IslandPath Analysis: Maricaulis maris MCS10



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.87   STD DEV: 3.31
Maricaulis maris MCS10, complete genome - 1..3368780
3063 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 62.73	0	14..1462	+	482	114568555	-	Mmar10_0001	-	chromosomal replication initiator protein DnaA
2	 62.38	0	1671..2789	+	372	114568556	-	Mmar10_0002	-	DNA polymerase III subunit beta
3	 68.66	+1	2807..3961	+	384	114568557	-	Mmar10_0003	-	DNA replication and repair protein RecF
4	 65.13	0	3971..4750	-	259	114568558	-	Mmar10_0004	-	abortive infection protein
5	 63.01	0	4854..5510	+	218	114568559	-	Mmar10_0005	-	TetR family transcriptional regulator
6	 62.42	0	5786..7198	+	470	114568560	-	Mmar10_0006	-	hypothetical protein
7	 59.37	-1	7202..8146	+	314	114568561	-	Mmar10_0007	-	hypothetical protein
8	 62.30	0	8152..8952	+	266	114568562	-	Mmar10_0008	-	transglutaminase domain-containing protein
9	 60.25	0	8987..9718	+	243	114568563	-	Mmar10_0009	-	20S proteasome, A and B subunits
10	 65.22	0	9745..10368	+	207	114568564	-	Mmar10_0010	-	lysine exporter protein LysE/YggA
11	 65.25	0	10493..11269	+	258	114568565	-	Mmar10_0011	-	glycosyl transferase family protein
12	 65.89	0	11266..12939	+	557	114568566	-	Mmar10_0012	-	glycosyl transferase family protein
13	 67.66	+1	12936..13643	+	235	114568567	-	Mmar10_0013	-	hypothetical protein
14	 63.00	0	13717..16119	+	800	114568568	gyrB	Mmar10_0014	-	DNA gyrase subunit B
15	 61.89	0	16395..17399	-	334	114568569	-	Mmar10_0015	-	hypothetical protein
16	 62.18	0	17462..20248	-	928	114568570	-	Mmar10_0016	-	DNA polymerase I
17	 65.14	0	20460..20918	-	152	114568571	-	Mmar10_0017	-	hypothetical protein
18	 62.31	0	21124..23328	-	734	114568572	-	Mmar10_0018	-	prolyl oligopeptidase
19	 65.42	0	23347..24231	+	294	114568573	-	Mmar10_0019	-	diaminopimelate epimerase
20	 64.55	0	24340..25662	+	440	114568574	-	Mmar10_0020	-	hypothetical protein
21	 64.29	0	25699..26076	-	125	114568575	-	Mmar10_0021	-	hypothetical protein
22	 61.93	0	26234..26761	+	175	114568576	-	Mmar10_0022	-	hypothetical protein
23	 63.95	0	26831..29074	-	747	114568577	-	Mmar10_0023	-	TonB-dependent receptor
24	 64.88	0	29256..30038	-	260	114568578	-	Mmar10_0024	-	short-chain dehydrogenase/reductase SDR
25	 66.44	+1	30197..31060	+	287	114568579	-	Mmar10_0025	-	asparaginase
26	 62.38	0	31060..31596	+	178	114568580	-	Mmar10_0026	-	tRNA/rRNA methyltransferase (SpoU)
27	 66.67	+1	31686..32222	+	178	114568581	-	Mmar10_0027	-	hypothetical protein
28	 62.89	0	32307..33497	+	396	114568582	-	Mmar10_0028	-	radical SAM protein
29	 64.34	0	33494..34354	+	286	114568583	-	Mmar10_0029	-	GCN5-related N-acetyltransferase
30	 60.40	0	34433..34783	+	116	114568584	-	Mmar10_0030	-	hypothetical protein
31	 64.20	0	34780..36237	+	485	114568585	-	Mmar10_0031	-	methyl-accepting chemotaxis sensory transducer
32	 65.07	0	36238..36990	-	250	114568586	-	Mmar10_0032	-	hypothetical protein
