version 1.0
Bacillus pumilus SAFR-032, complete genome - 1..3704465 3681 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 38.85 0 1..1341 + 446 157690799 dnaA BPUM_0001 - chromosomal replication initiation protein 2 39.34 0 1409..2674 + 421 157690800 dnaN BPUM_0002 - DNA polymerase III subunit beta 3 39.17 0 2801..3040 + 79 157690801 yaaA BPUM_0003 - hypothetical protein 4 42.50 0 3057..4169 + 370 157690802 recF BPUM_0004 - recombination protein F 5 37.25 -1 4178..4432 + 84 157690803 yaaB BPUM_0005 - hypothetical protein 6 42.15 0 4478..6406 + 642 157690804 gyrB BPUM_0006 - DNA gyrase subunit B 7 41.75 0 6639..9158 + 839 157690805 gyrA BPUM_0007 - DNA gyrase subunit A 8 36.98 -1 14579..14770 + 63 157690806 csfB BPUM_0008 - hypothetical protein 9 36.59 -1 14900..15514 + 204 157690807 xpaC BPUM_0009 - 5-bromo-4-chloroindolyl phosphate hydrolysis protein 10 40.72 0 15726..16592 + 288 157690808 yaaN BPUM_0010 - toxic anion resistance protein TelA 11 43.48 0 16670..18079 + 469 157690809 yaaO BPUM_0011 - arginine/lysine/ornithine decarboxylase 12 43.04 0 18076..18714 + 212 157690810 tmk BPUM_0012 - thymidylate kinase 13 38.79 0 18794..19123 + 109 157690811 yaaQ BPUM_0013 - hypothetical protein 14 38.32 0 19136..19576 + 146 157690812 yaaR BPUM_0014 - hypothetical protein 15 41.31 0 19588..20577 + 329 157690813 holB BPUM_0015 - DNA polymerase III subunit delta' 16 41.18 0 20580..21407 + 275 157690814 yaaT BPUM_0016 - signal peptidase II 17 39.27 0 21422..21775 + 117 157690815 yabA BPUM_0017 - DNA replication intiation control protein YabA 18 40.46 0 21831..22574 + 247 157690816 yabB BPUM_0018 - O-methyltransferase 19 37.71 0 22561..22857 + 98 157690817 yazA BPUM_0019 - endonuclease 20 40.84 0 22835..23713 + 292 157690818 yabC BPUM_0020 - methyltransferase 21 35.79 -1 23759..24043 - 94 157690819 - BPUM_0021 - transcriptional regulator 22 40.08 0 24570..26570 + 666 157690820 metG BPUM_0022 - methionyl-tRNA synthetase 23 40.62 0 26653..27420 + 255 157690821 yabD BPUM_0023 - TatD deoxyribonuclease 24 40.32 0 27665..28867 + 400 157690822 yabE BPUM_0024 - hypothetical protein 25 45.63 +1 29028..29588 + 186 157690823 rnmV BPUM_0025 - ribonuclease M5 26 41.52 0 29581..30459 + 292 157690824 ksgA BPUM_0026 - dimethyladenosine transferase 27 42.49 0 30590..31474 + 294 157690825 yabG BPUM_0027 - sporulation-specific U57 family peptidase 28 41.47 0 31688..31945 + 85 157690826 veg BPUM_0028 - hypothetical protein 29 46.77 +1 32109..32294 + 61 157690827 sspF BPUM_0029 - small acid-soluble spore protein F 30 44.37 0 32441..33310 + 289 157690828 ispE BPUM_0030 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 31 41.13 0 33366..34199 + 277 157690829 purR BPUM_0031 - purine operon repressor 32 40.74 0 34236..34613 + 125 157690830 yabJ BPUM_0032 - hypothetical protein 33 43.43 0 34839..35135 + 98 157690831 spoVG BPUM_0033 - regulatory protein SpoVG 34 42.33 0 35305..36705 + 466 157690832 gcaD BPUM_0034 - UDP-N-acetylglucosamine pyrophosphorylase 35 41.61 0 36728..37681 + 317 157690833 prs BPUM_0035 - ribose-phosphate pyrophosphokinase 36 41.15 0 37819..38445 + 208 157690834 ctc BPUM_0036 - 50S ribosomal protein L25/general stress protein Ctc 37 40.39 0 38585..39151 + 188 157690835 spoVC BPUM_0037 - peptidyl-tRNA hydrolase 38 38.96 0 39207..39437 + 76 157690836 yabK BPUM_0038 - hypothetical protein 39 43.21 0 39505..43038 + 1177 157690837 mfd BPUM_0039 - transcription-repair coupling factor 40 43.39 0 43178..43714 + 178 157690838 spoVT BPUM_0040 - stage V sporulation protein T 41 45.17 +1 43909..45513 + 534 157690839 yabM BPUM_0041 - MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter 42 44.51 0 45503..46987 + 494 157690840 yabN BPUM_0042 - tetrapyrrole methyltransferase family protein 43 39.46 0 46984..47244 + 86 157690841 yabO BPUM_0043 - S4 RNA-binding domain-containing protein 44 39.16 0 47319..47627 + 102 157690842 yabP BPUM_0044 - hypothetical protein 45 42.72 0 47624..48262 + 212 157690843 yabQ BPUM_0045 - hypothetical protein 46 39.20 0 48281..48655 + 124 157690844 divIC BPUM_0046 - cell-division initiation protein 47 39.35 0 48738..49136 + 132 157690845 yabR BPUM_0047 - hypothetical protein 48 41.22 0 49690..52173 + 827 157690846 spoIIE BPUM_0048 - phosphoprotein phosphatase 49 43.13 0 52250..52984 + 244 157690847 yabS BPUM_0049 - hypothetical protein 50 42.86 0 52968..53975 + 335 157690848 yabT BPUM_0050 - serine/threonine protein kinase 51 40.38 0 54072..55475 + 467 157690849 tilS BPUM_0051 - tRNA(Ile)-lysidine synthase 52 38.15 0 55491..56030 + 179 157690850 hprT BPUM_0052 - hypoxanthine phosphoribosyltransferase 53 43.88 0 56126..58030 + 634 157690851 ftsH BPUM_0053 - M41 family endopeptidase FtsH 54 41.51 0 58188..58970 + 260 157690852 yacB BPUM_0054 - pantothenate kinase 55 41.78 0 58986..59861 + 291 157690853 hslO BPUM_0055 - Hsp33-like chaperonin 56 40.37 0 59908..60816 + 302 157690854 yacD BPUM_0056 - peptidylprolyl isomerase 57 45.02 +1 60894..61817 + 307 157690855 cysK BPUM_0057 - cysteine synthase 58 42.92 0 61942..63360 + 472 157690856 pabB BPUM_0058 - anthranilate synthase component I 59 41.75 0 63374..63967 + 197 157690857 pabA BPUM_0059 - para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 60 41.93 0 63964..64812 + 282 157690858 pabC BPUM_0060 - 4-amino-4-deoxychorismate lyase 61 43.82 0 64823..65680 + 285 157690859 sul BPUM_0061 - dihydropteroate synthase 62 43.36 0 65697..66035 + 112 157690860 folB BPUM_0062 - dihydroneopterin aldolase 63 40.28 0 66032..66535 + 167 157690861 folK BPUM_0063 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 64 41.45 0 66487..66720 + 77 157690862 yazB BPUM_0064 - transcriptional regulator 65 44.01 0 66713..67714 + 333 157690863 yacF BPUM_0065 - dihydrouridine synthase 66 41.00 0 67805..69304 + 499 157690864 lysS BPUM_0066 - lysyl-tRNA synthetase 67 29.73 -2 70863..70973 + 36 157690865 - BPUM_0067 - hypothetical protein 68 37.20 -1 76194..76658 + 154 157690866 ctsR BPUM_0068 - transcriptional regulator CtsR 69 39.51 0 76664..77230 + 188 157690867 mcsA BPUM_0069 - transcriptional regulator 70 40.84 0 77235..78326 + 363 157690868 mcsB BPUM_0070 - ATP:guanido phosphotransferase 71 43.19 0 78323..80758 + 811 157690869 clpC BPUM_0071 - class III stress response-related ATPase 72 44.47 0 80912..82231 + 439 157690870 radA BPUM_0072 - DNA repair protein RadA 73 40.65 0 82234..83313 + 359 157690871 disA BPUM_0073 - DNA integrity scanning protein DisA 74 38.15 0 83467..84567 + 366 157690872 yacL BPUM_0074 - hypothetical protein 75 45.80 +1 84581..85270 + 229 157690873 ispD BPUM_0075 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 76 47.17 +1 85274..85750 + 158 157690874 ispF BPUM_0076 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 77 42.29 0 85845..87296 + 483 157690875 gltX BPUM_0077 - glutamyl-tRNA synthetase 78 46.18 +1 87608..88261 + 217 157690876 cysE BPUM_0078 - serine O-acetyltransferase 79 41.04 0 88258..89658 + 466 157690877 cysS BPUM_0079 - cysteinyl-tRNA synthetase 80 43.29 0 89662..90093 + 143 157690878 yazC BPUM_0080 - ribonuclease III 81 42.67 0 90077..90826 + 249 157690879 yacO BPUM_0081 - tRNA/rRNA methyltransferase 82 41.72 0 90829..91341 + 170 157690880 yacP BPUM_0082 - hypothetical protein 83 37.75 0 91405..92061 + 218 157690881 sigH BPUM_0083 - RNA polymerase factor sigma-70 84 34.67 -1 92138..92287 + 49 157690882 rpmGB BPUM_0084 - 50S ribosomal protein L33 85 30.51 -2 92323..92499 + 58 157690883 secE BPUM_0085 - preprotein translocase subunit SecE 86 41.01 0 92670..93203 + 177 157690884 nusG BPUM_0086 - transcription antitermination protein NusG 87 42.92 0 93321..93800 + 159 157690885 rplK BPUM_0087 - 50S ribosomal protein L11 88 42.06 0 93900..94598 + 232 157690886 rplA BPUM_0088 - 50S ribosomal protein L1 89 41.12 0 94857..95357 + 166 157690887 rplJ BPUM_0089 - 50S ribosomal protein L10 90 39.07 0 95399..95764 + 121 157690888 rplL BPUM_0090 - 50S ribosomal protein L7/L12 91 40.26 0 95862..96467 + 201 157690889 ybxB BPUM_0091 - 16S rRNA methyltransferase 92 27.33 -2 96554..96703 - 49 157690890 - BPUM_0092 - hypothetical protein 93 43.94 0 96714..100304 + 1196 157690891 rpoB BPUM_0093 - DNA-directed RNA polymerase subunit beta 94 43.56 0 100366..103965 + 1199 157690892 rpoC BPUM_0094 - DNA-directed RNA polymerase subunit beta' 95 40.96 0 104111..104359 + 82 157690893 ybxF BPUM_0095 - putative ribosomal protein L7Ae-like 96 44.05 0 104472..104891 + 139 157690894 rpsL BPUM_0096 - 30S ribosomal protein S12 97 42.89 0 105012..105482 + 156 157690895 rpsG BPUM_0097 - 30S ribosomal protein S7 98 43.10 0 105537..107615 + 692 157690896 fusA BPUM_0098 - elongation factor G 99 44.00 0 107734..108924 + 396 157690897 tufA BPUM_0099 - elongation factor Tu 100 39.17 0 109035..109994 + 319 157690898 ybaC BPUM_0100 - alpha/beta fold family hydrolase 41.07 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0