IslandPath Analysis: Arthrobacter sp. FB24



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 65.58   STD DEV: 3.19
Arthrobacter sp. FB24 chromosome 1, complete sequence - 1..4698945
4146 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 61.61	-1	5..1429	+	474	116668569	-	Arth_0001	-	chromosomal replication initiator protein DnaA
2	 63.73	0	1965..3089	+	374	116668570	-	Arth_0002	-	DNA polymerase III, beta subunit
3	 64.75	0	3140..4024	+	294	116668571	-	Arth_0003	-	6-phosphogluconate dehydrogenase-like protein
4	 64.68	0	4061..5266	+	401	116668572	recF	Arth_0004	-	recombination protein F
5	 69.53	+1	5263..5820	+	185	116668573	-	Arth_0005	-	hypothetical protein
6	 62.51	0	6234..8324	+	696	116668574	gyrB	Arth_0006	-	DNA gyrase subunit B
7	 64.23	0	8391..11099	+	902	116668575	-	Arth_0007	-	DNA gyrase subunit A
8	 68.36	0	11096..11743	+	215	116668576	-	Arth_0008	-	hypothetical protein
9	 68.52	0	12369..13283	+	304	116668577	-	Arth_0009	-	hypothetical protein
10	 61.35	-1	13332..14159	-	275	116668578	-	Arth_0010	-	glycosyl transferase family protein
11	 65.40	0	14339..15286	-	315	116668579	-	Arth_0011	-	hypothetical protein
12	 60.44	-1	15442..15987	+	181	116668580	-	Arth_0012	-	peptidylprolyl isomerase
13	 65.65	0	15994..16875	+	293	116668581	-	Arth_0013	-	rhomboid family protein
14	 65.69	0	17898..18509	-	203	116668582	-	Arth_0014	-	DNA-3-methyladenine glycosylase I
15	 62.94	0	18661..20943	+	760	116668583	-	Arth_0015	-	peptidase M6, immune inhibitor A
16	 59.61	-1	21064..21318	-	84	116668584	-	Arth_0016	-	hypothetical protein
17	 64.42	0	21495..22295	+	266	116668585	-	Arth_0017	-	sortase family protein
18	 54.97	-2	22300..22470	+	56	116668586	-	Arth_0018	-	hypothetical protein
19	 64.80	0	22467..23108	+	213	116668587	-	Arth_0019	-	anthranilate synthase, component II
20	 66.09	0	23164..25062	-	632	116668588	-	Arth_0020	-	serine/threonine protein kinase
21	 66.99	0	25119..26951	-	610	116668589	-	Arth_0021	-	serine/threonine protein kinase
22	 63.86	0	26948..28408	-	486	116668590	-	Arth_0022	-	peptidoglycan glycosyltransferase
23	 63.24	0	28405..29865	-	486	116668591	-	Arth_0023	-	cell cycle protein
24	 67.02	0	29862..31538	-	558	116668592	-	Arth_0024	-	protein serine/threonine phosphatases
25	 65.01	0	31541..32023	-	160	116668593	-	Arth_0025	-	FHA domain-containing protein
26	 65.19	0	32020..32766	-	248	116668594	-	Arth_0026	-	FHA domain-containing protein
27	 62.84	0	33439..34536	+	365	116668595	-	Arth_0027	-	twin-arginine translocation pathway signal
28	 66.06	0	34551..35372	+	273	116668596	-	Arth_0028	-	ABC transporter related
29	 67.97	0	35369..36211	+	280	116668597	-	Arth_0029	-	binding-protein-dependent transport systems inner membrane component
30	 64.60	0	36208..37029	+	273	116668598	-	Arth_0030	-	binding-protein-dependent transport systems inner membrane component
31	 68.11	0	37262..37954	-	230	116668599	-	Arth_0031	-	GntR family transcriptional regulator
32	 65.96	0	37965..39092	-	375	116668600	-	Arth_0032	-	mandelate racemase/muconate lactonizing protein
