IslandPath Analysis: Anaeromyxobacter dehalogenans 2CP-C



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.55   STD DEV: 4.53
Anaeromyxobacter dehalogenans 2CP-C, complete genome - 1..5013479
4346 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 70.38	0	22..1395	+	457	86156431	-	Adeh_0001	-	chromosomal replication initiator protein DnaA
2	 68.17	-1	1811..2938	+	375	86156432	-	Adeh_0002	-	DNA polymerase III, beta subunit
3	 76.23	0	2958..4076	+	372	86156433	-	Adeh_0003	-	DNA replication and repair protein RecF
4	 69.35	-1	4264..6651	+	795	86156434	-	Adeh_0004	-	DNA gyrase subunit B
5	 70.98	0	6733..7728	+	331	86156435	-	Adeh_0005	-	3-oxoacyl-[acyl-carrier-protein] synthase III
6	 76.44	0	7938..8459	+	173	86156436	-	Adeh_0006	-	Zn-dependent protease
7	 77.48	0	8483..9259	+	258	86156437	-	Adeh_0007	-	hypothetical protein
8	 72.89	0	9256..11391	-	711	86156438	-	Adeh_0008	-	hypothetical protein
9	 79.42	+1	11509..12621	-	370	86156439	-	Adeh_0009	-	hypothetical protein
10	 76.08	0	12881..13549	-	222	86156440	-	Adeh_0010	-	DsbA oxidoreductase
11	 73.58	0	13670..14653	-	327	86156441	-	Adeh_0011	-	SSU ribosomal protein S6P modification protein
12	 71.45	0	14776..17616	+	946	86156442	-	Adeh_0012	-	isoleucyl-tRNA synthetase
13	 71.01	0	17616..18236	+	206	86156443	-	Adeh_0013	-	signal peptidase II
14	 74.61	0	18249..19154	+	301	86156444	-	Adeh_0014	-	prolipoprotein diacylglyceryl transferase
15	 74.79	0	19187..19912	+	241	86156445	-	Adeh_0015	-	hypothetical protein
16	 78.23	0	20149..20520	+	123	86156446	-	Adeh_0016	-	hypothetical protein
17	 77.03	0	20834..21325	-	163	86156447	-	Adeh_0017	-	response regulator receiver domain-containing protein
18	 75.79	0	21603..21920	+	105	86156448	-	Adeh_0018	-	hypothetical protein
19	 68.30	-1	21965..22762	-	265	86156449	-	Adeh_0019	-	hypothetical protein
20	 71.00	0	22777..24162	-	461	86156450	-	Adeh_0020	-	hypothetical protein
21	 75.46	0	24512..25921	+	469	86156451	-	Adeh_0021	-	periplasmic sensor signal transduction histidine kinase
22	 70.77	0	25906..26295	-	129	86156452	-	Adeh_0022	-	glyoxalase/bleomycin resistance protein/dioxygenase
23	 78.26	0	26331..27236	+	301	86156453	-	Adeh_0023	-	XRE family transcriptional regulator
24	 70.52	0	27294..28826	+	510	86156454	-	Adeh_0024	-	prolyl-tRNA synthetase
25	 73.18	0	28777..29313	-	178	86156455	-	Adeh_0025	-	hypothetical protein
26	 74.54	0	29510..30589	+	359	86156456	-	Adeh_0026	-	hypothetical protein
27	 78.48	0	30623..31612	-	329	86156457	-	Adeh_0027	-	NAD-dependent epimerase/dehydratase
28	 79.30	+1	31692..32633	+	313	86156458	-	Adeh_0028	-	LysR family transcriptional regulator
29	 74.97	0	32805..35033	+	742	86156459	-	Adeh_0029	-	fibronectin, type III
30	 78.07	0	35104..37059	-	651	86156460	-	Adeh_0030	-	methyl-accepting chemotaxis sensory transducer
31	 76.44	0	37329..38351	+	340	86156461	-	Adeh_0031	-	short-chain dehydrogenase/reductase SDR
32	 70.10	0	38433..39656	-	407	86156462	-	Adeh_0032	-	membrane protein
