IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 57.15   STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 59.41	0	634..2274	+	546	161617992	dnaA	BCAN_A0001	-	chromosomal replication initiation protein
2	 58.71	0	2503..3696	+	397	161617993	dnaN	BCAN_A0002	-	DNA polymerase III subunit beta
3	 61.30	0	3878..5032	+	384	161617994	recF	BCAN_A0003	-	recombination protein F
4	 61.43	+1	5070..5852	+	260	161617995	-	BCAN_A0004	-	molybdopterin biosynthesis protein MoeB
5	 57.68	0	5869..6825	-	318	161617996	-	BCAN_A0005	-	D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
6	 59.16	0	6822..8447	-	541	161617997	-	BCAN_A0006	-	ABC transporter related
7	 58.07	0	8471..9610	-	379	161617998	-	BCAN_A0007	-	binding-protein-dependent transport systems inner membrane component
8	 55.92	0	9610..10707	-	365	161617999	-	BCAN_A0008	-	hypothetical protein
9	 57.47	0	10819..12666	-	615	161618000	-	BCAN_A0009	-	extracellular solute-binding protein
10	 55.91	0	12680..14548	-	622	161618001	-	BCAN_A0010	-	extracellular solute-binding protein
11	 53.09	0	14779..15102	-	107	161618002	-	BCAN_A0011	-	hypothetical protein
12	 47.76	-2	15148..15348	-	66	161618003	-	BCAN_A0012	-	hypothetical protein
13	 36.48	-2	15388..15546	-	52	161618004	-	BCAN_A0013	-	hypothetical protein
14	 59.26	0	16003..17109	-	368	161618005	livJ	BCAN_A0014	-	Leu/Ile/Val-binding protein precursor
15	 52.74	-1	17381..17581	+	66	161618006	-	BCAN_A0015	-	hypothetical protein
16	 61.51	+1	17578..18372	-	264	161618007	-	BCAN_A0016	-	enoyl-CoA hydratase
17	 62.02	+1	19224..21245	-	673	161618008	-	BCAN_A0018	-	methylcrotonyl-CoA carboxylase
18	 62.25	+1	21257..22864	-	535	161618009	-	BCAN_A0019	-	hypothetical protein
19	 58.78	0	22864..24042	-	392	161618010	-	BCAN_A0020	-	isovaleryl-CoA dehydrogenase
20	 59.98	0	24189..26177	-	662	161618011	-	BCAN_A0021	-	acetoacetyl-CoA synthetase
21	 53.33	0	26362..26796	-	144	161618012	-	BCAN_A0022	-	CHRD domain-containing protein
22	 54.90	0	26973..28094	-	373	161618013	mdmB	BCAN_A0023	-	acyltransferase mdmB
23	 55.99	0	28617..29000	-	127	161618014	-	BCAN_A0025	-	hypothetical protein
24	 61.27	0	29385..30737	+	450	161618015	aroA	BCAN_A0026	-	3-phosphoshikimate 1-carboxyvinyltransferase
25	 62.42	+1	30734..31393	+	219	161618016	cmk	BCAN_A0027	-	cytidylate kinase
26	 58.02	0	31609..33309	+	566	161618017	rpsA	BCAN_A0028	-	30S ribosomal protein S1
27	 59.84	0	33727..34737	-	336	161618018	-	BCAN_A0029	-	hypothetical protein
28	 57.33	0	34853..35752	+	299	161618019	-	BCAN_A0030	-	LysR family transcriptional regulator
29	 28.99	-2	35746..36321	-	191	161618020	-	BCAN_A0031	-	hypothetical protein
30	 55.22	0	36357..37640	-	427	161618021	-	BCAN_A0032	-	lytic murein transglycosylase
31	 60.73	0	37656..38261	-	201	161618022	recR	BCAN_A0033	-	recombination protein RecR
32	 59.57	0	38392..38715	-	107	161618023	-	BCAN_A0034	-	hypothetical protein
