IslandPath Analysis: Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 23.50   STD DEV: 4.18
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis, complete genome - 1..697724
611 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 26.02	0	182..2068	+	628	32490750	-	WGLp001	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
2	 22.82	0	2230..3066	+	278	32490751	-	WGLp002	-	F0F1 ATP synthase subunit A
3	 34.58	+2	3076..3315	+	79	32490752	atpE	WGLp003	-	F0F1 ATP synthase subunit C
4	 23.05	0	3328..3813	+	161	32490753	atpF	WGLp004	-	hypothetical protein
5	 15.63	-1	3817..4347	+	176	32490754	atpH	WGLp005	-	hypothetical protein
6	 28.25	+1	4368..5900	+	510	32490755	atpA	WGLp006	-	F0F1 ATP synthase subunit alpha
7	 21.41	0	5954..6817	+	287	32490756	atpG	WGLp007	-	hypothetical protein
8	 29.37	+1	6842..8230	+	462	32490757	atpD	WGLp008	-	F0F1 ATP synthase subunit beta
9	 25.18	0	8242..8658	+	138	32490758	atpC	WGLp009	-	hypothetical protein
10	 23.38	0	8848..10233	+	461	32490759	glmU	WGLp010	-	hypothetical protein
11	 25.07	0	10399..12237	+	612	32490760	glmS	WGLp011	-	hypothetical protein
12	 23.57	0	12243..13604	-	453	32490761	trmE	WGLp012	-	tRNA modification GTPase TrmE
13	 22.74	0	13661..15283	-	540	32490762	yidC	WGLp013	-	hypothetical protein
14	 27.78	+1	15893..16036	-	47	32490763	rpmH	WGLp014	-	hypothetical protein
15	 20.09	0	16358..17467	+	369	32490764	dnaN	WGLp015	-	hypothetical protein
16	 25.95	0	17566..19977	+	803	32490765	gyrB	WGLp016	-	hypothetical protein
17	 14.18	-2	20102..22273	+	723	32490766	imp	WGLp017	-	hypothetical protein
18	 14.05	-2	22260..23618	+	452	32490767	surA	WGLp018	-	hypothetical protein
19	 27.13	0	23625..24623	+	332	32490768	pdxA	WGLp019	-	hypothetical protein
20	 20.74	0	24633..25418	+	261	32490769	ksgA	WGLp020	-	hypothetical protein
21	 22.59	0	25461..26279	+	272	32490770	apaH	WGLp021	-	diadenosine tetraphosphatase
22	 21.47	0	26330..26818	-	162	32490771	folA	WGLp022	-	hypothetical protein
23	 23.84	0	26828..30082	-	1084	32490772	carB	WGLp023	-	hypothetical protein
24	 24.05	0	30092..31222	-	376	32490773	carA	WGLp024	-	carbamoyl phosphate synthase small subunit
25	 21.80	0	31233..32030	-	265	32490774	dapB	WGLp025	-	hypothetical protein
26	 16.62	-1	32290..33360	+	356	32490775	yb1688	WGLp026	-	hypothetical protein
27	 32.01	+2	34105..34482	+	125	32490776	rpsL	WGLp027	-	30S ribosomal protein S12
28	 31.63	+1	34525..34995	+	156	32490777	rpsG	WGLp028	-	30S ribosomal protein S7
29	 30.17	+1	35041..37158	+	705	32490778	fusA	WGLp029	-	hypothetical protein
30	 25.22	0	37981..38325	+	114	32490779	flhD	WGLp030	-	transcriptional activator FlhD
31	 30.81	+1	38330..38884	+	184	32490780	flhC	WGLp031	-	transcriptional activator FlhC
32	 31.65	+1	38997..39887	+	296	32490781	motA	WGLp032	-	flagellar motor protein MotA
33	 30.48	+1	39892..40872	+	326	32490782	motB	WGLp033	-	flagellar motor protein MotB
34	 22.11	0	40924..42081	+	385	32490783	flhB	WGLp034	-	hypothetical protein
35	 27.02	0	42014..44200	+	728	32490784	flhA	WGLp035	-	hypothetical protein
36	 18.42	-1	44197..44652	-	151	32490785	flgN	WGLp036	-	hypothetical protein
37	 21.53	0	44781..45458	-	225	32490786	flgA	WGLp037	-	hypothetical protein
38	 23.60	0	45617..46027	+	136	32490787	flgB	WGLp038	-	hypothetical protein
39	 28.11	+1	46031..46432	+	133	32490788	flgC	WGLp039	-	hypothetical protein
40	 20.83	0	46485..47324	+	279	32490789	flgD	WGLp040	-	hypothetical protein
41	 29.28	+1	47376..48608	+	410	32490790	flgE	WGLp041	-	hypothetical protein
42	 27.67	0	48619..49359	+	246	32490791	flgF	WGLp042	-	hypothetical protein
43	 31.29	+1	49376..50158	+	260	32490792	flgG	WGLp043	-	flagellar basal body rod protein FlgG
44	 26.78	0	50205..50891	+	228	32490793	flgH	WGLp044	-	flagellar basal body L-ring protein
45	 29.74	+1	50901..52013	+	370	32490794	flgI	WGLp045	-	flagellar basal body P-ring protein
46	 21.18	0	52406..54043	+	545	32490795	flgK	WGLp046	-	hypothetical protein
47	 21.97	0	54078..55019	+	313	32490796	flgL	WGLp047	-	hypothetical protein
48	 21.49	0	55039..55815	-	258	32490797	fliR	WGLp048	-	hypothetical protein
