version 1.0
Clostridium botulinum A str. ATCC 3502, complete genome - 1..3886916 3572 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 27.77 0 1..1347 + 448 148378012 dnaA CBO0001 - chromosomal replication initiator protein DnaA 2 25.36 0 1610..2713 + 367 148378013 dnaG CBO0002 - DNA polymerase III, beta chain 3 24.15 -1 2732..2938 + 68 148378014 - CBO0003 - S4 domain protein 4 23.19 -1 2998..4101 + 367 148378015 recF CBO0004 - DNA replication and repair protein RecF 5 28.41 0 4122..4385 + 87 148378016 - CBO0005 - hypothetical protein 6 31.87 0 4403..6316 + 637 148378017 gyrB CBO0006 - DNA gyrase, B subunit 7 28.79 0 6342..8852 + 836 148378018 gyrA CBO0007 - DNA gyrase, A subunit 8 18.76 -2 14427..14879 + 150 148378019 - CBO0008 - hypothetical protein 9 24.90 0 14895..15416 + 173 148378020 - CBO0009 - putative transcriptional regulator 10 29.77 0 15517..16581 + 354 148378021 - CBO0010 - iron-sulfur cluster-binding protein 11 22.74 -1 16586..19267 + 893 148378022 - CBO0011 - hypothetical protein 12 22.01 -1 19404..20180 + 258 148378023 - CBO0012 - ErfK/YbiS/YcfS/YnhG family protein 13 25.18 0 20205..21602 + 465 148378024 - CBO0013 - dehydrogenase 14 24.29 -1 21619..21972 + 117 148378025 - CBO0014 - hypothetical protein 15 29.59 0 22342..23622 + 426 148378026 serS CBO0016 - seryl-tRNA synthetase 16 36.09 +1 26601..26963 + 120 148378027 - CBO0020 - exported protein 17 25.21 0 27036..27884 + 282 148378028 - CBO0021 - ABC transporter, ATP-binding protein 18 22.54 -1 27893..28726 + 277 148378029 - CBO0022 - membrane protein 19 19.65 -2 28738..29541 + 267 148378030 - CBO0023 - membrane protein 20 24.23 -1 29558..30370 + 270 148378031 - CBO0024 - membrane protein 21 23.20 -1 30610..31497 - 295 148378032 psd2 CBO0025 - phosphatidylserine decarboxylase 22 23.14 -1 31600..33198 - 532 148378033 - CBO0026 - hypothetical protein 23 23.36 -1 33274..33594 - 106 148378034 - CBO0027 - hypothetical protein 24 23.98 -1 33989..35527 + 512 148378035 - CBO0028 - putative sensory box sigma-54 dependent transcriptional regulator 25 33.50 +1 35687..36889 + 400 148378036 mdeA CBO0029 - methionine gamma-lyase 26 26.94 0 37013..37450 + 145 148378037 - CBO0030 - cytidine/deoxycytidylate deaminase family protein 27 27.92 0 38095..39720 + 541 148378038 dnaH CBO0031 - DNA polymerase III, gamma and tau subunits 28 36.26 +1 39785..40126 + 113 148378039 - CBO0032 - hypothetical protein 29 30.49 0 40159..40755 + 198 148378040 recR CBO0033 - recombination protein recR 30 26.12 0 40785..41075 + 96 148378041 - CBO0034 - hypothetical protein 31 23.75 -1 41225..41485 + 86 148378042 bofA CBO0035 - sigma-K factor processing regulatory protein BofA 32 27.56 0 41636..42328 + 230 148378043 sfsA CBO0036 - sugar fermentation stimulation protein 33 29.24 0 42384..42872 + 162 148378044 - CBO0037 - hydrolase, NUDIX family 34 33.33 +1 42990..43712 + 240 148378045 - CBO0038 - hypothetical protein 35 25.60 0 43846..44634 + 262 148378046 - CBO0039 - iron-sulfur cluster-binding protein 36 28.79 0 45197..45901 + 234 148378047 - CBO0040 - thiF domain protein 37 24.43 -1 45960..47093 + 377 148378048 - CBO0041 - major facilitator superfamily protein 38 21.16 -1 47122..48066 + 314 148378049 - CBO0042 - GNAT family acetyltransferase 39 28.31 0 53621..54217 - 198 148378050 - CBO0042A - uracil-DNA glycosylase family protein 40 25.35 0 60532..61095 + 187 148378051 - CBO0043 - RNA polymerase factor sigma-70 41 27.30 0 61092..62534 + 480 148378052 - CBO0043A - hypothetical protein 42 20.92 -1 68655..68936 + 93 148378053 - CBO0045 - hypothetical protein 43 28.09 0 75254..75997 + 247 148378054 - CBO0047 - peptidil-prolyl isomerase family protein 44 26.88 0 81736..82479 + 247 148378055 - CBO0048 - NAD-dependent deacetylase 45 27.61 0 82665..83573 - 302 148378056 - CBO0049 - LD-carboxypeptidase family protein 46 25.90 0 83609..84550 - 313 148378057 - CBO0050 - transporter, CorA metal ion transporter family 47 19.84 -2 84915..85418 + 167 148378058 - CBO0051 - hypothetical protein 48 26.79 0 85423..86583 - 386 148378059 - CBO0052 - amidohydrolase 49 25.35 0 86837..87049 + 70 148378060 - CBO0052A - hypothetical protein 50 25.60 0 87028..88476 + 482 148378061 - CBO0053 - Orn/Lys/Arg decarboxylase 51 27.30 0 88500..89195 + 231 148378062 - CBO0054 - putative thymidylate kinase 52 33.03 +1 89276..89605 + 109 148378063 - CBO0055 - hypothetical protein 53 22.65 -1 89623..90567 + 314 148378064 - CBO0056 - putative DNA polymerase III, delta prime subunit 54 29.84 0 90569..91483 + 304 148378065 - CBO0057 - PSP1 domain protein 55 27.94 0 91495..91698 + 67 148378066 - CBO0058 - hypothetical protein 56 41.52 +2 91780..91950 + 56 148378067 - CBO0059 - ferredoxin, 4Fe-4S 57 28.34 0 92071..92811 + 246 148378068 - CBO0060 - hypothetical protein 58 25.38 0 92831..93685 + 284 148378069 - CBO0061 - tetrapyrrole methylase family protein 59 34.24 +1 93841..94944 + 367 148378070 - CBO0062 - NlpC/P60 family protein 60 28.86 0 95044..95289 - 81 148378071 abrB CBO0063 - AbrB family transcriptional regulator 61 22.88 -1 96096..96707 + 203 148378072 - CBO0064 - hypothetical protein 62 29.37 0 97129..98340 + 403 148378073 arcA1 CBO0065 - arginine deiminase 63 28.85 0 98426..98893 - 155 148378074 ispF CBO0066 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 64 18.02 -2 98969..99301 - 110 148378075 - CBO0067 - hypothetical protein 65 26.21 0 99629..100498 + 289 148378076 - CBO0068 - polysaccharide deacetylase family protein 66 23.46 -1 100767..101009 - 80 148378077 - CBO0069 - hypothetical protein 67 30.21 0 101129..101704 + 191 148378078 spmA CBO0070 - spore maturation protein A 68 30.83 0 101717..102235 + 172 148378079 spmB CBO0071 - spore maturation protein B 69 28.33 0 102480..103817 - 445 148378080 - CBO0072 - MATE efflux family protein 70 30.72 0 103961..104533 + 190 148378081 - CBO0073 - uracil-DNA glycosylase 71 20.00 -2 104562..104996 + 144 148378082 - CBO0074 - MarR family transcriptional regulator 72 29.67 0 105378..107315 + 645 148378083 metG CBO0075 - methionyl-tRNA synthetase 73 22.44 -1 107480..108985 + 501 148378084 - CBO0076 - hypothetical protein 74 28.05 0 109136..109930 + 264 148378085 - CBO0077 - hydrolase, TatD family 75 32.77 0 110158..111216 + 352 148378086 - CBO0079 - 3D/G5 domain protein 76 32.42 0 111289..111834 + 181 148378087 - CBO0080 - primase-related protein 77 27.36 0 111827..112663 + 278 148378088 ksgA CBO0081 - dimethyladenosine transferase 78 26.73 0 112742..113983 + 413 148378089 - CBO0082 - hypothetical protein 79 21.94 -1 114140..114727 + 195 148378090 - CBO0083 - hypothetical protein 80 23.14 -1 114896..115729 + 277 148378091 - CBO0084 - putative lipoprotein 81 28.91 0 115897..116958 + 353 148378092 - CBO0085 - macrolide ABC transporter 82 29.89 0 116969..117664 + 231 148378093 - CBO0086 - macrolide ABC transporter ATP-binding protein 83 29.61 0 117661..118869 + 402 148378094 - CBO0087 - macrolide ABC transporter permease 84 32.27 0 118951..119793 + 280 148378095 - CBO0088 - ATP/GTP-binding-like protein 85 31.77 0 119933..120124 + 63 148378096 - CBO0089 - iron-sulfur cluster-binding protein 86 17.95 -2 120139..120333 + 64 148378097 - CBO0090 - membrane protein 87 24.86 -1 120570..120746 - 58 148378098 - CBO0091 - hypothetical protein 88 19.33 -2 120824..121894 + 356 148378099 - CBO0092 - putative diguanylate cyclase 89 24.55 -1 121951..122679 + 242 148378100 - CBO0093 - Mg2+ transporter 90 29.69 0 122969..125110 + 713 148378101 nrdD CBO0094 - anaerobic ribonucleoside-triphosphate reductase 91 25.19 0 125127..125642 + 171 148378102 nrdG CBO0095 - anaerobic ribonucleoside-triphosphate reductase activating protein 92 19.70 -2 126179..126853 - 224 148378103 - CBO0096 - hypothetical protein 93 26.55 0 126855..127193 - 112 148378104 - CBO0097 - PadR family transcriptional regulator 94 25.35 0 127314..127952 - 212 148378105 - CBO0098 - putative zinc-dependent hydrolase 95 30.32 0 128388..131510 + 1040 148378106 ileS CBO0099 - isoleucyl-tRNA synthetase 96 27.33 0 131661..132659 + 332 148378107 ccpA CBO0100 - LacI family transcriptional regulator 97 23.86 -1 132875..136927 + 1350 148378108 - CBO0101 - hypothetical protein 98 27.90 0 137002..138069 + 355 148378109 - CBO0102 - putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 99 28.76 0 138405..139694 + 429 148378110 - CBO0103 - hypothetical protein 100 28.13 0 139699..140505 + 268 148378111 - CBO0104 - hypothetical protein 28.87 MEAN 3.98 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.