IslandPath Analysis: Rickettsia bellii OSU 85-389



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.14   STD DEV: 4.18
Rickettsia bellii OSU 85-389, complete genome - 1..1528980
1476 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 27.74	0	1..822	+	273	157826386	-	A1I_00005	-	hypothetical protein
2	 28.33	0	856..1215	+	119	157826387	-	A1I_00010	-	thioredoxin
3	 28.78	0	1227..1973	+	248	157826388	-	A1I_00015	-	O-antigen export system ATP-binding protein RfbE
4	 27.67	0	1970..2746	+	258	157826389	-	A1I_00020	-	O-antigen export system permease protein RfbA
5	 33.24	0	2743..5997	+	1084	157826390	-	A1I_00025	-	putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase
6	 33.33	0	6020..6439	-	139	157826391	-	A1I_00030	-	SOS-response transcriptional repressors (RecA-mediated autopeptidases)
7	 27.37	0	6506..7612	-	368	157826392	-	A1I_00035	-	acyltransferase family protein
8	 31.18	0	7643..8665	-	340	157826393	-	A1I_00040	-	hypothetical protein
9	 33.33	0	8771..9265	-	164	157826394	-	A1I_00045	-	hypothetical protein
10	 30.59	0	9284..9829	-	181	157826395	-	A1I_00050	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
11	 31.01	0	9853..11532	-	559	157826396	-	A1I_00055	-	putative inner membrane protein translocase component YidC
12	 27.61	0	11826..12944	-	372	157826397	-	A1I_00060	-	hypothetical protein
13	 30.81	0	13108..13899	+	263	157826398	-	A1I_00065	-	prolipoprotein diacylglyceryl transferase
14	 34.97	0	13878..14978	+	366	157826399	-	A1I_00070	-	hypothetical protein
15	 34.38	0	15224..15703	-	159	157826400	-	A1I_00075	-	hypothetical protein
16	 36.86	+1	15696..17423	-	575	157826401	-	A1I_00080	-	glutathione-regulated potassium-efflux system protein KefB
17	 27.73	0	17434..17808	-	124	157826402	-	A1I_00085	-	Iojap-related protein
18	 26.84	-1	17880..18110	+	76	157826403	-	A1I_00090	-	BolA-like protein
19	 29.46	0	18331..18459	-	42	157826404	-	A1I_00095	-	hypothetical protein
20	 34.70	0	18475..19719	-	414	157826405	-	A1I_00100	-	proline/betaine transporter
21	 32.65	0	19716..20591	-	291	157826406	-	A1I_00105	-	S-adenosylmethionine transporter
22	 31.44	0	20743..21480	+	245	157826407	-	A1I_00110	-	OmpW family outer-membrane protein
23	 26.98	0	21905..22093	+	62	157826408	-	A1I_00115	-	transposase
24	 32.68	0	22099..22860	+	253	157826409	-	A1I_00120	-	transposase
25	 35.48	+1	22959..24356	+	465	157826410	-	A1I_00125	-	NAD(p) transhydrogenase subunit beta
26	 36.67	+1	24411..24980	+	189	157826411	-	A1I_00130	-	hypothetical protein
27	 28.85	0	25138..25494	-	118	157826412	-	A1I_00135	-	putative colicin V production membrane protein
28	 30.70	0	25875..26444	+	189	157826413	-	A1I_00140	-	hypothetical protein
29	 36.40	+1	26749..27660	+	303	157826414	-	A1I_00145	-	Signal recognition particle-docking protein FtsY
30	 26.67	-1	28699..31131	+	810	157826415	-	A1I_00160	-	hypothetical protein
