IslandPath Analysis: Staphylococcus aureus subsp. aureus NCTC 8325



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.73   STD DEV: 3.85
Staphylococcus aureus subsp. aureus NCTC 8325, complete genome - 1..2821361
2892 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 32.89	0	517..1878	+	453	88193824	dnaA	SAOUHSC_00001	-	chromosomal replication initiation protein
2	 32.80	0	2156..3289	+	377	88193825	-	SAOUHSC_00002	-	DNA polymerase III subunit beta
3	 35.37	0	3670..3915	+	81	88193826	-	SAOUHSC_00003	-	hypothetical protein
4	 33.78	0	3912..5024	+	370	88193827	recF	SAOUHSC_00004	-	recombination protein F
5	 37.00	+1	5034..6968	+	644	88193828	-	SAOUHSC_00005	-	DNA gyrase, B subunit
6	 36.94	+1	7005..9668	+	887	88193829	-	SAOUHSC_00006	-	DNA gyrase, A subunit
7	 37.75	+1	9755..10456	-	233	88193830	-	SAOUHSC_00007	-	hypothetical protein
8	 36.90	+1	10893..12407	+	504	88193831	-	SAOUHSC_00008	-	histidine ammonia-lyase
9	 34.58	0	12786..14072	+	428	88193832	-	SAOUHSC_00009	-	seryl-tRNA synthetase
10	 37.07	+1	14722..15417	+	231	88193833	-	SAOUHSC_00010	-	hypothetical protein
11	 34.55	0	15414..15743	+	109	88193834	-	SAOUHSC_00012	-	hypothetical protein
12	 35.60	0	16106..17074	+	322	88193835	-	SAOUHSC_00013	-	hypothetical protein
13	 33.12	0	17365..18303	+	312	88193836	-	SAOUHSC_00014	-	hypothetical protein
14	 35.77	0	18318..20285	+	655	88193837	-	SAOUHSC_00015	-	hypothetical protein
15	 31.79	0	20282..20734	+	150	88193838	rplI	SAOUHSC_00017	-	50S ribosomal protein L9
16	 38.26	+1	20766..22166	+	466	88193839	-	SAOUHSC_00018	-	replicative DNA helicase
17	 36.37	0	22444..23727	+	427	88193840	-	SAOUHSC_00019	-	adenylosuccinate synthetase
18	 36.47	0	24931..25632	+	233	88193841	-	SAOUHSC_00020	-	two-component response regulator, putative
19	 34.87	0	25645..27471	+	608	88193842	-	SAOUHSC_00021	-	sensory box histidine kinase VicK, putative
20	 34.89	0	27515..28798	+	427	88193843	-	SAOUHSC_00022	-	hypothetical protein
21	 32.32	0	28799..29587	+	262	88193844	-	SAOUHSC_00023	-	hypothetical protein
22	 35.71	0	29977..30777	+	266	88193845	-	SAOUHSC_00024	-	hypothetical protein
23	 38.68	+1	31005..33323	+	772	88193846	-	SAOUHSC_00025	-	hypothetical protein
24	 37.71	+1	33555..34034	-	159	88193847	-	SAOUHSC_00026	-	hypothetical protein
25	 39.79	+1	33691..34170	+	159	88193848	-	SAOUHSC_00027	-	hypothetical protein
26	 22.22	-2	34375..34509	-	44	88193849	-	SAOUHSC_00028	-	hypothetical protein
27	 21.51	-2	34473..34565	+	30	88193850	-	SAOUHSC_00029	-	hypothetical protein
28	 25.54	-1	34712..36457	+	581	88193851	-	SAOUHSC_00030	-	hypothetical protein
29	 35.32	0	36551..37003	-	150	88193852	-	SAOUHSC_00031	-	hypothetical protein
30	 20.59	-2	37019..37120	-	33	88193853	-	SAOUHSC_00032	-	hypothetical protein
31	 31.61	0	37218..37973	-	251	88193854	-	SAOUHSC_00033	-	hypothetical protein
32	 31.03	0	37973..38233	-	86	88193855	-	SAOUHSC_00034	-	hypothetical protein