33	 62.47	0	37336..38097	+	253	114568587	-	Mmar10_0033	-	creatininase
34	 67.56	+1	38101..38661	+	186	114568588	-	Mmar10_0034	-	hypothetical protein
35	 65.42	0	38809..39288	+	159	114568589	-	Mmar10_0035	-	hypothetical protein
36	 68.45	+1	39289..39624	-	111	114568590	-	Mmar10_0036	-	Rieske (2Fe-2S) domain-containing protein
37	 63.95	0	39624..39917	-	97	114568591	-	Mmar10_0037	-	YCII-related
38	 66.27	+1	39917..40918	-	333	114568592	gpsA	Mmar10_0038	-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
39	 68.87	+1	40915..42048	-	377	114568593	-	Mmar10_0039	-	O-sialoglycoprotein endopeptidase
40	 67.49	+1	42086..43051	+	321	114568594	-	Mmar10_0040	-	porphobilinogen deaminase
41	 64.63	0	43048..43785	+	245	114568595	-	Mmar10_0041	-	uroporphyrinogen III synthase HEM4
42	 67.05	+1	43819..45132	+	437	114568596	-	Mmar10_0042	-	hypothetical protein
43	 67.61	+1	45129..46607	+	492	114568597	-	Mmar10_0043	-	HemY domain-containing protein
44	 62.89	0	46613..47248	+	211	114568598	-	Mmar10_0044	-	uridine kinase
45	 62.09	0	47770..48621	+	283	114568599	-	Mmar10_0045	-	glutathione S-transferase-like protein
46	 63.32	0	48694..50604	-	636	114568600	-	Mmar10_0046	-	putative secreted protein
47	 63.81	0	50631..51329	-	232	114568601	-	Mmar10_0047	-	hypothetical protein
48	 55.42	-2	51418..51897	-	159	114568602	-	Mmar10_0048	-	bacterioferritin
49	 61.49	0	52313..53104	-	263	114568603	-	Mmar10_0049	-	hypothetical protein
50	 58.75	-1	53205..53621	-	138	114568604	-	Mmar10_0050	-	response regulator receiver protein
51	 63.77	0	53692..54588	-	298	114568605	-	Mmar10_0051	-	methenyltetrahydrofolate cyclohydrolase
52	 62.39	0	54569..54895	-	108	114568606	-	Mmar10_0052	-	hypothetical protein
53	 57.00	-1	54902..55201	-	99	114568607	-	Mmar10_0053	-	protein of unknown function YGGT
54	 62.11	0	55573..55989	-	138	114568608	-	Mmar10_0054	-	response regulator receiver protein
55	 62.00	0	56218..56817	+	199	114568609	-	Mmar10_0055	-	XRE family transcriptional regulator
56	 63.20	0	56895..57356	+	153	114568610	-	Mmar10_0056	-	hypothetical protein
57	 59.57	0	57363..57644	-	93	114568611	phhB	Mmar10_0057	-	pterin-4-alpha-carbinolamine dehydratase
58	 60.00	0	57668..58672	-	334	114568612	-	Mmar10_0058	-	biotin synthase
59	 64.43	0	58734..59090	+	118	114568613	-	Mmar10_0059	-	VanZ family protein
60	 63.03	0	59137..60648	-	503	114568614	-	Mmar10_0060	-	amino acid carrier protein
61	 63.12	0	60802..62127	+	441	114568615	-	Mmar10_0061	-	peptidase S41
62	 63.68	0	62139..63110	-	323	114568616	-	Mmar10_0062	-	putative FemAB family protein
63	 63.31	0	63371..63847	+	158	114568617	-	Mmar10_0063	-	hypothetical protein
64	 64.72	0	64347..64757	-	136	114568618	-	Mmar10_0064	-	hypothetical protein
65	 61.67	0	64760..65059	-	99	114568619	-	Mmar10_0065	-	ArsR family transcriptional regulator
66	 62.63	0	65162..65533	-	123	114568620	-	Mmar10_0066	-	hypothetical protein
67	 61.15	0	65712..66671	-	319	114568621	-	Mmar10_0067	-	ABC transporter related