33	 61.91	+1	38740..40548	-	602	161618024	dnaX	BCAN_A0035	-	DNA polymerase III subunits gamma and tau
34	 61.73	+1	40830..41234	+	134	161618025	-	BCAN_A0037	-	histidine triad (HIT) protein
35	 60.13	0	41263..42210	+	315	161618026	-	BCAN_A0038	-	peroxisomal NADH pyrophosphatase NUDT12
36	 58.68	0	42211..43074	-	287	161618027	pheA	BCAN_A0039	-	prephenate dehydratase
37	 60.45	0	43163..43918	-	251	161618028	kdsB	BCAN_A0040	-	3-deoxy-manno-octulosonate cytidylyltransferase
38	 56.98	0	44296..44904	+	202	161618029	-	BCAN_A0041	-	cytochrome c
39	 61.59	+1	44949..45914	-	321	161618030	-	BCAN_A0042	-	hypothetical protein
40	 51.13	-1	45970..46278	+	102	161618031	-	BCAN_A0043	-	hypothetical protein
41	 56.02	0	46453..47466	+	337	161618032	cyoA	BCAN_A0044	-	ubiquinol oxidase, subunit II
42	 58.03	0	47546..49525	+	659	161618033	cyoB	BCAN_A0045	-	cytochrome o ubiquinol oxidase, subunit I
43	 57.94	0	49529..50158	+	209	161618034	cyoC	BCAN_A0046	-	cytochrome o ubiquinol oxidase, subunit III
44	 55.46	0	50158..50523	+	121	161618035	cyoD	BCAN_A0047	-	cytochrome o ubiquinol oxidase subunit IV
45	 66.87	+2	50993..51478	+	161	161618036	-	BCAN_A0048	-	SH3 type 3 domain-containing protein
46	 59.22	0	52074..53993	+	639	161618037	-	BCAN_A0049	-	surface antigen (D15)
47	 59.81	0	53990..58729	+	1579	161618038	-	BCAN_A0050	-	hypothetical protein
48	 57.44	0	58874..59599	+	241	161618039	-	BCAN_A0051	-	ErfK/YbiS/YcfS/YnhG family protein
49	 55.09	0	59650..59865	-	71	161618040	-	BCAN_A0052	-	hypothetical protein
50	 59.02	0	59935..60444	-	169	161618041	-	BCAN_A0053	-	hypothetical protein
51	 61.35	+1	60775..60981	-	68	161618042	-	BCAN_A0054	-	hypothetical protein
52	 58.61	0	60992..61996	-	334	161618043	-	BCAN_A0055	-	hypothetical protein
53	 59.65	0	62131..62529	-	132	161618044	-	BCAN_A0056	-	hypothetical protein
54	 58.59	0	62838..63233	-	131	161618045	-	BCAN_A0057	-	glyoxalase/bleomycin resistance protein/dioxygenase
55	 62.20	+1	63430..64593	+	387	161618046	-	BCAN_A0058	-	nucleotide-binding protein-like protein
56	 57.84	0	64790..66421	-	543	161618047	pgm	BCAN_A0059	-	phosphoglucomutase
57	 44.62	-2	66477..66662	-	61	161618048	-	BCAN_A0060	-	hypothetical protein
58	 59.84	0	66637..67530	-	297	161618049	-	BCAN_A0061	-	transcriptional regulatory protein
59	 54.65	0	67655..68578	+	307	161618050	-	BCAN_A0062	-	hypothetical protein
60	 58.94	0	68651..69349	+	232	161618051	-	BCAN_A0063	-	putative fructose transport system kinase
61	 58.99	0	69449..70138	+	229	161618052	-	BCAN_A0064	-	fumarylacetoacetate hydrolase domain-containing protein
62	 52.60	-1	70158..70349	+	63	161618053	-	BCAN_A0065	-	hypothetical protein
63	 46.30	-2	70411..70626	+	71	161618054	-	BCAN_A0066	-	hypothetical protein
64	 51.85	-1	70792..70980	+	62	161618055	-	BCAN_A0067	-	hypothetical protein
65	 62.15	+1	70995..71858	+	287	161618056	-	BCAN_A0068	-	lytic transglycosylase catalytic
66	 57.84	0	72044..72700	+	218	161618057	-	BCAN_A0069	-	hemolysin-3