33	 73.86	0	39670..42618	-	982	86156463	-	Adeh_0033	-	hypothetical protein
34	 73.10	0	42897..44528	+	543	86156464	-	Adeh_0034	-	Na+/solute symporter
35	 77.00	0	44718..45995	+	425	86156465	-	Adeh_0035	-	hypothetical protein
36	 73.98	0	46127..47452	-	441	86156466	-	Adeh_0036	-	phenylacetate-CoA ligase
37	 72.75	0	47456..47899	-	147	86156467	-	Adeh_0037	-	ACT domain-containing protein
38	 71.72	0	47919..49244	-	441	86156468	-	Adeh_0038	-	phenylacetate-CoA ligase
39	 75.26	0	49257..49745	-	162	86156469	-	Adeh_0039	-	pyruvate ferredoxin/flavodoxin oxidoreductase
40	 74.22	0	49738..51378	-	546	86156470	-	Adeh_0040	-	indolepyruvate ferredoxin oxidoreductase, alpha subunit
41	 77.49	0	51504..52427	+	307	86156471	-	Adeh_0041	-	phosphate butyryltransferase
42	 80.22	+1	52424..53530	+	368	86156472	-	Adeh_0042	-	butyrate kinase
43	 81.41	+1	53503..54981	-	492	86156473	-	Adeh_0043	-	GntR family transcriptional regulator
44	 78.93	0	55047..56114	+	355	86156474	-	Adeh_0044	-	GCN5-related N-acetyltransferase
45	 78.05	0	56166..56780	-	204	86156475	-	Adeh_0045	-	hypothetical protein
46	 77.09	0	56823..58817	-	664	86156476	-	Adeh_0046	-	hypothetical protein
47	 70.88	0	58893..59390	-	165	86156477	-	Adeh_0047	-	hypothetical protein
48	 70.02	0	59616..60419	+	267	86156478	-	Adeh_0048	-	electron transfer flavoprotein subunit beta
49	 76.40	0	60465..61430	+	321	86156479	-	Adeh_0049	-	electron transfer flavoprotein alpha and beta subunits
50	 75.52	0	61456..62460	+	334	86156480	-	Adeh_0050	-	Beta-lactamase-like
51	 68.77	-1	62515..63276	+	253	86156481	-	Adeh_0051	-	integral membrane protein TerC
52	 75.52	0	63293..64207	+	304	86156482	-	Adeh_0052	-	hypothetical protein
53	 76.83	0	64275..65474	+	399	86156483	-	Adeh_0053	-	membrane-bound lytic murein transglycosylase
54	 70.21	0	65530..66828	-	432	86156484	-	Adeh_0054	-	uracil-xanthine permease
55	 74.52	0	67288..68280	+	330	86156485	-	Adeh_0055	-	putative mRNA 3'-end processing factor
56	 74.22	0	68315..69334	+	339	86156486	-	Adeh_0056	-	ribosomal large subunit pseudouridine synthase C
57	 72.41	0	69371..71929	+	852	86156487	-	Adeh_0057	-	penicillin-binding protein 1A
58	 70.97	0	72094..74160	+	688	86156488	-	Adeh_0058	-	methyl-accepting chemotaxis sensory transducer
59	 74.41	0	74302..74766	-	154	86156489	-	Adeh_0059	-	hypothetical protein
60	 76.64	0	74838..75278	+	146	86156490	-	Adeh_0060	-	sec-independent translocation protein mttA/Hcf106
61	 68.63	-1	75285..76097	+	270	86156491	-	Adeh_0061	-	Sec-independent protein translocase TatC
62	 75.94	0	76392..77588	+	398	86156492	-	Adeh_0062	-	acetyl-CoA acetyltransferase
63	 65.15	-2	77662..77859	+	65	86156493	-	Adeh_0063	-	hypothetical protein
64	 73.41	0	77866..78606	+	246	86156494	-	Adeh_0064	-	rhomboid-like protein
65	 79.15	+1	78632..81706	-	1024	86156495	-	Adeh_0065	-	hypothetical protein
66	 73.19	0	81834..83780	+	648	86156496	-	Adeh_0066	-	radical SAM family protein
