IslandPath Analysis: Mycoplasma hyopneumoniae 7448



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 29.19   STD DEV: 4.17
Mycoplasma hyopneumoniae 7448, complete genome - 1..920079
663 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 26.91	0	198..1598	+	466	72080343	dnaA	MHP7448_0001	-	chromosomal replication initiation protein
2	 28.14	0	1743..2879	+	378	72080344	dnaN	MHP7448_0002	-	DNA polymerase III beta subunit
3	 32.90	0	3010..4842	+	610	72080345	gidA	MHP7448_0003	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
4	 29.53	0	4854..5300	+	148	72080346	-	MHP7448_0004	-	hypothetical protein
5	 28.76	0	5314..6297	+	327	72080347	-	MHP7448_0005	-	putative MgpA like-protein
6	 29.08	0	6299..7261	+	320	72080348	-	MHP7448_0006	-	DHH family phosphoesterase
7	 25.89	0	7290..7934	+	214	72080349	-	MHP7448_0007	-	hypothetical protein
8	 32.14	0	8024..9025	+	333	72080350	ftsY	MHP7448_0008	-	cell division protein ftsY
9	 29.93	0	9192..11216	+	674	72080351	-	MHP7448_0009	-	hypothetical protein
10	 29.17	0	11302..12309	+	335	72080352	hrcA	MHP7448_0010	-	heat-inducible transcription repressor
11	 27.49	0	12306..13058	+	250	72080353	grpE	MHP7448_0011	-	heat shock protein
12	 28.35	0	13042..14646	+	534	72080354	argS	MHP7448_0012	-	arginyl-tRNA synthetase
13	 30.89	0	14651..14896	+	81	72080355	-	MHP7448_0013	-	hypothetical protein
14	 35.42	+1	14965..15828	+	287	72080356	fba	MHP7448_0014	-	fructose-bisphosphate aldolase
15	 25.06	0	15835..16680	+	281	72080357	rluC	MHP7448_0015	-	ribosomal large subunit pseudouridine synthase C
16	 19.23	-2	16714..17025	-	103	72080358	-	MHP7448_0016	-	hypothetical protein
17	 22.26	-1	17360..18163	+	267	72080359	-	MHP7448_0017	-	hypothetical protein
18	 23.87	-1	18472..18714	-	80	72080360	-	MHP7448_0018	-	hypothetical protein
19	 25.16	0	18860..21136	-	758	72080361	-	MHP7448_0019	-	ABC transporter ATP-binding protein
20	 25.97	0	21337..23577	-	746	72080362	-	MHP7448_0020	-	ABC transporter ATP-binding protein
21	 26.33	0	23651..25978	-	775	72080363	-	MHP7448_0021	-	ABC transporter ATP-binding protein
22	 31.86	0	25965..26642	-	225	72080364	-	MHP7448_0022	-	hypothetical protein
23	 24.02	-1	26944..29241	-	765	72080365	-	MHP7448_0023	-	ABC transporter ATP-binding protein
24	 26.20	0	29352..31679	-	775	72080366	-	MHP7448_0024	-	ABC transporter ATP-binding protein
25	 32.85	0	31666..32493	-	275	72080367	-	MHP7448_0025	-	hypothetical protein
26	 25.85	0	32885..33325	+	146	72080368	sipS	MHP7448_0026	-	signal peptidase I
27	 27.03	0	33393..33725	+	110	72080369	gatC	MHP7448_0027	-	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
28	 29.78	0	33715..35037	+	440	72080370	gatA	MHP7448_0028	-	amidase
29	 26.34	0	35030..36430	+	466	72080371	gatB	MHP7448_0029	-	aspartyl/glutamyl-tRNA amidotransferase subunit B
30	 27.45	0	36661..37170	+	169	72080372	-	MHP7448_0030	-	hypothetical protein
31	 25.19	0	37287..37814	-	175	72080373	lsp	MHP7448_0031	-	lipoprotein signal peptidase