33	 31.84	0	38370..39437	+	355	88193856	-	SAOUHSC_00035	-	hypothetical protein
34	 33.63	0	39468..40802	+	444	88193857	-	SAOUHSC_00036	-	hypothetical protein
35	 32.58	0	40821..42014	+	397	88193858	-	SAOUHSC_00037	-	hypothetical protein
36	 31.37	0	42281..42382	-	33	88193859	-	SAOUHSC_00038	-	hypothetical protein
37	 39.23	+1	42681..43613	-	310	88193860	-	SAOUHSC_00039	-	hypothetical protein
38	 26.47	-1	43976..44179	+	67	88193861	-	SAOUHSC_00040	-	hypothetical protein
39	 31.65	0	44228..44524	+	98	88193862	-	SAOUHSC_00041	-	hypothetical protein
40	 28.99	0	44596..45816	-	406	88193863	-	SAOUHSC_00042	-	hypothetical protein
41	 31.16	0	45809..46360	-	183	88193864	-	SAOUHSC_00043	-	hypothetical protein
42	 27.53	-1	46473..47333	+	286	88193865	-	SAOUHSC_00044	-	hypothetical protein
43	 26.22	-1	47689..48222	-	177	88193866	-	SAOUHSC_00045	-	hypothetical protein
44	 26.21	-1	48313..49056	+	247	88193867	-	SAOUHSC_00046	-	hypothetical protein
45	 30.18	0	49490..50092	+	200	88193868	-	SAOUHSC_00047	-	hypothetical protein
46	 31.34	0	50359..53511	+	1050	88193869	-	SAOUHSC_00049	-	hypothetical protein
47	 32.09	0	53568..54050	+	160	88193870	-	SAOUHSC_00050	-	hypothetical protein
48	 33.33	0	54255..55241	+	328	88193871	-	SAOUHSC_00051	-	1-phosphatidylinositol phosphodiesterase precursor, putative
49	 29.57	0	55462..56232	+	256	88193872	-	SAOUHSC_00052	-	hypothetical protein
50	 28.15	-1	56284..57054	+	256	88193873	-	SAOUHSC_00053	-	hypothetical protein
51	 29.96	0	57118..57888	+	256	88193874	-	SAOUHSC_00054	-	hypothetical protein
52	 31.12	0	57955..58722	+	255	88193875	-	SAOUHSC_00055	-	hypothetical protein
53	 33.70	0	58855..61053	+	732	88193876	-	SAOUHSC_00056	-	hypothetical protein
54	 37.15	+1	61204..62382	+	392	88193877	-	SAOUHSC_00057	-	hypothetical protein
55	 36.72	+1	62384..63772	+	462	88193878	-	SAOUHSC_00058	-	hypothetical protein
56	 36.10	0	64265..65926	-	553	88193879	-	SAOUHSC_00060	-	hypothetical protein
57	 35.53	0	66252..68027	-	591	88193880	-	SAOUHSC_00061	-	hypothetical protein
58	 30.81	0	68201..69073	-	290	88193881	-	SAOUHSC_00062	-	hypothetical protein
59	 29.04	0	69186..70583	+	465	88193882	-	SAOUHSC_00064	-	hypothetical protein
60	 29.96	0	70773..71246	+	157	88193883	-	SAOUHSC_00065	-	hypothetical protein
61	 34.59	0	71508..73100	+	530	88193884	-	SAOUHSC_00067	-	L-lactate permease
62	 38.17	+1	73429..74979	-	516	88193885	-	SAOUHSC_00069	-	protein A
63	 27.49	-1	75400..76152	-	250	88193886	-	SAOUHSC_00070	-	staphylococcal accessory regulator-like protein
64	 37.05	+1	76521..77435	-	304	88193887	-	SAOUHSC_00071	-	lipoprotein, SirC, putative
65	 38.55	+1	77516..78511	-	331	88193888	-	SAOUHSC_00072	-	lipoprotein, SirB, putative
66	 32.23	0	78527..79519	-	330	88193889	-	SAOUHSC_00074	-	periplasmic binding protein, putative
67	 36.64	+1	79885..80730	+	281	88193890	-	SAOUHSC_00075	-	hypothetical protein
