version 1.0
Campylobacter concisus 13826, complete genome - 1..2052007 1929 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 38.83 0 1..1311 + 436 157165209 dnaA CCC13826_1853 - chromosomal replication initiation protein 2 28.57 -2 1319..1465 + 48 157164664 - CCC13826_1852 - hypothetical protein 3 32.96 -1 1465..2532 + 355 157164122 dnaN CCC13826_1851 - DNA polymerase III subunit beta 4 40.87 0 2550..4859 + 769 157165358 gyrB CCC13826_1850 - DNA gyrase subunit B 5 38.69 0 4878..5474 + 198 157165026 - CCC13826_1849 - response regulator 6 39.97 0 5474..6709 + 411 157164264 - CCC13826_1848 - hypothetical protein 7 37.01 0 6907..7341 + 144 157163969 - CCC13826_1847 - hypothetical protein 8 38.57 0 7624..8043 - 139 157165170 - CCC13826_1846 - RDD family protein 9 41.82 0 8045..8209 - 54 157164618 - CCC13826_1845 - hypothetical protein 10 46.44 +1 8277..9260 - 327 157164168 purM CCC13826_1844 - phosphoribosylaminoimidazole synthetase 11 38.97 0 9340..9942 + 200 157164538 coaE CCC13826_1842 - dephospho-CoA kinase 12 39.29 0 9932..10552 - 206 157165577 thiD CCC13826_1843 - phosphomethylpyrimidine kinase 13 45.43 +1 10628..11371 + 247 157163987 dapF CCC13826_1841 - diaminopimelate epimerase 14 37.54 0 11782..12138 - 118 157163866 rplT CCC13826_1840 - 50S ribosomal protein L20 15 42.19 0 12237..12428 - 63 157165502 rpmI CCC13826_1839 - 50S ribosomal protein L35 16 42.75 0 12630..14126 + 498 157165243 - CCC13826_1838 - S-layer-RTX protein 17 35.71 0 14162..14287 - 41 157164406 - CCC13826_2207 - hypothetical protein 18 40.00 0 14345..14494 + 49 157164597 amyH CCC13826_1837 - large repetitive protein 19 38.56 0 16954..17412 + 152 157165050 - CCC13826_1835 - hypothetical protein 20 46.44 +1 17417..18301 + 294 157165493 - CCC13826_1834 - putative DNA-binding protein II 21 41.99 0 19366..20070 - 234 157165304 - CCC13826_1831 - NapC/NirT cytochrome c family, N- region 22 44.14 0 20067..20501 - 144 157164892 - CCC13826_1830 - flavocytochrome c heme subunit 23 45.45 +1 22403..23821 - 472 157164089 azlD CCC13826_1827 - branched-chain amino acid transport protein 24 38.95 0 23910..24425 - 171 157164496 - CCC13826_1826 - hypothetical protein 25 44.56 +1 24466..25650 - 394 157165173 - CCC13826_1825 - recombination factor protein RarA 26 43.31 0 25653..26183 - 176 157164605 - CCC13826_1824 - hypothetical protein 27 39.12 0 26263..26556 + 97 157165279 - CCC13826_1823 - hypothetical protein 28 44.73 +1 26558..27250 - 230 157165679 ung CCC13826_1822 - uracil-DNA glycosylase 29 43.58 0 27313..27888 + 191 157164521 - CCC13826_1821 - YbaK/prolyl-tRNA synthetases associated domain-containing protein 30 22.50 -2 28111..28230 - 39 157164817 - CCC13826_1820 - hypothetical protein 31 44.43 0 28230..30050 + 606 157165430 thrS CCC13826_1819 - threonyl-tRNA synthetase 32 43.37 0 30068..30565 + 165 157164257 infC CCC13826_1818 - translation initiation factor IF-3 33 40.32 0 31050..31235 - 61 157164795 - CCC13826_1817 - hypothetical protein 34 38.67 0 31250..31474 + 74 157165132 - CCC13826_1816 - multifunctional CCA protein 35 50.04 +2 31623..32981 - 452 157163997 - CCC13826_1815 - glutamate dehydrogenase 36 44.68 +1 33151..33723 - 190 157164219 - CCC13826_1814 - endonuclease/exonuclease/phosphatase 37 45.38 +1 33823..34752 + 309 157165636 - CCC13826_1813 - PQQ repeat-containing protein 38 45.97 +1 34793..36232 - 479 157165069 - CCC13826_1812 - acetyl-CoA carboxylase 39 40.84 0 36349..36894 - 181 157164444 - CCC13826_1811 - hypothetical protein 40 36.64 0 37348..37710 - 120 157165440 - CCC13826_1809 - TM2 41 39.29 0 37700..38152 - 150 157165011 lspA CCC13826_1808 - lipoprotein signal peptidase 42 42.88 0 38145..39485 - 446 157164280 glmM CCC13826_1807 - phosphoglucosamine mutase 43 37.41 0 39643..39912 + 89 157165436 rpsT CCC13826_1806 - 30S ribosomal protein S20 44 43.63 0 39927..40994 + 355 157165147 prfA CCC13826_1805 - peptide chain release factor 1 45 38.57 0 41306..41725 + 139 157164064 - CCC13826_1804 - ModE family transcriptional regulator 46 46.55 +1 42087..43652 + 521 157164095 - CCC13826_1803 - FAD binding domain-containing protein 47 32.48 -1 43679..43912 - 77 157165631 - CCC13826_1802 - hypothetical protein 48 40.71 0 43903..44268 - 121 157165215 - CCC13826_1801 - diacylglycerol kinase (dagk; diglyceride kinase; dgk) 49 45.59 +1 44323..45081 + 252 157164085 xth CCC13826_1799 - exodeoxyribonuclease III 50 41.58 0 45078..45635 - 185 157164761 ftsI CCC13826_1800 - cell division protein 51 42.80 0 45744..46493 + 249 157165387 - CCC13826_1798 - hypothetical protein 52 43.00 0 46490..47368 + 292 157164508 - CCC13826_1796 - permeases of the drug/metabolite transporter 53 40.63 0 47365..48090 - 241 157165657 flgB CCC13826_1797 - flagellar basal-body rod protein 54 45.04 +1 48137..48529 + 130 157165152 - CCC13826_1794 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 55 40.00 0 48520..48894 - 124 157164717 - CCC13826_1795 - SsrA-binding protein 56 43.56 0 49025..49933 + 302 157165776 - CCC13826_1793 - putative carbon storage regulator-like protein 57 40.36 0 49936..51429 + 497 157164262 - CCC13826_1792 - tRNA pseudouridine synthase B 58 39.59 0 51426..52208 + 260 157164968 pcrA CCC13826_1791 - ATP-dependent DNA helicase PcrA 59 43.37 0 52218..53024 + 268 157164381 pepF CCC13826_1789 - oligoendopeptidase F 60 44.82 +1 53005..54336 - 443 157163861 - CCC13826_1790 - hypothetical protein 61 43.80 0 54736..55461 - 241 157165761 - CCC13826_1787 - S-adenosylmethionine synthetase (methionineadenosyltransferase; AdoMet synthetase; MAT) 62 40.61 0 55454..56044 - 196 157165734 purN CCC13826_1786 - phosphoribosylglycinamide formyltransferase 63 45.16 +1 56026..57429 - 467 157164112 - CCC13826_1785 - preprotein translocase, YajC subunit 64 44.95 +1 57431..58936 - 501 157164155 - CCC13826_1784 - putative Mg chelatase-like protein 65 38.54 0 58933..59451 - 172 157165463 def CCC13826_1783 - peptide deformylase 66 41.62 0 59453..60490 - 345 157165307 - CCC13826_1782 - diguanylate cyclase 67 42.30 0 60499..61089 - 196 157164595 clpP CCC13826_1781 - ATP-dependent Clp protease proteolytic subunit 68 40.02 0 61089..62420 - 443 157165093 tig CCC13826_1780 - trigger factor 69 25.45 -2 62410..62574 + 54 157164771 - CCC13826_1779 - GGDEF domain-containing protein 70 45.55 +1 62558..63130 + 190 157164234 folE CCC13826_1778 - GTP cyclohydrolase I 71 49.77 +2 63127..64434 + 435 157163914 fliI CCC13826_1777 - flagellum-specific ATP synthase 72 30.93 -1 64467..65132 - 221 157165541 - CCC13826_1776 - ATPase 73 33.61 -1 65129..66202 - 357 157164868 - CCC13826_1775 - endonuclease III 74 39.70 0 66218..67960 - 580 157164483 cysK CCC13826_1774 - cysteine synthase A 75 42.57 0 67960..69627 - 555 157164072 cysE CCC13826_1773 - acyl-CoA synthetase 76 42.83 0 69636..70877 - 413 157165373 - CCC13826_1772 - outer membrane protein transport protein (ompp1/fadl/todx) 77 31.00 -1 71722..72192 - 156 157164416 - CCC13826_1105 - hypothetical protein 78 37.97 0 72544..74961 - 805 157163903 - CCC13826_1107 - mechanosensitive ion channel family protein 79 37.62 0 74954..75817 - 287 157165555 - CCC13826_1108 - cytochrome c551 peroxidase (cytochrome cperoxidase; CCP) 80 37.66 0 75965..76426 + 153 157164654 - CCC13826_1109 - hypothetical protein 81 38.22 0 76552..77022 + 156 157165742 - CCC13826_1110 - N-terminal methylation domain-containing protein 82 17.46 -2 77673..77798 + 41 157165251 - CCC13826_1116 - putative ABC transport system periplasmic substrate-binding protein 83 31.88 -1 78363..78500 + 45 157164631 - CCC13826_1117 - ABC transporter ATP-binding protein 84 36.67 0 78666..78785 - 39 157164947 - CCC13826_2215 - hypothetical protein 85 35.19 0 78775..78936 - 53 157165370 - CCC13826_1118 - hypothetical protein 86 45.50 +1 79367..81808 - 813 157164059 - CCC13826_1119 - hypothetical protein 87 41.40 0 81829..82398 - 189 157163976 - CCC13826_1120 - putative cytochrome c-type haem-binding periplasmic protein 88 42.80 0 84172..84879 - 235 157165774 - CCC13826_1122 - flagellar basal body rod modification protein 89 39.40 0 84888..86288 - 466 157164274 hydD CCC13826_1123 - quinone-reactive Ni/Fe hydrogenase 90 46.70 +1 86450..88252 + 600 157165061 typA CCC13826_1124 - GTP-binding protein TypA/BipA 91 30.41 -1 88335..88505 - 56 157165446 hydB CCC13826_1125 - quinone-reactive Ni/Fe hydrogenase, large subunit 92 28.68 -1 88800..88928 - 42 157164248 hydA CCC13826_1126 - quinone-reactive Ni/Fe hydrogenase, small subunit 93 38.30 0 89151..89573 - 140 157165549 - CCC13826_1127 - hypothetical protein 94 47.29 +1 89551..90453 - 300 157165095 - CCC13826_1128 - phosphate acetyltransferase (phosphotransacetylase) 95 47.05 +1 90459..91136 - 225 157164788 - CCC13826_1129 - lipoprotein 96 42.47 0 91126..91530 - 134 157164365 xerC CCC13826_1130 - integrase/recombinase 97 44.39 0 91515..92183 - 222 157165672 - CCC13826_1131 - curli production assembly/transport component CsgG subfamily protein 98 46.16 +1 92228..93568 - 446 157165272 - CCC13826_1132 - mate efflux family protein 99 43.85 0 93720..94499 + 259 157164998 - CCC13826_1133 - putative CoA-substrate-specific enzyme activase, putative 100 46.20 +1 94486..95643 + 385 157164669 murF CCC13826_1134 - UDP-MurNac-pentapeptide presynthetase 39.18 MEAN 5.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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