IslandPath Analysis: Brucella suis ATCC 23445



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 57.10   STD DEV: 4.24
Brucella suis ATCC 23445 chromosome II, complete sequence - 1..1400844
1320 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 54.02	0	155..1348	+	397	163844200	-	BSUIS_B0003	-	hypothetical protein
2	 47.33	-2	1413..1562	-	49	163844201	-	BSUIS_B0004	-	hypothetical protein
3	 52.27	-1	1551..1814	+	87	163844202	-	BSUIS_B0005	-	hypothetical protein
4	 51.75	-1	1963..2076	+	37	163844203	-	BSUIS_B0006	-	hypothetical protein
5	 62.00	+1	2092..3033	+	313	163844204	rbsK	BSUIS_B0007	-	ribokinase
6	 56.36	0	3110..4108	-	332	163844205	-	BSUIS_B0008	-	hypothetical protein
7	 63.05	+1	4131..5042	-	303	163844206	-	BSUIS_B0009	-	hypothetical protein
8	 62.04	+1	5039..6118	-	359	163844207	-	BSUIS_B0010	-	hypothetical protein
9	 62.53	+1	6180..7751	-	523	163844208	-	BSUIS_B0011	-	hypothetical protein
10	 55.83	0	7754..8860	-	368	163844209	-	BSUIS_B0012	-	hypothetical protein
11	 58.08	0	9104..9697	+	197	163844210	-	BSUIS_B0013	-	hypothetical protein
12	 62.75	+1	9669..10409	-	246	163844211	-	BSUIS_B0014	-	hypothetical protein
13	 61.52	+1	10384..11160	-	258	163844212	-	BSUIS_B0015	-	2,3-dihydroxybenzoate-2,3-dehydrogenase
14	 60.86	0	12084..13703	-	539	163844213	-	BSUIS_B0017	-	enterobactin synthase subunit E
15	 61.39	+1	13810..14985	-	391	163844214	-	BSUIS_B0018	-	isochorismate synthase
16	 58.84	0	15057..16448	+	463	163844215	-	BSUIS_B0019	-	hypothetical protein
17	 58.05	0	16496..17284	-	262	163844216	-	BSUIS_B0020	-	hypothetical protein
18	 55.80	0	17281..18090	-	269	163844217	-	BSUIS_B0021	-	hypothetical protein
19	 50.00	-1	18151..18456	-	101	163844218	-	BSUIS_B0022	-	pentapeptide MXKDX repeat-containing protein
20	 59.81	0	18641..19165	+	174	163844219	-	BSUIS_B0023	-	sigma-70 family RNA polymerase sigma factor
21	 63.99	+1	19155..19790	+	211	163844220	-	BSUIS_B0024	-	hypothetical protein
22	 58.57	0	19836..20576	-	246	163844221	-	BSUIS_B0025	-	hypothetical protein
23	 55.51	0	20694..22109	+	471	163844222	-	BSUIS_B0026	-	hypothetical protein
24	 57.47	0	22151..23140	+	329	163844223	-	BSUIS_B0027	-	hypothetical protein
25	 61.26	0	23144..24364	+	406	163844224	-	BSUIS_B0028	-	hypothetical protein
26	 58.83	0	24364..25116	+	250	163844225	-	BSUIS_B0029	-	hypothetical protein
27	 58.58	0	25116..25832	+	238	163844226	-	BSUIS_B0030	-	hypothetical protein
28	 61.28	0	25884..26366	+	160	163844227	-	BSUIS_B0031	-	hypothetical protein
29	 59.21	0	26370..27107	+	245	163844228	-	BSUIS_B0032	-	hypothetical protein
30	 63.48	+1	27125..27877	+	250	163844229	-	BSUIS_B0033	-	hypothetical protein
31	 62.28	+1	27987..30176	+	729	163844230	-	BSUIS_B0034	-	hypothetical protein
32	 61.77	+1	30195..31460	+	421	163844231	-	BSUIS_B0035	-	branched-chain alpha-keto acid dehydrogenase subunit E2