31	 31.69	0	31206..31874	+	222	157826416	-	A1I_00165	-	hypothetical protein
32	 30.98	0	32335..33651	+	438	157826417	-	A1I_00170	-	folate synthesis bifunctional protein
33	 32.54	0	33660..34163	+	167	157826418	-	A1I_00175	-	dihydrofolate reductase
34	 32.50	0	34181..35263	+	360	157826419	recF	A1I_00180	-	recombination protein F
35	 30.56	0	35581..35724	-	47	157826420	-	A1I_00185	-	hypothetical protein
36	 28.84	0	35905..37038	-	377	157826421	-	A1I_00190	-	TPR repeat-containing protein
37	 34.98	0	37127..38464	-	445	157826422	trmE	A1I_00195	-	tRNA modification GTPase TrmE
38	 32.68	0	38545..39306	-	253	157826423	-	A1I_00200	-	transposase
39	 26.98	0	39312..39500	-	62	157826424	-	A1I_00205	-	transposase
40	 28.07	0	39907..40248	+	113	157826425	-	A1I_00210	-	HicB-like protein
41	 29.35	0	40273..40473	+	66	157826426	-	A1I_00215	-	hypothetical protein
42	 23.91	-1	40760..41194	+	144	157826427	-	A1I_00220	-	hypothetical protein
43	 35.63	+1	41239..42546	+	435	157826428	gltA	A1I_00225	-	type II citrate synthase
44	 37.59	+1	42658..43644	+	328	157826429	obgE	A1I_00230	-	GTPase ObgE
45	 23.68	-1	43704..44273	+	189	157826430	-	A1I_00235	-	hypothetical protein
46	 38.30	+1	45706..46047	+	113	157826431	-	A1I_00250	-	hypothetical protein
47	 27.52	0	46164..47246	-	360	157826432	-	A1I_00255	-	putative permeases
48	 27.43	0	47353..48030	-	225	157826433	-	A1I_00260	-	hypothetical protein
49	 30.46	0	48045..48809	+	254	157826434	-	A1I_00265	-	beta-lactamase superfamily hydrolase
50	 34.99	0	48813..49535	+	240	157826435	-	A1I_00270	-	glutamine ABC transporter ATP-binding protein
51	 32.21	0	49621..50331	+	236	157826436	-	A1I_00275	-	putative aspartyl protease
52	 30.75	0	51765..52229	+	154	157826437	-	A1I_00290	-	putative integral membrane protein
53	 30.88	0	52468..52671	-	67	157826438	-	A1I_00295	-	hypothetical protein
54	 32.39	0	52966..53604	-	212	157826439	-	A1I_00300	-	(di)nucleoside polyphosphate hydrolase-like protein
55	 32.01	0	53588..54496	-	302	157826440	-	A1I_00305	-	hemolysin C
56	 28.80	0	54505..55056	-	183	157826441	-	A1I_00310	-	putative metalloprotease
57	 40.26	+2	55135..56202	-	355	157826442	-	A1I_00315	-	lipoyl synthase
58	 36.58	+1	56195..57457	-	420	157826443	glyA	A1I_00320	-	serine hydroxymethyltransferase
59	 36.42	+1	57618..58361	-	247	157826444	-	A1I_00325	-	Serine esterase
60	 31.93	0	58466..58822	-	118	157826445	-	A1I_00330	-	glutaredoxin-like protein grla
61	 33.49	0	58821..59462	+	213	157826446	-	A1I_00335	-	endonuclease III
62	 38.81	+1	59737..61947	-	736	157826447	-	A1I_00340	-	DNA topoisomerase IV subunit A
63	 35.98	+1	62085..62348	-	87	157826448	-	A1I_00345	-	hypothetical protein
64	 28.82	0	62397..63083	-	228	157826449	-	A1I_00350	-	hypothetical protein
65	 33.97	0	63245..64975	-	576	157826450	argS	A1I_00355	-	arginyl-tRNA synthetase
