IslandPath Analysis: Anaeromyxobacter sp. K



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 74.54   STD DEV: 4.42
Anaeromyxobacter sp. K, complete genome - 1..5061632
4457 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 70.37	0	36..1412	+	458	197120422	-	AnaeK_0001	-	chromosomal replication initiator protein DnaA
2	 68.44	-1	1830..2957	+	375	197120423	-	AnaeK_0002	-	DNA polymerase III, beta subunit
3	 75.78	0	3087..4205	+	372	197120424	-	AnaeK_0003	-	DNA replication and repair protein RecF
4	 69.14	-1	4393..6780	+	795	197120425	-	AnaeK_0004	-	DNA gyrase, B subunit
5	 70.78	0	6807..7802	+	331	197120426	-	AnaeK_0005	-	3-oxoacyl-(acyl-carrier-protein) synthase III
6	 76.05	0	8012..8533	+	173	197120427	-	AnaeK_0006	-	peptidase zinc-dependent
7	 77.52	0	8530..9312	+	260	197120428	-	AnaeK_0007	-	hypothetical protein
8	 73.27	0	9718..11853	-	711	197120429	-	AnaeK_0008	-	protein of unknown function DUF224 cysteine-rich region domain protein
9	 79.98	+1	11969..13012	-	347	197120430	-	AnaeK_0009	-	hypothetical protein
10	 76.08	0	13324..13992	-	222	197120431	-	AnaeK_0010	-	DSBA oxidoreductase
11	 73.58	0	14111..15094	-	327	197120432	-	AnaeK_0011	-	alpha-L-glutamate ligase, RimK family
12	 71.52	0	15217..18057	+	946	197120433	-	AnaeK_0012	-	isoleucyl-tRNA synthetase
13	 71.18	0	18057..18677	+	206	197120434	-	AnaeK_0013	-	lipoprotein signal peptidase
14	 74.28	0	18690..19595	+	301	197120435	-	AnaeK_0014	-	prolipoprotein diacylglyceryl transferase
15	 75.23	0	19629..20375	+	248	197120436	-	AnaeK_0015	-	hypothetical protein
16	 77.78	0	20563..21003	+	146	197120437	-	AnaeK_0016	-	hypothetical protein
17	 69.88	-1	21489..21893	-	134	197120438	-	AnaeK_0017	-	transcriptional regulator, XRE family
18	 62.03	-2	21945..22397	-	150	197120439	-	AnaeK_0018	-	hypothetical protein
19	 78.48	0	22583..23107	-	174	197120440	-	AnaeK_0019	-	response regulator receiver protein
20	 74.10	0	23413..23775	+	120	197120441	-	AnaeK_0020	-	hypothetical protein
21	 68.65	-1	23788..24594	-	268	197120442	-	AnaeK_0021	-	hypothetical protein
22	 71.84	0	24609..25961	-	450	197120443	-	AnaeK_0022	-	hypothetical protein
23	 75.61	0	26366..27763	+	465	197120444	-	AnaeK_0023	-	histidine kinase
24	 72.05	0	27793..28182	-	129	197120445	-	AnaeK_0024	-	Glyoxalase/bleomycin resistance protein/dioxygenase
25	 78.29	0	28217..29119	+	300	197120446	-	AnaeK_0025	-	helix-turn-helix domain protein
26	 70.78	0	29196..30728	+	510	197120447	-	AnaeK_0026	-	prolyl-tRNA synthetase
27	 72.67	0	30892..32274	+	460	197120448	-	AnaeK_0027	-	Fibronectin type III domain protein
28	 74.81	0	32467..32994	-	175	197120449	-	AnaeK_0028	-	hypothetical protein
29	 75.33	0	33083..33682	-	199	197120450	-	AnaeK_0029	-	NAD(P)H dehydrogenase (quinone)
30	 79.39	+1	33774..34763	-	329	197120451	-	AnaeK_0030	-	NAD-dependent epimerase/dehydratase
31	 79.55	+1	34843..35781	+	312	197120452	-	AnaeK_0031	-	transcriptional regulator, LysR family
32	 75.40	0	35952..38183	+	743	197120453	-	AnaeK_0032	-	fibronectin, type III
33	 78.17	0	38299..40254	-	651	197120454	-	AnaeK_0033	-	methyl-accepting chemotaxis sensory transducer
