version 1.0
Carboxydothermus hydrogenoformans Z-2901, complete genome - 1..2401520 2620 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 46.67 0 225..359 + 44 78043997 rpmH CHY_0001 - 50S ribosomal protein L34 2 32.76 -1 426..776 + 116 78045102 rnpA CHY_0002 - ribonuclease P protein component 3 39.47 0 769..996 + 75 78043459 - CHY_0003 - hypothetical protein 4 36.76 0 1004..1675 + 223 78043134 - CHY_0004 - sporulation associated-membrane protein 5 42.19 0 1662..2282 + 206 78045166 jag CHY_0005 - jag protein 6 40.55 0 2359..3744 + 461 78044593 trmE CHY_0006 - tRNA modification GTPase TrmE 7 43.99 0 3754..5649 + 631 78043339 gidA1 CHY_0007 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 41.10 0 5633..6340 + 235 78044839 gidB CHY_0008 - glucose-inhibited division protein B 9 44.05 0 6483..7247 + 254 78043660 soj CHY_0009 - sporulation initiation inhibitor protein soj 10 43.90 0 7237..8097 + 286 78043063 - CHY_0010 - stage 0 sporulation protein J 11 48.35 +1 8127..9278 + 383 78044965 - CHY_0011 - cysteine desulfurase family protein 12 47.97 +1 9471..10502 + 343 78043356 - CHY_0012 - hypothetical protein 13 47.87 +1 10537..11430 + 297 78044734 - CHY_0013 - LysR family transcriptional regulator 14 43.36 0 11478..12644 - 388 78042797 - CHY_0014 - hypothetical protein 15 46.45 0 12646..13392 - 248 78043590 - CHY_0015 - hypothetical protein 16 44.28 0 13393..14196 - 267 78043673 - CHY_0016 - hypothetical protein 17 38.99 0 14277..14771 + 164 78043587 - CHY_0017 - hypothetical protein 18 41.00 0 14773..15411 + 212 78042838 - CHY_0018 - phosphoribosyl transferase domain-containing protein 19 43.88 0 15458..15694 + 78 78044281 - CHY_0019 - hypothetical protein 20 40.10 0 15615..16205 - 196 78043277 - CHY_0020 - hypothetical protein 21 37.11 0 16298..17302 + 334 78044479 - CHY_0021 - hypothetical protein 22 36.05 0 17312..17863 + 183 78045219 - CHY_0022 - hypothetical protein 23 42.46 0 17854..19245 + 463 78043016 - CHY_0023 - putative aminopeptidase 1 24 47.00 +1 19380..19796 + 138 78045022 - CHY_0024 - hypothetical protein 25 42.40 0 19798..20679 - 293 78045025 - CHY_0025 - hypothetical protein 26 36.53 0 20666..21478 - 270 78042960 - CHY_0026 - putative DNA ligase, ATP-dependent 27 38.80 0 21494..22279 - 261 78043847 - CHY_0027 - KU domain-containing protein 28 21.30 -2 22346..22453 - 35 78044067 - CHY_0028 - hypothetical protein 29 45.13 0 22437..23648 + 403 78044623 - CHY_0029 - putative inner membrane protein 30 48.29 +1 23650..23883 + 77 78044446 - CHY_0030 - hypothetical protein 31 48.85 +1 23931..25019 - 362 78044617 ychF CHY_0031 - translation-associated GTPase 32 39.80 0 25089..25289 - 66 78043835 - CHY_0032 - hypothetical protein 33 43.04 0 25282..26136 - 284 78045203 - CHY_0033 - mechanosensitive ion channel family protein 34 48.36 +1 26291..28180 - 629 78043206 cooSV CHY_0034 - carbon-monoxide dehydrogenase, catalytic subunit 35 43.64 0 28352..28642 + 96 78042831 rpsF CHY_0035 - 30S ribosomal protein S6 36 48.15 +1 28661..29092 + 143 78044015 - CHY_0036 - single-strand binding protein 37 45.02 0 29111..29341 + 76 78043292 rpsR CHY_0037 - 30S ribosomal protein S18 38 42.42 0 29465..30454 + 329 78044007 - CHY_0038 - hypothetical protein 39 38.60 0 30426..30881 + 151 78043341 rplI CHY_0039 - ribosomal protein L9 40 47.45 +1 30884..32782 + 632 78043822 - CHY_0040 - putative ATP-dependent protease La 41 46.32 0 32795..34126 + 443 78043236 dnaB CHY_0041 - replicative DNA helicase 42 43.89 0 34295..34957 + 220 78044629 - CHY_0042 - hypothetical protein 43 48.20 +1 35012..36067 + 351 78044081 - CHY_0043 - putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit 44 48.12 +1 36081..36824 + 247 78043364 - CHY_0044 - putative keto/oxoacid ferredoxin oxidoreductase, beta subunit 45 49.29 +1 36827..37390 + 187 78043393 - CHY_0045 - putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit 46 53.16 +2 37406..37642 + 78 78044911 - CHY_0046 - putative keto/oxoacid ferredoxin oxidoreductase, delta subunit 47 45.81 0 37724..39238 - 504 78042679 - CHY_0047 - serine protease 48 38.16 0 39312..39518 + 68 78044185 - CHY_0048 - hypothetical protein 49 44.02 0 39554..40882 + 442 78045175 cad CHY_0049 - lysine decarboxylase 50 45.42 0 40882..41493 + 203 78044441 tmk CHY_0050 - thymidylate