66	 33.94	0	64985..66136	-	383	157826451	-	A1I_00360	-	deoxyguanosinetriphosphate triphosphohydrolase-like protein
67	 23.02	-1	66328..66618	-	96	157826452	-	A1I_00365	-	endonuclease
68	 34.83	0	66832..67164	+	110	157826453	-	A1I_00370	-	Iron-sulfur cluster assembly accessory protein
69	 32.95	0	67445..68755	-	436	157826454	-	A1I_00375	-	hypothetical protein
70	 32.45	0	69050..69616	+	188	157826455	dcd	A1I_00380	-	deoxycytidine triphosphate deaminase
71	 32.03	0	69749..70207	+	152	157826456	-	A1I_00385	-	preprotein translocase subunit SecB
72	 31.51	0	70439..71152	+	237	157826457	-	A1I_00390	-	transcriptional activator protein CzcR
73	 30.41	0	71325..72146	+	273	157826458	queF	A1I_00395	-	7-cyano-7-deazaguanine reductase
74	 24.89	-1	72668..73141	-	157	157826459	-	A1I_00400	-	F0F1 ATP synthase subunit B
75	 22.78	-1	73144..73617	-	157	157826460	-	A1I_00405	-	F0F1 ATP synthase subunit B'
76	 38.67	+1	73636..73860	-	74	157826461	-	A1I_00410	-	F0F1 ATP synthase subunit C
77	 31.96	0	73893..74621	-	242	157826462	-	A1I_00415	-	F0F1 ATP synthase subunit A
78	 27.27	0	74626..74889	-	87	157826463	-	A1I_00420	-	hypothetical protein
79	 30.33	0	74889..75653	-	254	157826464	-	A1I_00425	-	protein-disulfide isomerase
80	 35.20	0	75840..76376	+	178	157826465	-	A1I_00430	-	transcriptional regulator
81	 35.63	+1	76730..76990	-	86	157826466	-	A1I_00435	-	hypothetical protein
82	 27.74	0	77094..77522	+	142	157826467	-	A1I_00440	-	putative P-loop hydrolase
83	 26.77	-1	77509..79290	-	593	157826468	-	A1I_00445	-	hypothetical protein
84	 36.24	+1	79831..80760	-	309	157826469	tsf	A1I_00450	-	elongation factor Ts
85	 32.19	0	80803..81678	-	291	157826470	rpsB	A1I_00455	-	30S ribosomal protein S2
86	 32.10	0	81954..83330	-	458	157826471	cysS	A1I_00460	-	cysteinyl-tRNA synthetase
87	 28.17	0	83506..86214	+	902	157826472	-	A1I_00465	-	cell surface antigen Sca2
88	 34.01	0	86362..86655	+	97	157826473	rpmB	A1I_00470	-	50S ribosomal protein L28
89	 30.42	0	86652..86891	+	79	157826474	-	A1I_00475	-	50S ribosomal protein L31
90	 30.20	0	87539..88177	+	212	157826475	-	A1I_00480	-	GTPase EngB
91	 27.22	0	88125..89057	+	310	157826476	-	A1I_00485	-	acetylglutamate kinase
92	 32.64	0	89113..89400	+	95	157826477	-	A1I_00490	-	VirB3
93	 35.52	+1	89502..89867	-	121	157826478	-	A1I_00495	-	transposase
94	 27.92	0	89878..90783	+	301	157826479	-	A1I_00500	-	hypothetical protein
95	 29.03	0	90752..92818	+	688	157826480	-	A1I_00505	-	hypothetical protein
96	 29.48	0	92869..93777	-	302	157826481	-	A1I_00510	-	transposase
97	 37.96	+1	93991..94206	-	71	157826482	-	A1I_00515	-	alanyl-tRNA synthetase
98	 25.40	-1	94298..95998	-	566	157826483	-	A1I_00520	-	hypothetical protein
99	 25.53	-1	98755..100266	+	503	157826484	-	A1I_00535	-	hypothetical protein
100	 23.58	-1	100285..100920	+	211	157826485	-	A1I_00540	-	hypothetical protein
31.14	MEAN

4.18	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.