34	 76.54	0	40522..41544	+	340	197120455	-	AnaeK_0034	-	short-chain dehydrogenase/reductase SDR
35	 70.59	0	41821..43044	-	407	197120456	-	AnaeK_0035	-	membrane protein involved in aromatic hydrocarbon degradation
36	 73.92	0	43058..46006	-	982	197120457	-	AnaeK_0036	-	hypothetical protein
37	 72.98	0	46285..47916	+	543	197120458	-	AnaeK_0037	-	Na+/solute symporter
38	 74.07	0	47900..48061	+	53	197120459	-	AnaeK_0038	-	hypothetical protein
39	 76.24	0	48112..49386	+	424	197120460	-	AnaeK_0039	-	hypothetical protein
40	 74.13	0	49569..50894	-	441	197120461	-	AnaeK_0040	-	Phenylacetate--CoA ligase
41	 72.52	0	50898..51341	-	147	197120462	-	AnaeK_0041	-	amino acid-binding ACT domain protein
42	 71.64	0	51361..52686	-	441	197120463	-	AnaeK_0042	-	Phenylacetate--CoA ligase
43	 75.26	0	52700..53188	-	162	197120464	-	AnaeK_0043	-	pyruvate ferredoxin/flavodoxin oxidoreductase
44	 74.34	0	53181..54821	-	546	197120465	-	AnaeK_0044	-	thiamine pyrophosphate protein domain protein TPP-binding
45	 77.49	0	54948..55871	+	307	197120466	-	AnaeK_0045	-	phosphate butyryltransferase
46	 80.19	+1	55868..56998	+	376	197120467	-	AnaeK_0046	-	butyrate kinase
47	 81.37	+1	57042..58490	-	482	197120468	-	AnaeK_0047	-	transcriptional regulator, GntR family with aminotransferase domain
48	 78.15	0	58555..59634	+	359	197120469	-	AnaeK_0048	-	GCN5-related N-acetyltransferase
49	 78.68	0	59641..60231	-	196	197120470	-	AnaeK_0049	-	SNARE associated Golgi protein
50	 76.83	0	60268..62265	-	665	197120471	-	AnaeK_0050	-	hypothetical protein
51	 71.08	0	62340..62837	-	165	197120472	-	AnaeK_0051	-	hypothetical protein
52	 70.02	-1	63058..63861	+	267	197120473	-	AnaeK_0052	-	Electron transfer flavoprotein alpha/beta-subunit
53	 76.12	0	63907..64869	+	320	197120474	-	AnaeK_0053	-	Electron transfer flavoprotein alpha subunit
54	 75.32	0	64898..65902	+	334	197120475	-	AnaeK_0054	-	beta-lactamase domain protein
55	 68.90	-1	65957..66718	+	253	197120476	-	AnaeK_0055	-	Integral membrane protein TerC
56	 75.41	0	66737..67651	+	304	197120477	-	AnaeK_0056	-	protein of unknown function DUF6 transmembrane
57	 76.94	0	67713..68900	+	395	197120478	-	AnaeK_0057	-	MltA domain protein
58	 70.13	0	69005..70303	-	432	197120479	-	AnaeK_0058	-	uracil-xanthine permease
59	 63.89	-2	70555..70698	+	47	197120480	-	AnaeK_0059	-	hypothetical protein
60	 74.02	0	70762..71754	+	330	197120481	-	AnaeK_0060	-	putative mRNA 3'-end processing factor
61	 74.02	0	71789..72808	+	339	197120482	-	AnaeK_0061	-	pseudouridine synthase, RluA family
62	 72.18	0	72845..75403	+	852	197120483	-	AnaeK_0062	-	penicillin-binding protein, 1A family
63	 71.07	0	75606..77672	+	688	197120484	-	AnaeK_0063	-	methyl-accepting chemotaxis sensory transducer
64	 73.24	0	77844..78284	-	146	197120485	-	AnaeK_0064	-	protein of unknown function DUF55
65	 76.43	0	78380..78799	+	139	197120486	-	AnaeK_0065	-	sec-independent translocation protein mttA/Hcf106
66	 68.53	-1	78806..79612	+	268	197120487	-	AnaeK_0066	-	Sec-independent protein translocase, TatC subunit
