61	 63.11	0	68308..68841	+	177	189348954	-	BMULJ_00066	-	putative cytochrome B561
62	 58.98	-1	69560..70600	+	346	189348955	-	BMULJ_00067	-	hypothetical protein
63	 63.35	0	70717..73191	-	824	189348956	gyrB	BMULJ_00068	-	DNA gyrase subunit B
64	 63.78	0	73383..74489	-	368	189348957	dnaN	BMULJ_00069	-	DNA polymerase III, beta chain
65	 65.78	0	74658..76232	-	524	189348958	dnaA	BMULJ_00070	-	chromosomal replication initiator protein
66	 63.70	0	76651..76785	+	44	189348959	rpmH	BMULJ_00071	-	large subunit ribosomal protein L34
67	 67.16	0	76855..77262	+	135	189348960	rnpA	BMULJ_00072	-	ribonuclease P
68	 64.42	0	77339..77605	+	88	189348961	-	BMULJ_00073	-	hypothetical protein
69	 64.26	0	77614..79275	+	553	189348962	yidC	BMULJ_00074	-	preprotein translocase YidC subunit
70	 63.91	0	79378..79812	-	144	189348963	-	BMULJ_00075	-	hypothetical protein
71	 69.75	0	80147..81541	+	464	189348964	thdF	BMULJ_00076	-	tRNA modification GTPase
72	 57.50	-2	81645..81764	-	39	189348965	-	BMULJ_00077	-	putative lipoprotein
73	 67.07	0	81978..82226	-	82	189348966	-	BMULJ_00078	-	hypothetical protein
74	 63.74	0	82303..82473	-	56	189348967	-	BMULJ_00079	-	hypothetical protein
75	 59.48	-1	82623..83165	+	180	189348968	speG	BMULJ_00080	-	diamine N-acetyltransferase
76	 60.34	-1	83619..83966	+	115	189348969	-	BMULJ_00081	-	hypothetical protein
77	 67.03	0	84157..84711	+	184	189348970	-	BMULJ_00082	-	probable YaeQ family protein
78	 69.57	0	84736..85149	-	137	189348971	-	BMULJ_00083	-	glyoxalase/bleomycin resistance protein/dioxygenase
79	 71.31	0	85528..86625	+	365	189348972	ada	BMULJ_00084	-	methylated-DNA-[protein]-cysteine S-methyltransferase
80	 73.35	+1	86622..87593	+	323	189348973	alkA	BMULJ_00085	-	DNA-3-methyladenine glycosylase II
81	 66.29	0	87899..89500	+	533	189348974	gshA	BMULJ_00086	-	glutamate-cysteine ligase
82	 68.91	0	89597..89908	-	103	189348975	-	BMULJ_00087	-	hypothetical protein
83	 67.63	0	90262..91926	+	554	189348976	-	BMULJ_00088	-	LctP family lactate transporter
84	 68.18	0	92063..92788	+	241	189348977	-	BMULJ_00089	-	GntR family transcriptional regulator
85	 69.33	0	92914..94302	-	462	189348978	-	BMULJ_00090	-	sarcosine oxidase
86	 67.90	0	94372..95502	-	376	189348979	phnW	BMULJ_00091	-	2-aminoethylphosphonate-pyruvate transaminase
87	 66.55	0	95549..97276	-	575	189348980	-	BMULJ_00092	-	iron(III) transport system permease protein
88	 67.58	0	97273..98364	-	363	189348981	potA	BMULJ_00093	-	spermidine/putrescine transport system ATP-binding protein
89	 65.06	0	98456..99511	-	351	189348982	-	BMULJ_00094	-	iron(III) transport system substrate-binding protein
90	 66.59	0	99721..100959	+	412	189348983	-	BMULJ_00095	-	phosphonoacetate hydrolase
91	 65.43	0	100984..102438	+	484	189348984	gapN	BMULJ_00096	-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
92	 71.84	+1	102462..103370	-	302	189348985	-	BMULJ_00097	-	hypothetical protein
93	 66.42	0	103959..104363	+	134	189348986	-	BMULJ_00099	-	phenylacetic acid degradation-related protein
94	 68.97	0	104372..105238	+	288	189348987	-	BMULJ_00100	-	patatin-like phospholipase
95	 65.38	0	105258..106271	-	337	189348988	serA	BMULJ_00101	-	D-3-phosphoglycerate dehydrogenase
96	 66.76	0	106695..107744	+	349	189348989	-	BMULJ_00102	-	LysR family transcriptional regulator
97	 63.93	0	107884..110481	-	865	189348990	topB	BMULJ_00103	-	DNA topoisomerase type I
98	 67.98	0	110685..111065	-	126	189348991	-	BMULJ_00104	-	thiol-disulfide isomerase
99	 75.20	+1	111103..112380	-	425	189348992	smf	BMULJ_00105	-	DNA processing protein
100	 62.10	-1	112612..113115	+	167	189348993	def	BMULJ_00106	-	polypeptide deformylase
66.98	MEAN

4.49	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.