68	 62.63	0	66763..66960	+	65	114568622	-	Mmar10_0068	-	hypothetical protein
69	 65.03	0	67012..68541	+	509	114568623	-	Mmar10_0069	-	anion transporter
70	 65.07	0	69403..69903	-	166	114568624	-	Mmar10_0070	-	hypothetical protein
71	 62.14	0	69961..70512	-	183	114568625	-	Mmar10_0071	-	hypothetical protein
72	 64.22	0	70509..71081	-	190	114568626	-	Mmar10_0072	-	hypothetical protein
73	 63.90	0	71128..72828	-	566	114568627	-	Mmar10_0073	-	hypothetical protein
74	 60.62	0	72997..73707	+	236	114568628	-	Mmar10_0074	-	two component transcriptional regulator
75	 65.68	0	73718..75340	+	540	114568629	-	Mmar10_0075	-	periplasmic sensor signal transduction histidine kinase
76	 60.78	0	75406..75813	+	135	114568630	-	Mmar10_0076	-	PTS system fructose subfamily IIA component
77	 59.42	-1	75810..76085	+	91	114568631	-	Mmar10_0077	-	HPr family phosphocarrier protein
78	 67.30	+1	76179..78230	-	683	114568632	-	Mmar10_0078	-	hypothetical protein
79	 64.88	0	78437..78883	+	148	114568633	-	Mmar10_0079	-	TonB family protein
80	 64.58	0	79152..81641	+	829	114568634	-	Mmar10_0080	-	PAS/PAC sensor signal transduction histidine kinase
81	 61.06	0	81675..81995	-	106	114568635	-	Mmar10_0081	-	ferredoxin
82	 63.10	0	82099..82575	+	158	114568636	-	Mmar10_0082	-	hypothetical protein
83	 65.12	0	82565..83662	+	365	114568637	-	Mmar10_0083	-	aminoglycoside phosphotransferase
84	 66.81	+1	83659..84372	+	237	114568638	-	Mmar10_0084	-	nucleotidyl transferase
85	 68.11	+1	84369..87419	+	1016	114568639	-	Mmar10_0085	-	hypothetical protein
86	 66.55	+1	87416..90967	+	1183	114568640	-	Mmar10_0086	-	DNA helicase/exodeoxyribonuclease V, subunit A
87	 58.57	-1	91049..91369	+	106	114568641	-	Mmar10_0087	-	thioredoxin
88	 66.67	+1	91460..92653	-	397	114568642	-	Mmar10_0088	-	FolC bifunctional protein
89	 64.00	0	92778..93713	-	311	114568643	-	Mmar10_0089	-	acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
90	 66.54	+1	93760..94557	-	265	114568644	-	Mmar10_0090	-	tryptophan synthase, alpha chain
91	 60.27	0	95059..95355	-	98	114568645	-	Mmar10_0091	-	hypothetical protein
92	 60.64	0	95330..95611	-	93	114568646	-	Mmar10_0092	-	hypothetical protein
93	 64.96	0	95696..96928	-	410	114568647	-	Mmar10_0093	-	tryptophan synthase subunit beta
94	 63.99	0	96957..97592	-	211	114568648	-	Mmar10_0094	-	phosphoribosylanthranilate isomerase
95	 63.62	0	97891..98841	-	316	114568649	-	Mmar10_0095	-	LysR family transcriptional regulator
96	 67.37	+1	99089..99799	-	236	114568650	-	Mmar10_0096	-	hypothetical protein
97	 61.11	0	99883..100188	-	101	114568651	-	Mmar10_0097	-	integration host factor, beta subunit
98	 62.02	0	100330..102030	-	566	114568652	rpsA	Mmar10_0098	-	30S ribosomal protein S1
99	 66.03	0	102222..102848	-	208	114568653	-	Mmar10_0099	-	cytidylate kinase
100	 67.11	+1	102845..104188	-	447	114568654	-	Mmar10_0100	-	3-phosphoshikimate 1-carboxyvinyltransferase
62.87	MEAN

3.31	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.