32	 30.71	0	37858..40521	-	887	72080374	ileS	MHP7448_0032	-	isoleucyl-tRNA synthetase
33	 28.18	0	40518..43058	-	846	72080375	parC	MHP7448_0033	-	DNA topoisomerase IV subunit A
34	 31.26	0	43051..44979	-	642	72080376	parE	MHP7448_0034	-	topoisomerase IV subunit B
35	 35.01	+1	45190..46200	+	336	72080377	gap	MHP7448_0035	-	glyceraldehyde 3-phosphate dehydrogenase
36	 29.33	0	46329..48326	+	665	72080378	-	MHP7448_0036	-	hypothetical protein
37	 28.72	0	48426..50504	-	692	72080379	vacB	MHP7448_0037	-	VACB-like ribonuclease II
38	 23.65	-1	50803..52341	-	512	72080380	cls	MHP7448_0038	-	cardiolipin synthetase
39	 34.34	+1	52346..53335	-	329	72080381	recA	MHP7448_0039	-	recombinase A
40	 24.74	-1	53566..54321	+	251	72080382	licA	MHP7448_0040	-	PTS system, lichenan-specific IIA component
41	 30.71	0	54323..55582	+	419	72080383	obgE	MHP7448_0041	-	GTPase ObgE
42	 28.81	0	55685..56038	+	117	72080384	-	MHP7448_0042	-	hypothetical protein
43	 28.70	0	56042..57250	+	402	72080385	-	MHP7448_0043	-	hypothetical protein
44	 27.70	0	57252..57677	+	141	72080386	-	MHP7448_0044	-	hypothetical protein
45	 23.64	-1	57704..58879	+	391	72080387	dinP	MHP7448_0045	-	DNA polymerase IV
46	 21.06	-1	58884..59315	+	143	72080388	-	MHP7448_0046	-	hypothetical protein
47	 27.19	0	59312..60043	+	243	72080389	atpB	MHP7448_0047	-	F0F1 ATP synthase subunit A
48	 38.89	+2	60071..60376	+	101	72080390	atpE	MHP7448_0048	-	F0F1 ATP synthase subunit C
49	 27.92	0	60406..60996	+	196	72080391	atpF	MHP7448_0049	-	ATP synthase subunit B
50	 23.12	-1	61002..61559	+	185	72080392	atpH	MHP7448_0050	-	F0F1 ATP synthase subunit delta
51	 34.51	+1	61575..63101	+	508	72080393	atpA-1	MHP7448_0051	-	F0F1 ATP synthase subunit alpha
52	 25.15	0	63130..63960	+	276	72080394	atpG	MHP7448_0052	-	ATP synthase gamma chain
53	 37.22	+1	63978..65393	+	471	72080395	atpD	MHP7448_0053	-	F0F1 ATP synthase subunit beta
54	 27.16	0	65748..66233	+	161	72080396	recU	MHP7448_0054	-	Holliday junction-specific endonuclease
55	 31.56	0	66503..67405	+	300	72080397	rpsB	MHP7448_0055	-	30S ribosomal protein S2
56	 31.91	0	67430..68341	+	303	72080398	tsf	MHP7448_0056	-	elongation factor Ts
57	 31.29	0	68426..69748	+	440	72080399	ffh	MHP7448_0057	-	signal recognition particle protein
58	 29.69	0	69773..71143	+	456	72080400	glyS	MHP7448_0058	-	glycyl-tRNA synthetase
59	 26.93	0	71136..72977	+	613	72080401	dnaG	MHP7448_0059	-	DNA primase
60	 32.79	0	73559..75028	+	489	72080402	rpoD	MHP7448_0060	-	RNA polymerase sigma factor
61	 27.91	0	75035..75808	+	257	72080403	-	MHP7448_0061	-	hypothetical protein
62	 30.93	0	75802..76632	+	276	72080404	nfo	MHP7448_0062	-	endonuclease IV
63	 28.59	0	76649..77893	+	414	72080405	tyrS	MHP7448_0063	-	tyrosyl tRNA synthetase
64	 26.44	0	78299..82666	+	1455	72080406	-	MHP7448_0064	-	hypothetical protein
65	 25.23	0	82780..85617	+	945	72080407	-	MHP7448_0065	-	hypothetical protein
66	 23.78	-1	85675..87192	-	505	72080408	uvrC	MHP7448_0066	-	excinuclease ABC subunit C
