version 1.0
Prochlorococcus marinus str. MIT 9515, complete genome - 1..1704176 1906 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 30.05 0 171..1328 + 385 123965235 dnaN P9515_00001 - DNA polymerase III subunit beta 2 28.53 0 1330..2037 + 235 123965236 - P9515_00011 - hypothetical protein 3 32.35 0 2041..4380 + 779 123965237 - P9515_00021 - phosphoribosylformylglycinamidine synthase II 4 31.96 0 4428..5888 + 486 123965238 purF P9515_00031 - amidophosphoribosyltransferase 5 26.41 -1 5892..8333 - 813 123965239 - P9515_00041 - DNA gyrase/topoisomerase IV, subunit A 6 25.85 -1 8421..9275 - 284 123965240 - P9515_00051 - TPR-repeat pilus assembly protein TadD 7 30.79 0 9280..10224 - 314 123965241 - P9515_00061 - hypothetical protein 8 32.79 0 10373..11110 + 245 123965242 - P9515_00071 - hypothetical protein 9 30.14 0 11114..11740 + 208 123965243 nusB P9515_00081 - transcription antitermination protein NusB 10 33.81 0 11800..13047 + 415 123965244 ftsY P9515_00091 - signal recognition particle docking protein FtsY 11 28.62 0 13190..14461 + 423 123965245 rsbU P9515_00101 - protein phosphatase 2C domain-containing protein 12 30.94 0 14522..15901 + 459 123965246 argH P9515_00111 - argininosuccinate lyase 13 51.42 +2 16018..16686 + 222 123965247 - P9515_00121 - RNA recognition motif-containing protein 14 32.04 0 16683..17687 - 334 123965248 - P9515_00131 - tRNA-dihydrouridine synthase A 15 35.35 0 17715..18209 + 164 123965249 - P9515_00141 - hypothetical protein 16 31.94 0 18286..19005 + 239 123965250 grpE P9515_00151 - heat shock protein GrpE 17 37.96 +1 19037..20161 + 374 123965251 dnaJ P9515_00161 - DnaJ protein 18 27.78 0 20158..20391 + 77 123965252 - P9515_00171 - hypothetical protein 19 26.80 0 20381..21298 + 305 123965253 - P9515_00181 - GTPase 20 34.19 0 21264..21614 - 116 123965254 - P9515_00191 - hypothetical protein 21 30.08 0 21636..22526 - 296 123965255 murB P9515_00201 - UDP-N-acetylenolpyruvoylglucosamine reductase 22 25.74 -1 22542..23951 - 469 123965256 murC P9515_00211 - UDP-N-acetylmuramate-alanine ligase 23 37.34 +1 24149..25171 + 340 123965257 gap2 P9515_00221 - glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) 24 30.29 0 25172..26158 - 328 123965258 thiL P9515_00231 - putative thiamine-monophosphate kinase 25 33.33 0 26151..27242 - 363 123965259 - P9515_00241 - cyclophilin-type peptidyl-prolyl cis-trans isomerase 26 36.90 +1 27286..27846 + 186 123965260 efp P9515_00251 - elongation factor P 27 36.88 +1 27846..28352 + 168 123965261 accB P9515_00261 - biotin / lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit 28 32.66 0 28329..29369 - 346 123965262 pdxA P9515_00271 - 4-hydroxythreonine-4-phosphate dehydrogenase 29 30.05 0 29462..30343 - 293 123965263 - P9515_00281 - nucleoside-diphosphate-sugar epimerase 30 27.64 0 30372..30617 + 81 123965264 - P9515_00291 - transcription factor TFIID (or TATA-b 31 34.08 0 30618..31019 - 133 123965265 - P9515_00301 - HNH endonuclease:HNH nuclease 32 34.05 0 31190..31609 - 139 123965266 - P9515_00311 - type II secretion system protein-like protein 33 37.04 +1 31667..32179 - 170 123965267 - P9515_00321 - hypothetical protein 34 33.84 0 32452..32649 + 65 123965268 - P9515_00331 - hypothetical protein 35 34.02 0 32651..33814 - 387 123965269 dhsS P9515_00341 - soluble hydrogenase small subunit 36 31.55 0 33875..34993 + 372 123965270 cbiD P9515_00351 - cobalt-precorrin-6A synthase 37 34.03 0 35042..36628 + 528 123965271 guaA P9515_00361 - bifunctional GMP synthase/glutamine amidotransferase protein 38 30.40 0 36830..39763 - 977 123965272 - P9515_00371 - hypothetical protein 39 33.17 0 39856..40464 + 202 123965273 - P9515_00381 - hypothetical protein 40 26.42 -1 40817..41134 - 105 123965274 - P9515_00391 - hypothetical protein 41 33.12 0 41351..41818 + 155 123965275 - P9515_00401 - hypothetical protein 42 35.15 0 42380..44248 - 622 123965276 - P9515_00411 - hypothetical protein 43 29.51 0 45009..45191 + 60 123965277 - P9515_00421 - hypothetical protein 44 30.48 0 45328..45432 - 34 123965278 - P9515_00431 - hypothetical protein 45 28.73 0 46152..46868 + 238 123965279 - P9515_00441 - hypothetical protein 46 32.18 0 46955..47563 + 202 123965280 - P9515_00451 - hypothetical protein 47 22.01 -2 47676..47834 + 52 123965281 - P9515_00461 - hypothetical protein 48 33.52 0 47983..49629 + 548 123965282 - P9515_00471 - putative penicillin-binding protein 49 30.29 0 49663..50187 - 174 123965283 - P9515_00481 - putative reductase 50 32.50 0 50206..52008 - 600 123965284 - P9515_00491 - flavoprotein 51 34.97 