version 1.0
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, complete genome - 1..4888768 4650 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 56.03 0 337..2799 + 820 194450909 thrA SeHA_C0002 - aspartokinase/homoserine dehydrogenase I 2 57.74 0 2801..3730 + 309 194451411 thrB SeHA_C0003 - homoserine kinase 3 56.49 0 3734..5020 + 428 194450589 thrC SeHA_C0004 - threonine synthase 4 50.52 0 5113..5886 - 257 194449329 - SeHA_C0005 - protein YaaA 5 55.97 0 5965..7422 - 485 194447372 - SeHA_C0006 - amino-acid carrier protein AlsT 6 54.09 0 7664..8617 + 317 194447995 tal2 SeHA_C0007 - transaldolase 7 55.84 0 8728..9318 + 196 194448501 mog SeHA_C0008 - molybdopterin biosynthesis protein Mog 8 54.14 0 9375..9941 - 188 194449286 - SeHA_C0009 - membrane protein, GPR1/FUN34/yaaH family 9 54.20 0 10091..10804 - 237 194447756 - SeHA_C0010 - positive regulator for sigma H 10 49.75 0 10840..11235 - 131 194447911 - SeHA_C0011 - protein YaaI 11 30.95 -2 11299..11424 + 41 194451127 - SeHA_C0012 - hypothetical protein 12 52.63 0 11593..13509 + 638 194451865 dnaK SeHA_C0013 - chaperone protein DnaK 13 54.12 0 13595..14734 + 379 194451551 dnaJ SeHA_C0014 - chaperone protein DnaJ 14 27.19 -2 14846..14959 + 37 194450726 - SeHA_C0015 - hypothetical protein 15 40.40 -1 15015..15962 + 315 194449168 - SeHA_C0016 - putative transcriptional regulator 16 39.93 -1 16131..16433 + 100 194447356 - SeHA_C0017 - putative bacteriophage protein 17 51.12 0 16494..17027 - 177 194448797 - SeHA_C0018 - hypothetical protein 18 38.51 -2 17044..17487 - 147 194450738 - SeHA_C0019 - hypothetical protein 19 51.14 0 17868..19967 + 699 194450498 - SeHA_C0020 - exochitinase 20 54.72 0 20059..23055 + 998 194449860 - SeHA_C0021 - putative hydroxymethyltransferase 21 47.09 0 23336..24040 + 234 194450804 - SeHA_C0022 - putative cytoplasmic protein 22 55.25 0 24557..25537 + 326 194448112 - SeHA_C0023 - IS5 transposase 23 52.41 0 25693..26211 + 172 194447857 - SeHA_C0024 - fimbrial subunit 24 50.97 0 26171..26998 + 275 194447750 - SeHA_C0025 - chaperone protein FimC 25 54.48 0 26958..29624 + 888 194449449 - SeHA_C0026 - outer membrane usher protein FimD 26 50.30 0 29625..30632 + 335 194448823 - SeHA_C0027 - mannose binding protein FimH 27 49.42 0 30663..31178 + 171 194450483 - SeHA_C0028 - fimbrial subunit 28 56.07 0 31194..31712 + 172 194449817 - SeHA_C0029 - fimbrial subunit 29 55.03 0 31774..32409 + 211 194451463 - SeHA_C0030 - fimbrial chaparone 30 54.73 0 32474..33319 + 281 194448411 - SeHA_C0031 - BcfH 31 40.44 -1 33745..34194 - 149 194449400 - SeHA_C0033 - hypothetical protein 32 48.33 0 35657..35776 - 39 194450329 - SeHA_C0036 - hypothetical protein 33 39.08 -2 36110..36874 + 254 194449885 - SeHA_C0037 - hypothetical protein 34 49.87 0 36895..38388 + 497 194451527 - SeHA_C0038 - sulfatase 35 48.96 0 38492..39688 + 398 194451770 - SeHA_C0039 - chondroitin sulfate/heparin utilization regulation protein 36 49.92 0 39706..40959 + 417 194451119 - SeHA_C0040 - putative cytoplasmic protein 37 56.13 0 41647..42813 + 388 194449159 nhaA SeHA_C0043 - Na+/H+ antiporter NhaA 38 51.01 0 42881..43774 + 297 194448540 - SeHA_C0044 - transcriptional activator protein NhaR 39 54.51 0 43829..45868 - 679 194451435 - SeHA_C0045 - glycoside hydrolase, family 31 40 49.27 0 45908..47281 - 457 194448790 - SeHA_C0046 - xylose-proton symporter 41 46.59 0 47737..48000 - 87 194448125 rpsT SeHA_C0047 - ribosomal protein S20 42 56.87 0 48329..49267 + 312 194448015 ribF SeHA_C0048 - riboflavin biosynthesis protein RibF 43 54.65 0 49276..52146 + 956 194447430 ileS SeHA_C0049 - isoleucyl-tRNA synthetase 44 52.89 0 52146..52646 + 166 194449317 lspA SeHA_C0050 - signal peptidase II 45 56.06 0 52660..52791 + 43 194448653 - SeHA_C0051 - hypothetical protein 46 54.67 0 52801..53250 + 149 194450579 fkpB SeHA_C0052 - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase 47 57.62 0 53253..54203 + 316 194449983 ispH SeHA_C0053 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 48 48.05 0 54403..55605 + 400 194451956 - SeHA_C0054 - putative nitrite reductase 49 56.89 0 55621..56541 + 306 194451485 - SeHA_C0055 - Non-specific ribonucleoside hydrolase RihC 50 48.33 0 56563..57249 - 228 194448313 - SeHA_C0056 - transcriptional regulatory protein CitB 51 47.38 0 57251..58909 - 552 194448113 - SeHA_C0057 - sensor kinase DpiB 52 64.44 +2 59005..60306 - 433 194448149 - SeHA_C0058 - oxaloacetate decarboxylase beta chain 53 63.74 +1 60319..62094 - 591 194450841 oadA SeHA_C0059 - oxaloacetate decarboxylase alpha subunit 54 56.25 0 62111..62350 - 79 194447598 - SeHA_C0060 - hypothetical protein 55 49.29 0 62509..63849 - 446 194447501 - SeHA_C0061 - citrate-sodium symporter 56 53.68 0 64106..65137 + 343 194448979 citC SeHA_C0062 - [citrate (pro-3S)-lyase] ligase 57 56.46 0 65167..65460 + 97 194449626 citD SeHA_C0063 - citrate lyase acyl carrier protein 58 55.40 0 65457..66326 + 289 194449708 citE SeHA_C0064 - citrate (pro-3S)-lyase, beta subunit 59 54.96 0 66337..67857 + 506 194449842 citF SeHA_C0065 - citrate lyase, alpha subunit 60 55.43 0 67857..68408 + 183 194451784 citX SeHA_C0066 - holo-ACP synthase CitX 61 54.90 0 68386..69294 + 302 194448820 citG SeHA_C0067 - triphosphoribosyl-dephospho-CoA synthase CitG 62 57.06 0 69474..70295 + 273 194450677 dapB SeHA_C0068 - dihydrodipicolinate reductase 63 25.17 -2 70771..70917 - 48 194447730 - SeHA_C0069 - hypothetical protein 64 56.12 0 71131..72306 + 391 194448560 carA SeHA_C0070 - carbamoyl-phosphate synthase, small subunit 65 59.14 +1 72325..75552 + 1075 194447884 carB SeHA_C0071 - carbamoyl-phosphate synthase, large subunit 66 55.95 0 76299..76895 - 198 194451785 - SeHA_C0073 - carnitine operon protein CaiE 67 56.87 0 76993..77778 - 261 194451153 - SeHA_C0074 - carnitinyl-CoA dehydratase 68 50.90 0 77832..79385 - 517 194450926 - SeHA_C0075 - probable crotonobetaine/carnitine-CoA ligase 69 53.22 0 79448..80719 - 423 194450506 - SeHA_C0076 - crotonobetainyl-CoA:carnitine CoA-transferase 70 52.58 0 80777..81919 - 380 194450855 caiA SeHA_C0077 - crotonobetainyl-CoA dehydrogenase 71 53.89 0 81954..83471 - 505 194451766 caiT SeHA_C0078 - L-carnitine/gamma-butyrobetaine antiporter 72 27.35 -2 83613..83729 + 38 194447638 - SeHA_C0079 - hypothetical protein 73 28.49 -2 83699..83884 + 61 194448402 - SeHA_C0080 - hypothetical protein 74 52.01 0 83952..84722 + 256 194448940 fixA SeHA_C0081 - protein FixA 75 59.24 +1 84738..85679 + 313 194449733 fixB SeHA_C0082 - electron transfer flavoprotein, alpha subunit 76 55.48 0 85729..87015 + 428 194450228 fixC SeHA_C0083 - protein FixC 77 54.86 0 87012..87299 + 95 194449738 - SeHA_C0084 - 4Fe-4S ferredoxin, iron-sulfur binding domain protein 78 53.66 0 87380..88786 + 468 194448099 - SeHA_C0085 - putative metabolite transport protein YaaU 79 48.48 0 88875..89105 + 76 194448644 - SeHA_C0086 - hypothetical protein 80 47.24 0 89385..89801 + 138 194449201 - SeHA_C0087 - probable secreted protein 81 46.39 0 90025..90315 - 96 194450342 - SeHA_C0088 - probable secreted protein 82 46.67 0 91213..93102 + 629 194451018 - SeHA_C0089 - sulfatase 83 53.67 0 93656..94186 + 176 194451654 kefF SeHA_C0090 - glutathione-regulated potassium-efflux system ancillary protein kefF 84 57.97 +1 94179..96041 + 620 194447596 - SeHA_C0091 - glutathione-regulated potassium-efflux system protein KefC 85 40.48 -1 96038..96163 - 41 194448197 - SeHA_C0092 - hypothetical protein 86 53.75 0 96239..96718 + 159 194448300 folA SeHA_C0093 - dihydrofolate reductase 87 56.30 0 96824..97672 - 282 194448994 - SeHA_C0094 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 88 55.03 0 97683..98060 - 125 194449620 apaG SeHA_C0095 - protein ApaG 89 52.55 0 98063..98884 - 273 194450226 ksgA SeHA_C0096 - dimethyladenosine transferase 90 58.59 +1 98881..99870 - 329 194450790 pdxA SeHA_C0097 - 4-hydroxythreonine-4-phosphate dehydrogenase 91 54.39 0 99870..101156 - 428 194451624 surA SeHA_C0098 - chaperone/peptidyl-prolyl cis-trans isomerase SurA 92 52.77 0 101210..103570 - 786 194450910 imp SeHA_C0099 - LPS-assembly protein 93 47.53 0 103580..103741 - 53 194451630 - SeHA_C0100 - hypothetical protein 94 54.12 0 103824..104636 + 270 194450976 - SeHA_C0101 - DnaJ domain protein 95 57.12 0 104731..105390 - 219 194448284 - SeHA_C0102 - pseudouridine synthase, RluA family 96 57.14 0 105402..108236 - 944 194447648 rapA SeHA_C0103 - RNA polymerase associated protein RapA 97 56.51 0 108482..110833 - 783 194449638 - SeHA_C0104 - DNA polymerase II 98 47.07 0 110877..111626 - 249 194448844 - SeHA_C0105 - putative secreted protein 99 42.62 -1 112015..112434 + 139 194450762 - SeHA_C0106 - putative cytoplasmic protein 100 55.03 0 112440..113135 - 231 194449950 araD SeHA_C0107 - L-ribulose-5-phosphate 4-epimerase 51.70 MEAN 6.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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