33	 63.76	0	39379..40515	+	378	116668601	-	Arth_0033	-	hypothetical protein
34	 65.48	0	40672..41511	-	279	116668602	-	Arth_0034	-	auxin efflux carrier
35	 64.71	0	41618..42178	-	186	116668603	-	Arth_0035	-	glucarate dehydratase
36	 69.14	+1	42175..43791	-	538	116668604	-	Arth_0036	-	aldehyde dehydrogenase
37	 65.79	0	43818..44732	-	304	116668605	-	Arth_0037	-	5-dehydro-4-deoxyglucarate dehydratase
38	 62.26	-1	44887..45771	-	294	116668606	-	Arth_0038	-	LysR family transcriptional regulator
39	 67.38	0	45774..46475	-	233	116668607	-	Arth_0039	-	transcriptional regulator
40	 66.16	0	46617..48005	+	462	116668608	-	Arth_0040	-	putrescine oxidase
41	 67.41	0	48039..48974	+	311	116668609	-	Arth_0041	-	UspA domain-containing protein
42	 62.99	0	48971..50494	+	507	116668610	-	Arth_0042	-	amino acid permease-associated region
43	 61.08	-1	50607..51089	+	160	116668611	-	Arth_0043	-	pyridoxamine 5'-phosphate oxidase-related, FMN-binding
44	 65.18	0	51093..51698	-	201	116668612	-	Arth_0044	-	hypothetical protein
45	 69.23	+1	51815..52399	-	194	116668613	-	Arth_0045	-	hypothetical protein
46	 62.31	-1	52560..52949	+	129	116668614	-	Arth_0046	-	glyoxalase/bleomycin resistance protein/dioxygenase
47	 59.44	-1	53021..53200	+	59	116668615	-	Arth_0047	-	phage shock protein C, PspC
48	 62.06	-1	53340..54881	+	513	116668616	-	Arth_0048	-	extracellular solute-binding protein
49	 63.06	0	54965..55852	+	295	116668617	-	Arth_0049	-	binding-protein-dependent transport systems inner membrane component
50	 64.38	0	55945..56862	+	305	116668618	-	Arth_0050	-	binding-protein-dependent transport systems inner membrane component
51	 58.96	-2	56890..58290	+	466	116668619	-	Arth_0051	-	inulin fructotransferase (DFA-I-forming)
52	 64.02	0	58307..59401	+	364	116668620	-	Arth_0052	-	LacI family transcription regulator
53	 63.84	0	59448..60401	+	317	116668621	-	Arth_0053	-	ribokinase-like domain-containing protein
54	 64.00	0	60394..61929	+	511	116668622	-	Arth_0054	-	levanase
55	 69.05	+1	62031..62912	+	293	116668623	-	Arth_0055	-	hypothetical protein
56	 67.63	0	62899..63519	-	206	116668624	-	Arth_0056	-	thymidylate kinase
57	 66.46	0	63699..64178	+	159	116668625	-	Arth_0057	-	hypothetical protein
58	 67.41	0	64191..64595	-	134	116668626	-	Arth_0058	-	hypothetical protein
59	 65.16	0	64750..65478	+	242	116668627	-	Arth_0059	-	LysR family transcriptional regulator
60	 69.05	+1	65482..65817	-	111	116668628	-	Arth_0060	-	hypothetical protein
61	 66.74	0	66335..67762	+	475	116668629	-	Arth_0061	-	L-serine dehydratase 1
62	 64.78	0	67852..68859	+	335	116668630	-	Arth_0062	-	lipoyl synthase
63	 66.56	0	68887..69795	+	302	116668631	-	Arth_0063	-	methylenetetrahydrofolate reductase
64	 62.16	-1	69807..70139	+	110	116668632	-	Arth_0064	-	hypothetical protein
65	 67.29	0	70217..71020	+	267	116668633	-	Arth_0065	-	membrane-bound lytic murein transglycosylase B-like protein
66	 63.44	0	71060..71989	+	309	116668634	-	Arth_0066	-	alcohol dehydrogenase
67	 66.82	0	72076..72747	+	223	116668635	-	Arth_0067	-	hypothetical protein