67	 64.78	+1	76075..77661	-	528	161618058	-	BCAN_A0071	-	hypothetical protein
68	 63.89	+1	77552..78415	-	287	161618059	-	BCAN_A0072	-	hypothetical protein
69	 52.90	-1	78934..81156	+	740	161618060	-	BCAN_A0073	-	hypothetical protein
70	 53.52	0	81176..81913	+	245	161618061	-	BCAN_A0074	-	invasion associated locus B family protein
71	 58.23	0	81992..83212	-	406	161618062	argG	BCAN_A0075	-	argininosuccinate synthase
72	 57.74	0	84062..84565	-	167	161618063	-	BCAN_A0077	-	hypothetical protein
73	 59.22	0	84599..85834	-	411	161618064	-	BCAN_A0078	-	radical SAM protein
74	 51.04	-1	85778..85969	+	63	161618065	-	BCAN_A0079	-	hypothetical protein
75	 55.38	0	85954..86148	+	64	161618066	-	BCAN_A0080	-	hypothetical protein
76	 57.54	0	86094..86597	-	167	161618067	-	BCAN_A0081	-	hypothetical protein
77	 63.28	+1	87053..87436	-	127	161618068	-	BCAN_A0082	-	hypothetical protein
78	 54.76	0	87524..87817	-	97	161618069	-	BCAN_A0083	-	pterin-4-alpha-carbinolamine dehydratase
79	 55.61	0	88044..88649	+	201	161618070	-	BCAN_A0084	-	protein tyrosine phosphatase
80	 61.25	0	88559..89149	-	196	161618071	-	BCAN_A0085	-	2'-5' RNA ligase
81	 55.92	0	89330..90055	-	241	161618072	-	BCAN_A0086	-	arylesterase precursor
82	 61.73	+1	90202..90930	+	242	161618073	-	BCAN_A0087	-	ABC transporter related
83	 61.69	+1	90927..93476	+	849	161618074	-	BCAN_A0088	-	hypothetical protein
84	 57.99	0	93711..94448	+	245	161618075	-	BCAN_A0090	-	hypothetical protein
85	 59.44	0	94563..95102	+	179	161618076	pat	BCAN_A0091	-	phosphinothricin N-acetyltransferase
86	 54.73	0	95122..95523	-	133	161618077	-	BCAN_A0092	-	hypothetical protein
87	 56.87	0	96073..96807	-	244	161618078	-	BCAN_A0093	-	hypothetical protein
88	 56.74	0	96960..97100	-	46	161618079	-	BCAN_A0094	-	hypothetical protein
89	 60.27	0	97084..99771	-	895	161618080	acnA	BCAN_A0095	-	aconitate hydratase
90	 58.18	0	100115..100762	+	215	161618081	ccmA	BCAN_A0096	-	cytochrome c biogenesis protein CcmA
91	 62.31	+1	100762..101427	+	221	161618082	ccmB	BCAN_A0097	-	heme exporter protein CcmB
92	 58.52	0	101485..102270	+	261	161618083	ccmC	BCAN_A0098	-	heme exporter protein CcmC
93	 56.90	0	102267..102440	+	57	161618084	-	BCAN_A0099	-	Heme exporter protein D (CcmD)
94	 59.31	0	102437..103048	+	203	161618085	dsbE	BCAN_A0100	-	DsbE subfamily periplasmic protein thiol:disulfide oxidoreductase
95	 56.67	0	103235..103354	+	39	161618086	-	BCAN_A0101	-	hypothetical protein
96	 61.00	0	103297..105132	-	611	161618087	ilvD	BCAN_A0102	-	dihydroxy-acid dehydratase
97	 54.35	0	105314..105451	+	45	161618088	-	BCAN_A0103	-	hypothetical protein
98	 61.11	0	105532..105963	-	143	161618089	-	BCAN_A0104	-	hypothetical protein
99	 59.79	0	105990..106367	-	125	161618090	-	BCAN_A0105	-	response regulator receiver protein
100	 49.37	-1	106542..106778	-	78	161618091	-	BCAN_A0106	-	AsnC family transcriptional regulator
57.15	MEAN

4.17	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.