version 1.0
Flavobacterium psychrophilum JIP02/86, complete genome - 1..2861988 2412 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 31.98 0 575..3907 + 1110 150024115 - FP0001 - putative chromosome segregation ATPase 2 31.68 0 3900..4322 + 140 150024116 - FP0002 - hypothetical protein 3 36.65 +1 4533..6404 + 623 150024117 gidA FP0003 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 30.51 0 6568..7416 + 282 150024118 - FP0004 - SAM-dependent methyltransferase 5 34.57 0 7680..8243 + 187 150024119 - FP0005 - OmpH family outer membrane protein 6 39.98 +1 9077..11557 + 826 150024120 - FP0006 - hypothetical protein 7 35.18 0 11900..14173 + 757 150024121 - FP0007 - helicase 8 26.27 -1 15024..15575 - 183 150024122 - FP0008 - hypothetical protein 9 27.06 -1 15631..16140 - 169 150024123 - FP0009 - cAMP-binding protein 10 37.24 +1 16177..16560 - 127 150024124 - FP0010 - hypothetical protein 11 35.07 0 16691..17839 - 382 150024125 holB FP0011 - DNA polymerase III, delta prime subunit 12 32.88 0 18268..18705 + 145 150024126 - FP0012 - hypothetical protein 13 32.56 0 18740..20032 + 430 150024127 - FP0013 - hypothetical protein 14 35.01 0 20165..21598 + 477 150024128 sprC FP0014 - putative adhesin precursor SprC 15 40.40 +2 21600..25460 + 1286 150024129 sprD FP0015 - putative cell surface protein precursor SprD 16 36.97 +1 25572..35549 + 3325 150024130 sprB FP0016 - putative adhesin precursor SprB 17 35.39 0 35596..36567 + 323 150024131 - FP0017 - hypothetical protein 18 36.87 +1 36696..37883 + 395 150024132 pgk FP0018 - phosphoglycerate kinase 19 31.14 0 37989..40085 + 698 150024133 mltD FP0019 - membrane-bound lytic murein transglycosylase D precursor 20 33.56 0 40142..40591 + 149 150024134 elaA FP0020 - ElaA protein 21 30.53 0 40588..41406 - 272 150024135 - FP0021 - OmpA family outer membrane protein 22 32.89 0 42033..43391 + 452 150024136 yceA FP0022 - hypothetical protein 23 37.50 +1 43562..44953 + 463 150024137 - FP0023 - hypothetical protein 24 30.02 0 44928..45440 + 170 150024138 gldH FP0024 - gliding motility protein GldH 25 39.74 +1 45446..47770 + 774 150024139 mrcA FP0025 - penicillin-binding protein 1A 26 41.92 +2 47939..48637 + 232 150024140 atoD FP0026 - 3-oxoacid CoA-transferase subunit A family protein AtoD 27 25.36 -1 48654..51689 + 1011 150024141 - FP0027 - type I endonuclease-methyltransferase fusion protein 28 23.83 -2 51689..52309 + 206 150024142 - FP0028 - hypothetical protein 29 31.31 0 52314..52511 + 65 150024143 - FP0029 - hypothetical protein 30 39.27 +1 52601..53257 + 218 150024144 atoA FP0030 - 3-oxoacid CoA-transferase subunit B family protein AtoA 31 34.38 0 53852..55291 - 479 150024145 - FP0031 - transmembrane protein of unknown function 32 32.49 0 55407..56120 - 237 150024146 - FP0032 - hypothetical protein 33 38.85 +1 56226..56696 - 156 150024147 ogt1 FP0033 - methylated-DNA--[protein]-cysteineS-methyltransf erase 34 30.56 0 56980..57375 - 131 150024148 - FP0034 - cytochrome c551/c552 family protein 35 39.38 +1 57616..58608 - 330 150024149 hemB FP0035 - delta-aminolevulinic acid dehydratase 36 28.50 -1 58613..59647 - 344 150024150 - FP0036 - hypothetical protein 37 38.32 +1 59655..60557 - 300 150024151 hemF FP0037 - coproporphyrinogen III oxidase 38 34.04 0 60559..61122 - 