49	 26.37	0	55812..56084	-	90	32490798	fliQ	WGLp049	-	hypothetical protein
50	 24.24	0	56094..56885	-	263	32490799	fliP	WGLp050	-	flagellar biosynthesis protein FliP
51	 14.55	-2	56895..57224	-	109	32490800	fliO	WGLp051	-	hypothetical protein
52	 25.74	0	57221..57628	-	135	32490801	fliN	WGLp052	-	hypothetical protein
53	 17.29	-1	57633..58592	-	319	32490802	fliM	WGLp053	-	hypothetical protein
54	 25.36	0	58599..59087	-	162	32490803	fliL	WGLp054	-	hypothetical protein
55	 13.83	-2	59149..60384	-	411	32490804	fliK	WGLp055	-	hypothetical protein
56	 16.34	-1	60381..60833	-	150	32490805	fliJ	WGLp056	-	hypothetical protein
57	 30.07	+1	60838..62214	-	458	32490806	fliI	WGLp057	-	hypothetical protein
58	 24.11	0	62211..62882	-	223	32490807	fliH	WGLp058	-	hypothetical protein
59	 24.85	0	62863..63876	-	337	32490808	fliG	WGLp059	-	hypothetical protein
60	 25.50	0	63846..65555	-	569	32490809	fliF	WGLp060	-	hypothetical protein
61	 19.39	0	65797..66126	+	109	32490810	fliE	WGLp061	-	hypothetical protein
62	 18.83	-1	66160..66552	-	130	32490811	fliS	WGLp062	-	hypothetical protein
63	 20.75	0	66578..68095	-	505	32490812	fliD	WGLp063	-	hypothetical protein
64	 31.28	+1	68298..69563	+	421	32490813	fliC	WGLp064	-	hypothetical protein
65	 18.99	-1	69626..70573	-	315	32490814	yceA	WGLp065	-	hypothetical protein
66	 23.62	0	70638..73118	-	826	32490815	mdoH	WGLp066	-	glucosyltransferase MdoH
67	 26.59	0	73379..74134	-	251	32490816	gloB	WGLp067	-	hypothetical protein
68	 22.57	0	74186..74659	-	157	32490817	rnhA	WGLp068	-	hypothetical protein
69	 22.40	0	74707..75447	+	246	32490818	dnaQ	WGLp069	-	hypothetical protein
70	 19.07	-1	75536..76117	-	193	32490819	yhhF	WGLp070	-	hypothetical protein
71	 22.02	0	76243..77223	+	326	32490820	ftsY	WGLp071	-	hypothetical protein
72	 28.25	+1	77376..78221	+	281	32490821	rpoH	WGLp072	-	RNA polymerase factor sigma-32
73	 24.85	0	78231..79538	-	435	32490822	hemL	WGLp073	-	hypothetical protein
74	 22.61	0	79688..80032	+	114	32490823	yadR	WGLp074	-	hypothetical protein
75	 22.19	0	80078..81145	-	355	32490824	mltC	WGLp075	-	hypothetical protein
76	 17.72	-1	81230..81466	-	78	32490825	yggX	WGLp076	-	hypothetical protein
77	 18.01	-1	82454..83269	-	271	32490826	yggW	WGLp077	-	hypothetical protein
78	 22.50	0	83256..83855	-	199	32490827	yggV	WGLp078	-	hypothetical protein
79	 24.77	0	83947..84822	-	291	32490828	proC	WGLp079	-	hypothetical protein
80	 18.52	-1	84806..85507	-	233	32490829	yggS	WGLp080	-	hypothetical protein
81	 22.82	0	85827..87737	+	636	32490830	thrS	WGLp081	-	hypothetical protein
82	 23.86	0	87700..88290	+	196	32490831	infC	WGLp082	-	hypothetical protein
83	 21.89	0	88380..88580	+	66	32490832	rpmI	WGLp083	-	hypothetical protein
84	 25.99	0	88625..88978	+	117	32490833	rplT	WGLp084	-	50S ribosomal protein L20
85	 22.95	0	89116..90117	+	333	32490834	pheS	WGLp085	-	hypothetical protein
86	 19.94	0	90128..92539	+	803	32490835	pheT	WGLp086	-	hypothetical protein
87	 22.10	0	92559..93608	-	349	32490836	pyrC	WGLp087	-	dihydroorotase
88	 21.77	0	93717..96068	-	783	32490837	rne	WGLp088	-	hypothetical protein
89	 26.67	0	97518..97697	+	59	32490838	rpmF	WGLp089	-	hypothetical protein
90	 24.66	0	97697..98641	+	314	32490839	fabD	WGLp090	-	hypothetical protein
91	 25.17	0	98638..99372	+	244	32490840	fabG	WGLp091	-	hypothetical protein
92	 33.76	+2	99504..99740	+	78	32490841	acpP	WGLp092	-	hypothetical protein
93	 21.78	0	99853..100899	+	348	32490842	yceG	WGLp093	-	hypothetical protein
94	 26.81	0	100886..101590	+	234	32490843	tmk	WGLp094	-	hypothetical protein
95	 19.09	-1	101594..102583	+	329	32490844	holB	WGLp095	-	hypothetical protein
96	 20.25	0	102583..103377	+	264	32490845	ycfH	WGLp096	-	hypothetical protein
97	 25.73	0	103420..103761	+	113	32490846	ycfF	WGLp097	-	hypothetical protein
98	 23.47	0	103858..105165	+	435	32490847	ndh	WGLp098	-	hypothetical protein
99	 22.35	0	105179..107236	-	685	32490848	mfd	WGLp099	-	hypothetical protein
100	 18.66	-1	107487..108692	+	401	32490849	ycfU	WGLp100	-	hypothetical protein
23.50	MEAN

4.18	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.