67	 35.22	+1	87839..89641	+	600	72080409	dnaK	MHP7448_0067	-	molecular chaperone DnaK
68	 35.20	+1	89858..90982	+	374	72080410	dnaJ	MHP7448_0068	-	heat shock protein DnaJ
69	 29.71	0	91041..91730	+	229	72080411	cmk	MHP7448_0069	-	cytidylate kinase
70	 29.20	0	91745..93049	+	434	72080412	engA	MHP7448_0070	-	GTP-binding protein EngA
71	 29.90	0	93083..93373	+	96	72080413	himA	MHP7448_0071	-	nucleoid DNA-binding protein
72	 29.44	0	93376..93606	+	76	72080414	-	MHP7448_0072	-	hypothetical protein
73	 34.17	+1	93607..95403	+	598	72080415	lepA	MHP7448_0073	-	GTP-binding protein LepA
74	 29.57	0	95465..96421	+	318	72080416	-	MHP7448_0074	-	hypothetical protein
75	 37.31	+1	96738..98825	-	695	72080417	fusA	MHP7448_0075	-	elongation factor G
76	 37.79	+2	98835..99305	-	156	72080418	rpsG	MHP7448_0076	-	30S ribosomal protein S7
77	 37.62	+2	99358..99777	-	139	72080419	rpsL	MHP7448_0077	-	30S ribosomal protein S12
78	 26.51	0	99908..100288	-	126	72080420	-	MHP7448_0078	-	hypothetical protein
79	 24.39	-1	100292..100783	-	163	72080421	-	MHP7448_0079	-	hypothetical protein
80	 25.47	0	100795..101277	-	160	72080422	-	MHP7448_0080	-	hypothetical protein
81	 27.91	0	101560..102906	+	448	72080423	-	MHP7448_0081	-	amino acid permease
82	 33.04	0	103121..104503	+	460	72080424	nox	MHP7448_0082	-	NADH oxidase
83	 32.48	0	104685..105968	-	427	72080425	deoA	MHP7448_0083	-	thymidine phosphorylase
84	 33.19	0	105973..106671	-	232	72080426	deoD	MHP7448_0084	-	purine-nucleoside phosphorylase
85	 21.23	-1	106760..107230	-	156	72080427	-	MHP7448_0085	-	hypothetical protein
86	 34.72	+1	107386..110337	-	983	161611231	secA	MHP7448_0086	-	preprotein translocase subunit SecA
87	 26.25	0	111604..112422	+	272	72080429	rbgA	MHP7448_0087	-	ribosomal biogenesis GTPase
88	 26.17	0	112706..114142	-	478	72080430	-	MHP7448_0088	-	hypothetical protein
89	 22.47	-1	114168..114830	-	220	72080431	-	MHP7448_0089	-	hypothetical protein
90	 28.97	0	115455..116348	+	297	72080432	-	MHP7448_0090	-	hypothetical protein
91	 32.87	0	116732..119545	-	937	72080433	uvrA	MHP7448_0091	-	excinuclease ABC subunit A
92	 29.34	0	119568..122021	-	817	72080434	-	MHP7448_0092	-	hypothetical protein
93	 25.13	0	122229..122618	-	129	72080435	-	MHP7448_0093	-	hypothetical protein
94	 26.20	0	122700..124283	+	527	72080436	-	MHP7448_0094	-	hypothetical protein
95	 22.11	-1	124306..124893	-	195	72080437	-	MHP7448_0095	-	hypothetical protein
96	 30.10	0	125261..125755	+	164	72080438	tpx	MHP7448_0096	-	thiol peroxidase
97	 29.69	0	126284..127270	+	328	72080439	lgt	MHP7448_0097	-	prolipoprotein diacylglyceryl transferase
98	 35.19	+1	127407..128324	+	305	72080440	trxB	MHP7448_0098	-	thioredoxin reductase
99	 29.12	0	128349..131792	+	1147	72080441	-	MHP7448_0099	-	outer membrane protein - P95
100	 28.16	0	131891..134731	+	946	72080442	-	MHP7448_0100	-	hypothetical protein
29.19	MEAN

4.17	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.