33	 61.70	+1	31561..32346	+	261	163844232	-	BSUIS_B0036	-	hypothetical protein
34	 65.31	+1	32625..32918	+	97	163844233	-	BSUIS_B0037	-	hypothetical protein
35	 59.22	0	32872..33153	-	93	163844234	-	BSUIS_B0038	-	hypothetical protein
36	 59.23	0	33271..35988	+	905	163844235	mgtA	BSUIS_B0039	-	magnesium-translocating P-type ATPase
37	 64.39	+1	36073..36423	+	116	163844236	-	BSUIS_B0040	-	hypothetical protein
38	 60.78	0	36554..36757	+	67	163844237	-	BSUIS_B0041	-	hypothetical protein
39	 59.14	0	36759..37475	+	238	163844238	-	BSUIS_B0042	-	hypothetical protein
40	 57.80	0	37550..38620	+	356	163844239	-	BSUIS_B0043	-	hypothetical protein
41	 55.24	0	38617..39255	+	212	163844240	-	BSUIS_B0044	-	hypothetical protein
42	 54.27	0	39641..40003	-	120	163844241	-	BSUIS_B0046	-	hypothetical protein
43	 46.49	-2	40119..40232	-	37	163844242	-	BSUIS_B0047	-	hypothetical protein
44	 58.25	0	40322..41212	+	296	163844243	-	BSUIS_B0048	-	hypothetical protein
45	 61.13	0	41374..42150	+	258	163844244	-	BSUIS_B0049	-	histidinol-phosphate phosphatase
46	 61.24	0	42221..43216	-	331	163844245	-	BSUIS_B0050	-	hypothetical protein
47	 49.07	-1	43256..43471	-	71	163844246	-	BSUIS_B0051	-	hypothetical protein
48	 61.90	+1	43566..43964	-	132	163844247	-	BSUIS_B0052	-	hypothetical protein
49	 49.05	-1	44016..44225	+	69	163844248	-	BSUIS_B0053	-	hypothetical protein
50	 54.76	0	44198..44449	+	83	163844249	-	BSUIS_B0054	-	hypothetical protein
51	 56.05	0	44528..44998	+	156	163844250	-	BSUIS_B0055	-	hypothetical protein
52	 55.79	0	46454..46738	-	94	163844251	-	BSUIS_B0057	-	hypothetical protein
53	 60.40	0	46828..51579	+	1583	163844252	-	BSUIS_B0058	-	hypothetical protein
54	 60.41	0	51661..53115	+	484	163844253	gltD	BSUIS_B0059	-	glutamate synthase subunit beta
55	 52.92	0	53160..54563	-	467	163844254	-	BSUIS_B0060	-	hypothetical protein
56	 58.83	0	54773..55933	-	386	163844255	-	BSUIS_B0061	-	hypothetical protein
57	 57.61	0	56184..56702	-	172	163844256	-	BSUIS_B0062	-	hypothetical protein
58	 58.68	0	56848..57936	-	362	163844257	-	BSUIS_B0063	-	P-type DNA transfer ATPase VirB11
59	 58.50	0	57917..59092	-	391	163844258	-	BSUIS_B0064	-	hypothetical protein
60	 57.59	0	59089..59958	-	289	163844259	-	BSUIS_B0065	-	P-type conjugative transfer protein VirB9
61	 55.83	0	59955..60674	-	239	163844260	-	BSUIS_B0066	-	hypothetical protein
62	 58.05	0	60677..60850	-	57	163844261	-	BSUIS_B0067	-	hypothetical protein
63	 55.56	0	61014..62057	-	347	163844262	-	BSUIS_B0068	-	hypothetical protein
64	 55.79	0	62241..62957	-	238	163844263	-	BSUIS_B0069	-	P-type DNA transfer protein VirB5
65	 55.61	0	62962..65457	-	831	163844264	-	BSUIS_B0070	-	type IV secretion/conjugal transfer ATPase
66	 55.56	0	65457..65807	-	116	163844265	-	BSUIS_B0071	-	hypothetical protein
67	 55.97	0	65821..66138	-	105	163844266	-	BSUIS_B0072	-	hypothetical protein