68	 65.42	0	72805..73527	-	240	116668636	-	Arth_0068	-	short-chain dehydrogenase/reductase SDR
69	 69.19	+1	73586..74179	+	197	116668637	-	Arth_0069	-	broad-specificity phosphatase PhoE
70	 65.71	0	74187..74918	-	243	116668638	-	Arth_0070	-	hypothetical protein
71	 70.05	+1	75055..75498	-	147	116668639	-	Arth_0071	-	hexapaptide repeat-containing transferase
72	 69.94	+1	75671..76555	+	294	116668640	-	Arth_0072	-	GDSL family lipase
73	 68.39	0	76881..77228	-	115	116668641	-	Arth_0073	-	hypothetical protein
74	 67.16	0	77231..77632	-	133	116668642	-	Arth_0074	-	hypothetical protein
75	 70.59	+1	77700..78107	-	135	116668643	-	Arth_0075	-	hypothetical protein
76	 65.77	0	78291..78845	+	184	116668644	-	Arth_0076	-	isochorismatase hydrolase
77	 69.57	+1	78923..80023	+	366	116668645	-	Arth_0077	-	sarcosine oxidase
78	 71.92	+1	80080..80631	+	183	116668646	-	Arth_0078	-	hypothetical protein
79	 65.44	0	80789..81442	+	217	116668647	-	Arth_0079	-	membrane protein
80	 69.63	+1	81454..82431	-	325	116668648	-	Arth_0080	-	LacI family transcription regulator
81	 66.76	0	82645..83715	+	356	116668649	-	Arth_0081	-	purine nucleosidase
82	 66.11	0	83716..85140	+	474	116668650	-	Arth_0082	-	major facilitator transporter
83	 70.46	+1	85137..86111	+	324	116668651	-	Arth_0083	-	ribokinase-like domain-containing protein
84	 65.86	0	86108..87220	-	370	116668652	-	Arth_0084	-	oxidoreductase domain-containing protein
85	 63.38	0	87205..87903	-	232	116668653	-	Arth_0085	-	hypothetical protein
86	 67.56	0	87953..88957	-	334	116668654	-	Arth_0086	-	xylose isomerase domain-containing protein
87	 67.76	0	88985..90178	-	397	116668655	-	Arth_0087	-	oxidoreductase domain-containing protein
88	 60.29	-1	90207..91022	-	271	116668656	-	Arth_0088	-	binding-protein-dependent transport systems inner membrane component
89	 60.17	-1	91115..92053	-	312	116668657	-	Arth_0089	-	binding-protein-dependent transport systems inner membrane component
90	 59.58	-1	92050..93375	-	441	116668658	-	Arth_0090	-	extracellular solute-binding protein
91	 65.42	0	93605..94645	+	346	116668659	-	Arth_0091	-	LacI family transcription regulator
92	 68.35	0	94706..95416	-	236	116668660	-	Arth_0092	-	GntR family transcriptional regulator
93	 67.19	0	95523..96281	+	252	116668661	-	Arth_0093	-	LamB/YcsF family protein
94	 67.42	0	96387..97718	+	443	116668662	-	Arth_0094	-	major facilitator transporter
95	 70.68	+1	97771..99438	+	555	116668663	-	Arth_0095	-	urea amidolyase related protein
96	 70.01	+1	99447..101210	+	587	116668664	-	Arth_0096	-	carbamoyl-phosphate synthase L chain, ATP-binding
97	 63.69	0	101361..101864	-	167	116668665	-	Arth_0097	-	hypothetical protein
98	 65.57	0	101942..102307	-	121	116668666	-	Arth_0098	-	ArsR family transcriptional regulator
99	 63.43	0	102640..102855	+	71	116668667	-	Arth_0099	-	hypothetical protein
100	 65.43	0	102861..103586	+	241	116668668	-	Arth_0100	-	response regulator receiver/ANTAR domain-containing protein
65.58	MEAN

3.19	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.