68	 37.39	+1	80727..81737	+	336	88193891	-	SAOUHSC_00076	-	ornithine cyclodeaminase, putative
69	 35.90	0	81758..83512	+	584	88193892	-	SAOUHSC_00077	-	hypothetical protein
70	 39.14	+1	83505..84761	+	418	88193893	-	SAOUHSC_00078	-	hypothetical protein
71	 36.61	+1	84751..86487	+	578	88193894	-	SAOUHSC_00079	-	hypothetical protein
72	 35.98	0	86396..88246	+	616	88193895	-	SAOUHSC_00080	-	hypothetical protein
73	 40.15	+1	88221..88997	+	258	88193896	-	SAOUHSC_00081	-	hypothetical protein
74	 36.58	0	88997..90199	+	400	88193897	-	SAOUHSC_00082	-	hypothetical protein
75	 36.73	+1	90203..90967	+	254	88193898	-	SAOUHSC_00083	-	hypothetical protein
76	 28.65	-1	90905..91096	-	63	88196670	-	SAOUHSC_A00084	-	hypothetical protein
77	 29.66	0	91163..91570	+	135	88193899	-	SAOUHSC_00084	-	hypothetical protein
78	 31.58	0	91620..92246	+	208	88193900	-	SAOUHSC_00085	-	hypothetical protein
79	 40.93	+2	92458..93234	+	258	88193901	-	SAOUHSC_00086	-	acetoin reductase
80	 23.58	-2	93378..93500	+	40	88193902	-	SAOUHSC_00087	-	hypothetical protein
81	 31.91	0	93570..94550	+	326	88193903	-	SAOUHSC_00088	-	hypothetical protein
82	 34.78	0	94513..95205	+	230	88193904	-	SAOUHSC_00089	-	hypothetical protein
83	 33.25	0	95415..96581	+	388	88193905	-	SAOUHSC_00090	-	hypothetical protein
84	 30.51	0	96562..97800	+	412	88193906	-	SAOUHSC_00091	-	hypothetical protein
85	 31.38	0	97790..99220	+	476	88193907	-	SAOUHSC_00092	-	hypothetical protein
86	 35.67	0	99488..100087	+	199	88193908	-	SAOUHSC_00093	-	superoxide dismutase, putative
87	 35.50	0	100455..101054	+	199	88193909	-	SAOUHSC_00094	-	hypothetical protein
88	 35.71	0	101370..102125	-	251	88193910	-	SAOUHSC_00096	-	GntR family transcriptional regulator
89	 30.67	0	102228..102452	-	74	88196671	-	SAOUHSC_A00097	-	hypothetical protein
90	 37.57	+1	102361..103068	+	235	88193911	-	SAOUHSC_00097	-	purine nucleoside phosphorylase
91	 32.00	0	103075..104427	+	450	88193912	-	SAOUHSC_00099	-	hypothetical protein
92	 39.97	+1	104508..105170	+	220	88193913	-	SAOUHSC_00100	-	deoxyribose-phosphate aldolase
93	 36.81	+1	105198..106376	+	392	88193914	-	SAOUHSC_00101	-	phosphopentomutase
94	 37.01	+1	106507..107322	-	271	88193915	-	SAOUHSC_00102	-	phosphonates ABC transporter, permease protein CC0363, putative
95	 34.33	0	107319..108119	-	266	88193916	-	SAOUHSC_00103	-	phosphonates ABC transporter, permease protein CC0363, putative
96	 34.88	0	108121..108894	-	257	88193917	-	SAOUHSC_00104	-	amino acid ABC transporter, ATP-binding protein, putative
97	 31.03	0	109108..110064	-	318	88193918	-	SAOUHSC_00105	-	phosphonate ABC transporter, substrate-binding protein, putative
98	 36.83	+1	110293..111837	+	514	88193919	-	SAOUHSC_00106	-	hypothetical protein
99	 36.33	0	111888..113423	+	511	88193920	-	SAOUHSC_00107	-	hypothetical protein
100	 22.55	-2	113507..113710	+	67	88193921	-	SAOUHSC_00108	-	hypothetical protein
32.73	MEAN

3.85	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.