kinase 51 41.42 0 41486..42289 + 267 78043743 - CHY_0051 - putative DNA polymerase III, delta prime subunit 52 45.82 0 42345..43193 + 282 78042958 - CHY_0052 - putative tpl protein 53 44.54 0 43159..43524 + 121 78042983 - CHY_0053 - hypothetical protein 54 47.87 +1 43493..44242 + 249 78043617 - CHY_0054 - hypothetical protein 55 46.17 0 44242..45051 + 269 78043091 - CHY_0055 - hypothetical protein 56 46.92 +1 45171..46046 + 291 78043675 - CHY_0056 - putative osmotically inducible protein 57 44.56 0 46164..47276 + 370 78044578 - CHY_0057 - putative serine protease Do 58 43.33 0 47337..47816 + 159 78045158 - CHY_0058 - hypothetical protein 59 34.98 -1 48186..49094 - 302 78042746 - CHY_0059 - LysR family transcriptional regulator 60 40.54 0 49465..50865 + 466 78043316 - CHY_0060 - anion transporter family protein 61 39.36 0 50977..51822 + 281 78044230 - CHY_0061 - fumarate hydratase 62 40.90 0 51846..52400 + 184 78043076 - CHY_0062 - fumarate hydratase 63 41.11 0 52405..54114 + 569 78044723 frdA CHY_0063 - fumarate reductase, flavoprotein subunit 64 40.36 0 54115..55068 + 317 78044013 frdB1 CHY_0064 - fumarate reductase, iron-sulfur subunit 65 40.28 0 55194..56057 + 287 78043435 - CHY_0065 - putative succinate/fumarate oxidoreductase 66 39.94 0 56176..57432 + 418 78043041 - CHY_0066 - hypothetical protein 67 43.74 0 57665..58933 + 422 78044497 dsdA CHY_0067 - D-serine dehydratase 68 38.40 0 59035..60396 + 453 78044612 - CHY_0068 - sodium transporter family protein 69 34.22 -1 60721..61173 + 150 78044032 - CHY_0069 - nucleotidyltransferase domain-containing protein 70 29.89 -2 61166..61600 + 144 78043071 - CHY_0070 - hypothetical protein 71 43.09 0 61752..61874 + 40 78043490 - CHY_0071 - hypothetical protein 72 43.53 0 61861..62223 + 120 78042932 glnB CHY_0072 - nitrogen regulatory protein P-II 73 44.87 0 62220..63536 + 438 78044978 amt CHY_0073 - ammonium transporter 74 41.03 0 63684..64853 + 389 78043610 - CHY_0074 - EAL domain-containing protein 75 46.67 0 64901..66355 - 484 78043036 - CHY_0075 - amino acid carrier protein 76 42.83 0 66711..67805 + 364 78045094 - CHY_0076 - PfkB family kinase 77 45.25 0 67802..68716 + 304 78044666 - CHY_0077 - indigoidine systhesis protein,-like protein 78 36.99 0 68796..69260 + 154 78043315 - CHY_0078 - hypothetical protein 79 39.24 0 69282..70094 + 270 78042827 - CHY_0079 - amidohydrolase family protein 80 35.43 -1 70160..70588 + 142 78044920 - CHY_0080 - nucleotidyltransferase domain-containing protein 81 25.71 -2 70715..70819 + 34 78044342 - CHY_0081 - hypothetical protein 82 46.89 +1 70812..71261 + 149 78042741 - CHY_0082 - universal stress family protein 83 41.09 0 71306..71692 - 128 78043278 - CHY_0083 - putative carbon monoxide oxidation system transcription regulator CooA-2 84 40.48 0 71950..72117 - 55 78044922 - CHY_0084 - hypothetical protein 85 51.23 +1 72111..74021 - 636 78044574 cooSII CHY_0085 - carbon-monoxide dehydrogenase, catalytic subunit 86 41.15 0 74040..74474 - 144 78045112 cooF1 CHY_0086 - iron-sulfur cluster-binding protein CooF 87 25.64 -2 74633..74749 - 38 78044551 - CHY_0087 - hypothetical protein 88 43.32 0 74861..76042 + 393 78044152 - CHY_0088 - RND family efflux transporter MFP subunit 89 43.29 0 76039..76731 + 230 78043038 - CHY_0089 - ABC transporter, ATP-binding protein 90 43.06 0 76742..77944 + 400 78042731 - CHY_0090 - ABC transporter, permease protein 91 39.23 0 77959..79416 + 485 78043258 - CHY_0091 - sensor histidine kinase 92 44.26 0 79413..80117 + 234 78045188 - CHY_0092 - DNA-binding response regulator 93 41.24 0 80149..80325 - 58 78043357 - CHY_0093 - hypothetical protein 94 44.55 0 80332..81240 - 302 78043294 - CHY_0094 - SPFH domain-containing protein/band 7 family protein 95 46.63 0 81616..82743 - 375 78042752 - CHY_0095 - iron-sulfur cluster-binding protein 96 29.03 -2 82826..82918 - 30 78042650 - CHY_0096 - hypothetical protein 97 40.00 0 82973..83872 + 299 78043821 - CHY_0097 - radical SAM domain-containing protein 98 44.06 0 83978..85198 + 406 78042642 - CHY_0098 - putative transporter 99 44.64 0 85120..86331 + 403 78044996 - CHY_0099 - putative methylase 100 30.97 -1 86372..87769 + 465 78044501 - CHY_0100 - ATP-binding protein 41.28 MEAN 5.58 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.