version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 55.95 0 337..2799 + 820 197250740 thrA SeAg_B0002 - aspartokinase/homoserine dehydrogenase I 2 57.53 0 2801..3730 + 309 197249934 thrB SeAg_B0003 - homoserine kinase 3 56.64 0 3734..5020 + 428 197249168 thrC SeAg_B0004 - threonine synthase 4 50.52 0 5113..5886 - 257 197249510 - SeAg_B0005 - hypothetical protein 5 55.76 0 5965..7422 - 485 197248129 - SeAg_B0006 - amino-acid carrier protein AlsT 6 54.19 0 7664..8617 + 317 197248384 tal2 SeAg_B0007 - transaldolase 7 55.67 0 8728..9318 + 196 197251166 mog SeAg_B0008 - molybdopterin biosynthesis protein Mog 8 54.14 0 9375..9941 - 188 197251907 - SeAg_B0009 - membrane protein, GPR1/FUN34/yaaH family 9 54.06 0 10091..10804 - 237 197250147 - SeAg_B0010 - positive regulator for sigma H 10 50.12 0 10840..11244 - 134 197248692 - SeAg_B0011 - protein YaaI 11 30.95 -2 11299..11424 + 41 197247366 - SeAg_B0012 - hypothetical protein 12 52.63 0 11593..13509 + 638 197247979 dnaK SeAg_B0013 - chaperone protein DnaK 13 53.95 0 13595..14734 + 379 197250919 dnaJ SeAg_B0014 - chaperone protein DnaJ 14 27.19 -2 14846..14959 + 37 197251887 - SeAg_B0015 - hypothetical protein 15 40.51 -1 15015..15962 + 315 197251857 - SeAg_B0016 - putative transcriptional regulator, LysR family 16 39.60 -1 16131..16433 + 100 197249970 - SeAg_B0017 - putative bacteriophage protein 17 51.12 0 16494..17027 - 177 197250023 - SeAg_B0018 - hypothetical protein 18 38.96 -1 17044..17487 - 147 197251520 - SeAg_B0019 - hypothetical protein 19 34.88 -2 17614..17742 - 42 197251339 - SeAg_B0020 - hypothetical protein 20 51.24 0 17868..19967 + 699 197248226 - SeAg_B0021 - exochitinase 21 54.85 0 20060..23056 + 998 197248849 - SeAg_B0022 - putative hydroxymethyltransferase 22 46.38 0 23337..24041 + 234 197250746 - SeAg_B0023 - putative cytoplasmic protein 23 51.57 0 24471..25013 + 180 197250118 - SeAg_B0024 - fimbrial subunit 24 50.85 0 24973..25800 + 275 197249742 - SeAg_B0025 - chaperone protein FimC 25 54.48 0 25760..28426 + 888 197251618 - SeAg_B0026 - outer membrane usher protein FimD 26 50.40 0 28427..29434 + 335 197250867 - SeAg_B0027 - mannose binding protein FimH 27 48.84 0 29465..29980 + 171 197250403 - SeAg_B0028 - fimbrial subunit 28 56.65 0 29996..30514 + 172 197249913 - SeAg_B0029 - fimbrial subunit 29 55.50 0 30576..31211 + 211 197251411 - SeAg_B0030 - fimbrial chaperone 30 36.89 -2 32547..32996 - 149 197247417 - SeAg_B0033 - hypothetical protein 31 38.61 -2 33366..34370 + 334 197249381 - SeAg_B0034 - putative transcriptional regulator 32 34.70 -2 34378..34815 - 145 197250600 - SeAg_B0035 - putative transcription regulator 33 29.93 -2 34827..34973 + 48 197251863 - SeAg_B0036 - hypothetical protein 34 46.19 0 35338..37056 + 572 197251278 - SeAg_B0037 - arylsulfotransferase 35 46.96 0 37102..38664 - 520 197250571 - SeAg_B0038 - 5'-Nucleotidase domain protein 36 43.96 -1 