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Shigella flexneri 2a str. 301, complete genome - 1..4607203 4177 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 51.52 0 190..255 + 21 24111451 thrL SF0001 - thr operon leader peptide 2 53.31 0 336..2798 + 820 56479580 thrA SF0002 - bifunctional aspartokinase I/homeserine dehydrogenase I 3 56.27 +1 2800..3732 + 310 24111453 thrB SF0003 - homoserine kinase 4 52.99 0 3733..5019 + 428 24111454 thrC SF0004 - threonine synthase 5 54.86 0 5242..5529 + 95 56479581 - SF0005 - hypothetical protein 6 49.55 0 5682..6458 - 258 24111456 yaaA SF0006 - hypothetical protein 7 50.18 0 8074..8358 + 94 24111457 - SF0008 - hypothetical protein 8 51.78 0 8237..9190 + 317 56479582 talB SF0009 - transaldolase B 9 54.08 0 9305..9892 + 195 56479583 mogA SF0010 - molybdenum cofactor biosynthesis protein 10 53.26 0 9927..10493 - 188 24111460 yaaH SF0011 - hypothetical protein 11 50.56 0 10642..11355 - 237 24111461 - SF0012 - hypothetical protein 12 48.40 0 11381..11785 - 134 24111462 yaaI SF0013 - hypothetical protein 13 51.17 0 12162..14078 + 638 24111463 dnaK SF0014 - molecular chaperone DnaK 14 55.08 0 14167..15297 + 376 56479584 dnaJ SF0015 - chaperone protein DnaJ 15 51.24 0 16140..17306 + 388 24111465 nhaA SF0016 - pH-dependent sodium/proton antiporter 16 47.44 0 17372..18271 + 299 56479585 nhaR SF0017 - transcriptional activator NhaR 17 52.02 0 18684..19079 - 131 24111467 insB SF0018 - IS1 ORF2 18 52.90 0 19106..19381 - 91 24111468 insA SF0019 - IS1 ORF1 19 46.97 -1 19770..20033 - 87 161485775 rpsT SF0020 - 30S ribosomal protein S20 20 52.97 0 20362..21303 + 313 24111470 ribF SF0021 - bifunctional riboflavin kinase/FMN adenylyltransferase 21 55.70 +1 21346..24162 + 938 24111471 ileS SF0022 - isoleucyl-tRNA synthetase 22 53.74 0 24162..24656 + 164 24111472 lspA SF0023 - lipoprotein signal peptidase 23 54.89 0 24749..25198 - 149 24111473 slpA SF0024 - FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) 24 54.89 0 25256..25705 + 149 24111474 slpA SF0025 - FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) 25 55.10 0 25707..26657 + 316 56479587 ispH SF0026 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 26 55.74 +1 26723..27637 + 304 24111476 yaaF SF0027 - ribonucleoside hydrolase RihC 27 53.04 0 27804..28625 + 273 24111477 dapB SF0028 - dihydrodipicolinate reductase 28 53.44 0 29081..30229 + 382 56479588 carA SF0029 - carbamoyl phosphate synthase small subunit 29 55.71 +1 30247..33468 + 1073 24111479 carB SF0030 - carbamoyl phosphate synthase large subunit 30 45.96 -1 33730..34125 + 131 161485952 caiF SF0031 - DNA-binding transcriptional activator CaiF 31 54.41 0 34211..34822 - 203 24111481 caiE SF0032 - carnitine operon protein CaiE 32 52.46 0 34807..35700 - 297 24111482 caiD SF0033 - carnitinyl-CoA dehydratase 33 50.73 0 35701..37269 - 522 24111483 caiC SF0034 - putative crotonobetaine/carnitine-CoA ligase 34 52.46 0 37328..38545 - 405 24111484 caiB SF0035 - crotonobetainyl-CoA:carnitine CoA-transferase 35 53.89 0 38674..39816 - 380 24111485 caiA SF0036 - crotonobetainyl-CoA dehydrogenase 36 52.21 0 39847..41361 - 504 24111486 caiT SF0037 - L-carnitine/gamma-butyrobetaine antiporter 37 52.66 0 41717..42487 + 256 161485776 fixA SF0038 - putative electron transfer flavoprotein FixA 38 57.07 +1 42502..43293 + 263 24111488 - SF0039 - putative electron transfer flavoprotein subunit alpha 39 55.17 0 43494..44780 + 428 24111489 fixC SF0040 - putative oxidoreductase FixC 40 56.60 +1 44777..45064 + 95 24111490 fixX SF0041 - putative ferredoxin 41 52.26 0 45123..46517 + 464 24111491 yaaU SF0042 - putative transport protein 42 55.37 0 46565..47095 + 176 24111492 yabF SF0043 - glutathione-regulated potassium-efflux system ancillary protein KefF 43 55.29 0 47088..48950 + 620 24111493 kefC SF0044 - glutathione-regulated potassium-efflux system protein KefC 44 52.92 0 49141..49620 + 159 56479590 folA SF0045 - dihydrofolate reductase 45 55.99 +1 49698..50540 - 280 24111495 apaH SF0046 - diadenosine tetraphosphatase 46 51.85 0 50547..50924 - 125 24111496 apaG SF0047 - ApaG 47 53.41 0 50927..51748 - 273 24111497 ksgA SF0048 - dimethyladenosine transferase 48 56.26 +1 51745..52734 - 329 24111498 pdxA SF0049 - 4-hydroxythreonine-4-phosphate dehydrogenase 49 53.85 0 52734..54020 - 428 24111499 surA SF0050 - peptidyl-prolyl cis-trans isomerase SurA 50 51.38 0 54073..56427 - 784 24111500 imp SF0051 - organic solvent tolerance