68	 56.76	0	66574..67290	-	238	163844267	-	BSUIS_B0073	-	hypothetical protein
69	 52.38	-1	67678..67782	+	34	163844268	-	BSUIS_B0074	-	hypothetical protein
70	 59.25	0	67794..69020	-	408	163844269	-	BSUIS_B0075	-	lytic murein transglycosylase
71	 57.05	0	69432..70325	+	297	163844270	galU	BSUIS_B0076	-	UTP-glucose-1-phosphate uridylyltransferase
72	 60.17	0	70378..71916	-	512	163844271	-	BSUIS_B0077	-	hypothetical protein
73	 59.58	0	72057..73058	+	333	163844272	-	BSUIS_B0078	-	KpsF/GutQ family sugar isomerase
74	 57.69	0	73285..73752	-	155	163844273	-	BSUIS_B0079	-	hypothetical protein
75	 58.97	0	73773..74759	-	328	163844274	-	BSUIS_B0080	-	hypothetical protein
76	 58.17	0	74892..75950	-	352	163844275	hemH	BSUIS_B0081	-	ferrochelatase
77	 60.37	0	76088..76468	-	126	163844276	-	BSUIS_B0082	-	hypothetical protein
78	 58.30	0	76610..78055	-	481	163844277	-	BSUIS_B0083	-	hypothetical protein
79	 57.68	0	77958..78836	-	292	163844278	-	BSUIS_B0084	-	hypothetical protein
80	 59.32	0	78770..79939	-	389	163844279	pabB	BSUIS_B0085	-	para-aminobenzoate synthase component I
81	 56.90	0	79949..81811	-	620	163844280	-	BSUIS_B0086	-	pepF/M3 family oligoendopeptidase
82	 59.42	0	82159..83649	+	496	163844281	-	BSUIS_B0087	-	hypothetical protein
83	 64.05	+1	83990..85903	+	637	163844282	-	BSUIS_B0088	-	hypothetical protein
84	 61.50	+1	85969..86607	-	212	163844283	eda	BSUIS_B0089	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
85	 57.63	0	87508..88425	+	305	163844284	-	BSUIS_B0091	-	hypothetical protein
86	 55.07	0	88460..88666	+	68	163844285	-	BSUIS_B0092	-	hypothetical protein
87	 56.48	0	88706..89461	+	251	163844286	modA	BSUIS_B0093	-	molybdate ABC transporter, periplasmic molybdate-binding protein
88	 59.97	0	89472..90158	+	228	163844287	modB	BSUIS_B0094	-	molybdate ABC transporter permease protein
89	 61.30	0	90155..91234	+	359	163844288	modC	BSUIS_B0095	-	molybdate ABC transporter, ATP-binding protein
90	 55.75	0	91304..91981	+	225	163844289	-	BSUIS_B0096	-	hypothetical protein
91	 55.88	0	91974..92177	+	67	163844290	-	BSUIS_B0097	-	hypothetical protein
92	 37.64	-2	92229..92576	-	115	163844291	-	BSUIS_B0098	-	hypothetical protein
93	 46.15	-2	92269..92424	+	51	163844292	-	BSUIS_B0099	-	hypothetical protein
94	 37.68	-2	92634..92978	-	114	163844293	-	BSUIS_B0100	-	hypothetical protein
95	 59.42	0	93120..94223	-	367	163844294	-	BSUIS_B0101	-	hypothetical protein
96	 54.47	0	94223..94927	-	234	163844295	-	BSUIS_B0102	-	hypothetical protein
97	 59.73	0	94967..95860	-	297	163844296	-	BSUIS_B0103	-	hypothetical protein
98	 60.12	0	95864..97069	-	401	163844297	-	BSUIS_B0104	-	amidase
99	 60.23	0	97654..98787	+	377	163844298	-	BSUIS_B0106	-	hypothetical protein
100	 59.63	0	98863..100581	-	572	163844299	-	BSUIS_B0107	-	hypothetical protein
57.10	MEAN

4.24	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.