38772..39533 - 253 197248673 - SeAg_B0039 - putative outer membrane/exported protein 37 52.21 0 40128..41621 + 497 197249148 - SeAg_B0040 - sulfatase 38 49.83 0 41723..42910 + 395 197247602 - SeAg_B0041 - chondroitin sulfate/heparin utilization regulation protein 39 49.60 0 42935..44182 + 415 197247498 - SeAg_B0042 - putative cytoplasmic protein 40 49.94 0 44309..46024 + 571 197248163 - SeAg_B0043 - arylsulfotransferase 41 56.56 0 46187..47353 + 388 197251902 nhaA SeAg_B0044 - Na+/H+ antiporter NhaA 42 50.67 0 47415..48314 + 299 197250162 - SeAg_B0045 - transcriptional activator protein NhaR 43 54.51 0 48369..50408 - 679 197248810 - SeAg_B0046 - glycoside hydrolase, family 31 44 49.01 0 50448..51863 - 471 197249256 - SeAg_B0047 - xylose-proton symporter 45 46.59 0 52277..52540 - 87 197247824 rpsT SeAg_B0048 - ribosomal protein S20 46 44.22 -1 52715..52861 + 48 197249372 - SeAg_B0049 - hypothetical protein 47 56.87 0 52869..53807 + 312 197248853 ribF SeAg_B0050 - riboflavin biosynthesis protein RibF 48 54.68 0 53816..56686 + 956 197248475 ileS SeAg_B0051 - isoleucyl-tRNA synthetase 49 52.69 0 56686..57186 + 166 197247967 lspA SeAg_B0052 - signal peptidase II 50 54.55 0 57200..57331 + 43 197249530 - SeAg_B0053 - hypothetical protein 51 54.44 0 57341..57790 + 149 197249034 fkpB SeAg_B0054 - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase 52 57.52 0 57793..58743 + 316 197251022 ispH SeAg_B0055 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 53 40.31 -1 58855..58983 - 42 197250613 - SeAg_B0056 - hypothetical protein 54 48.52 0 58994..60145 + 383 197247355 - SeAg_B0057 - hypothetical protein 55 57.00 0 60161..61081 + 306 197250636 - SeAg_B0058 - Non-specific ribonucleoside hydrolase RihC 56 48.33 0 61103..61789 - 228 197248621 - SeAg_B0059 - transcriptional regulatory protein CitB 57 47.44 0 61791..63449 - 552 197249131 - SeAg_B0060 - sensor kinase DpiB 58 63.59 +1 63545..64846 - 433 197250360 - SeAg_B0061 - oxaloacetate decarboxylase beta chain 59 64.29 +1 64862..66628 - 588 197250006 oadA SeAg_B0062 - oxaloacetate decarboxylase alpha subunit 60 57.50 0 66644..66883 - 79 197249120 - SeAg_B0063 - hypothetical protein 61 49.52 0 67042..68382 - 446 197248761 - SeAg_B0064 - citrate-sodium symporter 62 53.68 0 68639..69670 + 343 197247805 citC SeAg_B0065 - [citrate (pro-3S)-lyase] ligase 63 56.46 0 69700..69993 + 97 197247457 citD SeAg_B0066 - citrate lyase acyl carrier protein 64 55.29 0 69990..70859 + 289 197251141 citE SeAg_B0067 - citrate (pro-3S)-lyase, beta subunit 65 55.16 0 70870..72390 + 506 197249273 citF SeAg_B0068 - citrate lyase, alpha subunit 66 56.16 0 72390..72941 + 183 197247435 citX SeAg_B0069 - holo-ACP synthase CitX 67 54.79 0 72919..73827 + 302 197247849 citG SeAg_B0070 - triphosphoribosyl-dephospho-CoA synthase CitG 68 56.69 0 74007..74828 + 273 197251291 dapB SeAg_B0071 - dihydrodipicolinate reductase 69 30.73 -2 75287..75478 - 63 197251772 - SeAg_B0072 - hypothetical protein 70 55.35 0 75692..76840 + 382 197249998 carA SeAg_B0073 - carbamoyl-phosphate synthase, small subunit 71 59.36 +1 76859..80086 + 1075 197250511 carB SeAg_B0074 - carbamoyl-phosphate synthase, large subunit 72 55.95 0 80832..81428 - 198 197248515 - SeAg_B0076 - carnitine operon protein CaiE 73 56.23 0 81538..82323 - 261 197251288 - SeAg_B0077 - carnitinyl-CoA dehydratase 74 50.77 0 82377..83930 - 517 197247510 - SeAg_B0078 - probable crotonobetaine/carnitine-CoA ligase 75 53.56 0 83993..85213 - 406 197250411 - SeAg_B0079 - crotonobetainyl-CoA:carnitine CoA-transferase 76 52.84 0 85322..86464 - 380 197251657 caiA SeAg_B0080 - crotonobetainyl-CoA dehydrogenase 77 53.82 0 86499..88016 - 505 197249408 caiT SeAg_B0081 - L-carnitine/gamma-butyrobetaine antiporter 78 26.50 -2 88158..88274 + 38 197250163 - SeAg_B0082 - hypothetical protein 79 28.49 -2 88244..88429 + 61 197248396 - SeAg_B0083 - hypothetical protein 80 51.88 0 88497..89267 + 256 197248654 fixA SeAg_B0084 - protein FixA 81 59.34 +1 89283..90224 + 313 197250896 fixB SeAg_B0085 - electron transfer flavoprotein, alpha subunit 82 55.32 0 90274..91560 + 428 197251386 fixC SeAg_B0086 - protein FixC 83 54.51 0 91557..91844 + 95 197250583 - SeAg_B0087 - ferredoxin-like protein ydiT 84 54.58 0 91925..93331 + 468 197249355 - SeAg_B0088 - putative metabolite transport protein YaaU 85 48.05 0 93420..93650 + 76 197247422 - SeAg_B0089 - hypothetical protein 86 46.81 0 93936..94358 + 140 197248035 - SeAg_B0090 - probable secreted protein 87 52.14 0 94362..94478 - 38 197248535 - SeAg_B0091 - hypothetical protein 88 46.74 0 94582..94872 - 96 197249316 - SeAg_B0092 - probable secreted protein 89 46.88 0 95769..97658 + 629 197247800 - SeAg_B0093 - sulfatase 90 53.30 0 98212..98742 + 176 197247954 kefF SeAg_B0094 - glutathione-regulated potassium-efflux system ancillary protein kefF 91 57.86 0 98735..100597 + 620 197251104 - SeAg_B0095 - glutathione-regulated potassium-efflux system protein KefC 92 53.54 0 100796..101275 + 159 197251822 folA SeAg_B0096 - dihydrofolate reductase 93 55.95 0 101381..102229 - 282 197251522 - SeAg_B0097 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 94 54.50 0 102240..102617 - 125 197250718 apaG SeAg_B0098 - protein ApaG 95 52.55 0 102620..103441 - 273 197249198 ksgA SeAg_B0099 - dimethyladenosine transferase 96 58.79 +1 103438..104427 - 329 197247407 pdxA SeAg_B0100 - 4-hydroxythreonine-4-phosphate dehydrogenase 97 54.47 0 104427..105713 - 428 197248833 surA SeAg_B0101 - chaperone/peptidyl-prolyl cis-trans isomerase SurA 98 52.60 0 105767..108127 - 786 197250730 imp SeAg_B0102 - LPS-assembly protein 99 47.53 0 108137..108298 - 53 197250494 - SeAg_B0103 - hypothetical protein 100 54.00 0 108381..109193 + 270 197249861 - SeAg_B0104 - DnaJ domain protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0