67	 74.24	0	79686..79883	+	65	197120488	-	AnaeK_0067	-	hypothetical protein
68	 75.86	0	79900..81096	+	398	197120489	-	AnaeK_0068	-	acetyl-CoA acetyltransferase
69	 65.15	-2	81168..81365	+	65	197120490	-	AnaeK_0069	-	hypothetical protein
70	 73.28	0	81372..82112	+	246	197120491	-	AnaeK_0070	-	Rhomboid family protein
71	 78.84	0	82135..85404	-	1089	197120492	-	AnaeK_0071	-	putative CheA signal transduction histidine kinase
72	 73.24	0	85533..87479	+	648	197120493	-	AnaeK_0072	-	Radical SAM domain protein
73	 74.26	0	87540..88145	+	201	197120494	-	AnaeK_0073	-	hypothetical protein
74	 79.87	+1	88222..88971	+	249	197120495	-	AnaeK_0074	-	lipolytic protein G-D-S-L family
75	 74.02	0	89006..90379	+	457	197120496	-	AnaeK_0075	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
76	 76.93	0	90379..91050	+	223	197120497	-	AnaeK_0076	-	dethiobiotin synthase
77	 77.29	0	91103..91375	+	90	197120498	-	AnaeK_0077	-	hypothetical protein
78	 67.04	-1	91398..91667	-	89	197120499	-	AnaeK_0078	-	Domain of unknown function DUF1844
79	 76.28	0	91689..93113	-	474	197120500	-	AnaeK_0079	-	2-alkenal reductase
80	 65.42	-2	93082..93321	-	79	197120501	-	AnaeK_0080	-	hypothetical protein
81	 80.56	+1	93425..94072	+	215	197120502	-	AnaeK_0081	-	thiamine-phosphate pyrophosphorylase
82	 77.36	0	94069..94779	+	236	197120503	-	AnaeK_0082	-	peptidase C26
83	 80.76	+1	94776..95534	+	252	197120504	-	AnaeK_0083	-	phosphomethylpyrimidine kinase
84	 75.75	0	96522..97259	+	245	197120505	-	AnaeK_0084	-	protein of unknown function DUF1568
85	 70.68	0	97281..98702	-	473	197120506	-	AnaeK_0085	-	replicative DNA helicase
86	 73.50	0	98919..99752	+	277	197120507	-	AnaeK_0086	-	Late embryogenesis abundant protein 2
87	 76.76	0	99963..101885	-	640	197120508	-	AnaeK_0087	-	hypothetical protein
88	 79.41	+1	101908..102966	-	352	197120509	-	AnaeK_0088	-	hypothetical protein
89	 78.81	0	103122..103796	-	224	197120510	-	AnaeK_0089	-	LrgB family protein
90	 79.14	+1	103793..104209	-	138	197120511	-	AnaeK_0090	-	LrgA family protein
91	 78.95	0	104291..105226	+	311	197120512	-	AnaeK_0091	-	transcriptional regulator, LysR family
92	 72.52	0	105187..108639	-	1150	197120513	-	AnaeK_0092	-	methionine synthase
93	 73.11	0	108814..109884	+	356	197120514	-	AnaeK_0093	-	Radical SAM domain protein
94	 73.28	0	109903..110265	-	120	197120515	-	AnaeK_0094	-	hypothetical protein
95	 74.30	0	110364..111044	+	226	197120516	-	AnaeK_0095	-	outer membrane lipoprotein carrier protein LolA
96	 75.36	0	111061..112533	+	490	197120517	-	AnaeK_0096	-	protein of unknown function DUF853 NPT hydrolase putative
97	 78.51	0	112634..114052	+	472	197120518	-	AnaeK_0097	-	integral membrane sensor signal transduction histidine kinase
98	 76.96	0	114062..114916	+	284	197120519	-	AnaeK_0098	-	protein of unknown function DUF1684
99	 73.79	0	115168..115602	+	144	197120520	-	AnaeK_0099	-	hemerythrin-like metal-binding protein
100	 73.26	0	115757..117166	-	469	197120521	-	AnaeK_0100	-	MiaB-like tRNA modifying enzyme YliG
74.54	MEAN

4.42	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.