0 52026..53801 - 591 123965285 - P9515_00501 - flavoprotein 52 32.81 0 53916..56576 + 886 123965286 alaS P9515_00511 - alanyl-tRNA synthetase 53 29.17 0 56561..58507 - 648 123965287 speA P9515_00521 - arginine decarboxylase 54 35.73 0 58628..59086 + 152 123965288 ndk P9515_00531 - nucleoside diphosphate kinase 55 32.79 0 59099..60202 - 367 123965289 dadA P9515_00541 - putative thiamine biosynthesis oxidoreductase 56 33.40 0 60285..61757 + 490 123965290 gatB P9515_00551 - aspartyl/glutamyl-tRNA amidotransferase subunit B 57 26.83 0 61761..62375 - 204 123965291 coaE P9515_00561 - putative dephospho-CoA kinase 58 32.45 0 62442..63689 + 415 123965292 argJ P9515_00571 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 59 40.33 +2 63858..64529 - 223 123965293 - P9515_00581 - ATPases involved in chromosome partitioning 60 29.28 0 64683..65645 + 320 123965294 tas P9515_00591 - aldo/keto reductase 61 23.40 -1 65665..65805 - 46 123965295 - P9515_00601 - hypothetical protein 62 31.91 0 66282..67406 + 374 123965296 - P9515_00611 - RNA methylase family protein 63 31.52 0 67408..67794 - 128 123965297 - P9515_00621 - hypothetical protein 64 33.98 0 67795..68256 - 153 123965298 - P9515_00631 - hypothetical protein 65 40.58 +2 68447..68584 + 45 123965299 - P9515_00641 - hypothetical protein 66 27.82 0 68672..69034 + 120 123965300 - P9515_00651 - hypothetical protein 67 30.91 0 69117..72701 + 1194 123965301 smc P9515_00661 - SMC ATPase superfamily chromosome segregation protein 68 35.88 +1 72747..73766 + 339 123965302 - P9515_00671 - hypothetical protein 69 28.25 0 73778..75055 - 425 123965303 - P9515_00681 - lipid A disaccharide synthetase-like protein 70 36.67 +1 75462..76811 + 449 123965304 accC P9515_00691 - acetyl-CoA carboxylase biotin carboxylase subunit 71 34.48 0 76830..77003 - 57 123965305 - P9515_00701 - hypothetical protein 72 39.15 +1 77225..77413 + 62 123965306 - P9515_00711 - photosystem II protein X PsbX 73 36.68 +1 77492..78418 + 308 123965307 - P9515_00721 - hypothetical protein 74 26.92 0 78419..78652 - 77 123965308 - P9515_00731 - high light inducible protein 75 32.32 0 78662..80644 - 660 123965309 - P9515_00741 - ABC transporter, ATP binding protein 76 29.51 0 80684..80971 - 95 123965310 - P9515_00751 - hypothetical protein 77 34.21 0 81019..81360 - 113 123965311 hit P9515_00761 - HIT (histidine triad) family protein 78 32.35 0 81376..81987 - 203 123965312 def P9515_00771 - peptide deformylase 79 26.70 -1 82068..83996 + 642 123965313 dap2 P9515_00781 - esterase/lipase/thioesterase family protein 80 31.69 0 83993..85270 - 425 123965314 - P9515_00791 - putative cysteine desulfurase or selenocysteine lyase 81 27.83 0 85270..86487 - 405 123965315 - P9515_00801 - ABC transporter, membrane component 82 33.08 0 86495..87277 - 260 123965316 sufC P9515_00811 - ABC transporter, ATP binding component 83 34.44 0 87297..88739 - 480 123965317 - P9515_00821 - cysteine desulfurase activator complex subunit SufB 84 30.03 0 88839..89201 + 120 123965318 - P9515_00831 - hypothetical protein 85 35.68 0 89467..90573 + 368 123965319 - P9515_00841 - hypothetical protein 86 31.58 0 90586..90756 + 56 123965320 - P9515_00851 - membrane protein 87 32.72 0 90790..92427 + 545 123965321 pgm P9515_00861 - phosphoglucomutase 88 31.62 0 92461..93747 + 428 123965322 mgs1 P9515_00871 - recombination factor protein RarA 89 29.83 0 93744..94400 - 218 123965323 - P9515_00881 - putative 4'-phosphopantetheinyl transferase family protein 90 29.27 0 94400..94867 + 155 123965324 - P9515_00891 - putative bacterioferritin comigratory (BCP) protein 91 32.75 0 94873..95553 - 226 123965325 - P9515_00901 - transcriptional regulator 92 31.40 0 95571..96296 - 241 123965326 cysH P9515_00911 - phosphoadenosine phosphosulfate reductase 93 30.22 0 96388..97575 + 395 123965327 - P9515_00921 - putative NADH dehydrogenase, transport associated 94 34.83 0 97632..99440 + 602 123965328 citT P9515_00931 - DASS family sodium/sulfate transporter 95 30.20 0 99450..100853 + 467 123965329 trkG P9515_00941 - Trk family sodium transporter 96 35.60 0 100872..101576 + 234 123965330 - P9515_00951 - VIC family potassium channel protein 97 34.62 0 101573..101884 - 103 123965331 - P9515_00961 - hypothetical protein 98 31.27 0 102002..102340 + 112 123965332 - P9515_00971 - hypothetical protein 99 31.17 0 102376..102606 + 76 123965333 - P9515_00981 - hypothetical protein 100 34.97 0 102574..102756 - 60 123965334 - P9515_00991 - hypothetical protein 31.24 MEAN 4.51 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0