67	 73.69	0	83841..84452	+	203	86156497	-	Adeh_0067	-	hypothetical protein
68	 81.05	+1	84535..85278	+	247	86156498	-	Adeh_0068	-	lipolytic protein
69	 74.02	0	85312..86685	+	457	86156499	-	Adeh_0069	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
70	 78.12	0	86685..87356	+	223	86156500	-	Adeh_0070	-	dethiobiotin synthase
71	 77.66	0	87409..87681	+	90	86156501	-	Adeh_0071	-	hypothetical protein
72	 67.40	-1	87888..88160	-	90	86156502	-	Adeh_0072	-	hypothetical protein
73	 76.28	0	88180..89604	-	474	86156503	-	Adeh_0073	-	peptidase S1 and S6, chymotrypsin/Hap
74	 66.67	-1	89573..89812	-	79	86156504	-	Adeh_0074	-	hypothetical protein
75	 80.12	+1	89895..90563	+	222	86156505	-	Adeh_0075	-	thiamine-phosphate pyrophosphorylase
76	 77.92	0	90560..91270	+	236	86156506	-	Adeh_0076	-	peptidase C26
77	 81.99	+1	91267..92010	+	247	86156507	-	Adeh_0077	-	phosphomethylpyrimidine kinase
78	 75.53	0	92462..93172	+	236	86156508	-	Adeh_0078	-	hypothetical protein
79	 70.32	0	93195..94616	-	473	86156509	-	Adeh_0079	-	primary replicative DNA helicase
80	 74.21	0	94780..95667	+	295	86156510	-	Adeh_0080	-	hypothetical protein
81	 78.81	0	99116..99790	-	224	86156511	-	Adeh_0082	-	LrgB-like protein
82	 79.08	0	99787..100197	-	136	86156512	-	Adeh_0083	-	LrgA
83	 79.06	0	100280..101215	+	311	86156513	-	Adeh_0084	-	LysR family transcriptional regulator
84	 72.63	0	101176..104628	-	1150	86156514	-	Adeh_0085	-	methionine synthase (B12-dependent)
85	 72.64	0	104804..105874	+	356	86156515	-	Adeh_0086	-	radical SAM family protein
86	 73.33	0	105914..106273	-	119	86156516	-	Adeh_0087	-	hypothetical protein
87	 74.38	0	106372..107058	+	228	86156517	-	Adeh_0088	-	outer membrane lipoprotein carrier protein LolA
88	 75.54	0	107075..108550	+	491	86156518	-	Adeh_0089	-	protein of unknown function DUF853, NPT hydrolase putative
89	 78.01	0	108646..110064	+	472	86156519	-	Adeh_0090	-	periplasmic sensor signal transduction histidine kinase
90	 76.81	0	110074..110931	+	285	86156520	-	Adeh_0091	-	hypothetical protein
91	 74.15	0	111181..111621	+	146	86156521	-	Adeh_0092	-	hemerythrin-like, metal-binding protein
92	 73.42	0	111634..113085	-	483	86156522	-	Adeh_0093	-	hypothetical protein
93	 69.12	-1	113130..113618	-	162	86156523	-	Adeh_0094	-	nucleotide-binding protein
94	 76.16	0	113662..115314	-	550	86156524	-	Adeh_0095	-	Beta-lactamase-like protein
95	 82.00	+1	115411..116538	+	375	86156525	-	Adeh_0096	-	hypothetical protein
96	 76.27	0	116697..119090	+	797	86156526	-	Adeh_0097	-	ATP-dependent DNA helicase Rep
97	 71.79	0	119187..120317	+	376	86156527	-	Adeh_0098	-	adenosine deaminase
98	 79.42	+1	120314..120799	+	161	86156528	-	Adeh_0099	-	methylated-DNA--protein-cysteine methyltransferase
99	 66.67	-1	120947..122188	+	413	86156529	-	Adeh_0100	-	glucose-1-phosphate adenylyltransferase
100	 73.13	0	122288..122674	-	128	86156530	-	Adeh_0101	-	response regulator receiver domain-containing protein
74.55	MEAN

4.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.