protein 51 52.94 0 56682..57497 + 271 56479591 djlA SF0052 - DNA-J like membrane chaperone protein 52 54.88 0 57645..58331 - 228 24111502 yabO SF0053 - hypothetical protein 53 54.90 0 58286..61192 - 968 24111503 hepA SF0054 - ATP-dependent helicase HepA 54 55.19 0 61357..63708 - 783 24111504 polB SF0055 - DNA polymerase II 55 55.17 0 63783..64478 - 231 24111505 araD SF0056 - L-ribulose-5-phosphate 4-epimerase 56 58.08 +1 66190..67890 - 566 24111506 araB SF0058 - ribulokinase 57 52.67 0 68229..69107 + 292 56479592 araC SF0059 - DNA-binding transcriptional regulator AraC 58 54.51 0 69193..69957 + 254 24111508 yabI SF0060 - hypothetical protein 59 57.22 +1 70071..70769 - 232 56479593 thiQ SF0061 - thiamine transporter ATP-binding subunit 60 58.54 +1 70753..72363 - 536 24111510 thiP SF0062 - thiamine transporter membrane protein 61 52.74 0 72339..73322 - 327 56479594 tbpA SF0063 - thiamine transporter substrate binding subunit 62 55.19 0 73486..75141 - 551 56479595 yabN SF0064 - transcriptional regulator SgrR 63 48.09 0 75463..76641 + 392 24111513 yabM SF0065 - putative transport protein 64 52.15 0 76690..77295 - 201 24111514 leuD SF0066 - isopropylmalate isomerase small subunit 65 55.32 0 77306..78706 - 466 24111515 leuC SF0067 - isopropylmalate isomerase large subunit 66 55.22 0 78709..79800 - 363 161485951 leuB SF0068 - 3-isopropylmalate dehydrogenase 67 52.74 0 79800..81371 - 523 24111517 leuA SF0069 - 2-isopropylmalate synthase 68 47.13 -1 81464..81550 - 28 24111518 leuL SF0070 - leu operon leader peptide 69 45.71 -1 82209..83153 + 314 161485950 leuO SF0071 - leucine transcriptional activator 70 52.81 0 83471..85195 + 574 161485777 ilvI SF0072 - acetolactate synthase 3 catalytic subunit 71 50.20 0 85198..85689 + 163 56479597 ilvH SF0073 - acetolactate synthase 3 regulatory subunit 72 47.13 -1 85701..85787 + 28 24111522 fruL SF0074 - fruR leader peptide 73 54.93 0 85869..86873 + 334 24111523 fruR SF0075 - DNA-binding transcriptional regulator FruR 74 52.90 0 86996..87271 + 91 24111524 insA SF0076 - IS1 ORF1 75 52.27 0 87298..87693 + 131 24111525 insB SF0077 - IS1 ORF2 76 52.07 0 88252..88710 + 152 56479598 yabB SF0078 - cell division protein MraZ 77 55.20 0 88712..89653 + 313 24111527 mraW SF0079 - S-adenosyl-methyltransferase MraW 78 50.55 0 89650..90015 + 121 24111528 ftsL SF0080 - cell division protein FtsL 79 53.82 0 90031..91797 + 588 24111529 ftsI SF0081 - penicillin-binding protein 3; peptidoglycan synthetase 80 56.79 +1 91784..93271 + 495 24111530 murE SF0082 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 81 54.82 0 93268..94626 + 452 24111531 murF SF0083 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 82 52.82 0 94620..95702 + 360 24111532 mraY SF0084 - phospho-N-acetylmuramoyl-pentapeptide-transferase 83 55.28 0 95705..97021 + 438 24111533 murD SF0085 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 84 52.53 0 97021..98265 + 414 56479599 ftsW SF0086 - cell division protein FtsW 85 55.71 +1 98262..99329 + 355 24111535 murG SF0087 - N-acetylglucosaminyl transferase 86 54.40 0 99383..100858 + 491 24111536 murC SF0088 - UDP-N-acetylmuramate--L-alanine ligase 87 51.47 0 100851..101771 + 306 24111537 ddl SF0089 - D-alanine--D-alanine ligase 88 53.31 0 101773..102603 + 276 24111538 ftsQ SF0090 - cell division protein FtsQ 89 52.02 0 102600..103862 + 420 24111539 ftsA SF0091 - cell division protein FtsA 90 54.17 0 103923..105074 + 383 56479600 ftsZ SF0092 - cell division protein FtsZ 91 51.20 0 105175..106092 + 305 24111541 lpxC SF0093 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 92 54.00 0 106323..106835 + 170 161485778 yacA SF0094 - SecA regulator SecM 93 52.25 0 106897..109602 + 901 24111543 secA SF0095 - preprotein translocase subunit SecA 94 49.23 0 109662..110051 + 129 24111544 mutT SF0096 - nucleoside triphosphate pyrophosphohydrolase 95 54.81 0 110066..110200 - 44 24111545 - SF0097 - hypothetical protein 96 52.02 0 110151..110348 - 65 24111546 yacG SF0098 - zinc-binding protein 97 51.21 0 110358..111101 - 247 24111547 yacF SF0099 - hypothetical protein 98 52.33 0 111101..111721 - 206 24111548 coaE SF0100 - dephospho-CoA kinase 99 51.72 0 111946..112989 + 347 24111549 guaC SF0101 - guanosine 5'-monophosphate oxidoreductase 100 51.85 0 112909..113016 - 35 24111550 - SF0102 - hypothetical protein 51.36 MEAN 4.22 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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