187 150024152 - FP0038 - hypothetical protein 39 27.59 -1 61126..61647 - 173 150024153 - FP0039 - ribosomal-protein-amino-adic N-acetyltransferase 40 28.36 -1 61656..62459 - 267 150024154 - FP0040 - hypothetical protein 41 38.60 +1 62500..63525 - 341 150024155 hemE FP0041 - uroporphyrinogen decarboxylase 42 30.02 0 63605..64267 - 220 150024156 hemD FP0042 - uroporphyrinogen-III synthase 43 36.79 +1 64267..65193 - 308 150024157 hemC FP0043 - hydroxymethylbilane synthase 44 33.25 0 65262..66503 - 413 150024158 hemA FP0044 - glutamyl-tRNA reductase 45 30.91 0 66733..67599 + 288 150024159 - FP0045 - AraC family transcriptional regulator 46 37.84 +1 67603..68622 + 339 150024160 hemH FP0046 - ferrochelatase 47 30.76 0 68655..69197 + 180 150024161 - FP0047 - transmembrane protein of unknown function 48 32.66 0 69198..70673 + 491 150024162 - FP0048 - two-component system sensor histidine kinase 49 37.16 +1 70677..71459 + 260 150024163 crt FP0049 - 3-hydroxybutyryl-CoA dehydratase 50 33.02 0 71468..72115 - 215 150024164 - FP0050 - hydrolase 51 34.95 0 72187..73176 - 329 150024165 - FP0051 - putative acyl-[acyl-carrier-protein] desaturase 52 33.61 0 73212..73946 - 244 150024166 plsC FP0052 - 1-acylglycerol-3-phosphate O-acyltransferase 53 40.88 +2 74027..74437 - 136 150024167 yqiW FP0053 - hypothetical protein 54 33.19 0 74600..75289 - 229 150024168 - FP0054 - hydrolase, haloacid dehalogenase family protein 55 38.48 +1 75344..77404 - 686 150024169 metG FP0055 - methionyl-tRNA synthetase 56 29.06 0 77725..77958 + 77 150024170 - FP0056 - hypothetical protein 57 25.20 -1 77964..78983 + 339 150024171 - FP0057 - hypothetical protein 58 35.84 0 79010..79966 + 318 150024172 - FP0058 - putative carboxypeptidase 59 30.45 0 80045..80425 + 126 150024173 - FP0059 - hypothetical protein 60 32.95 0 80426..81466 - 346 150024174 tas FP0060 - aldo/keto reductase family oxidoreductase TAS 61 35.62 0 81601..82563 - 320 150024175 - FP0061 - flagellar motor/chemotaxis (MotB)-related protein 62 37.14 +1 82634..83395 - 253 150024176 xth FP0062 - exodeoxyribonuclease III 63 35.16 0 83592..85397 + 601 150024177 - FP0063 - putative hemolysin 64 38.70 +1 85671..86657 - 328 150024178 - FP0064 - putative phosphoglycerate dehydrogenase 65 23.49 -2 86681..87361 - 226 150024179 - FP0065 - hypothetical protein 66 40.93 +2 87577..88353 - 258 150024180 proC FP0066 - pyrroline-5-carboxylate reductase 67 35.56 0 88364..89713 - 449 150024181 mgtE FP0067 - Mg2+ transporter MgtE 68 33.97 0 89703..90482 - 259 150024182 ksgA FP0068 - dimethyladenosine transferase 69 28.65 -1 90515..91411 - 298 150024183 - FP0069 - hypothetical protein 70 32.70 0 91576..91890 - 104 150024184 - FP0070 - hypothetical protein 71 31.25 0 91963..93741 - 592 150024185 - FP0071 - hypothetical protein 72 36.08 0 93976..95247 - 423 150024186 serS FP0072 - seryl-tRNA synthetase 73 35.85 0 95459..96691 - 410 150024187 - FP0073 - hypothetical protein 74 31.52 0 96688..97128 - 146 150024188 - FP0074 - hypothetical protein 75 38.51 +1 97130..98308 - 392 150024189 - FP0075 - lipoprotein precursor 76 34.94 0 98399..100270 + 623 150024190 mntH FP0076 - manganese transport protein mntH 77 33.18 0 100564..101217 + 217 150024191 sirR FP0077 - metal-dependent transcriptional regulator 78 36.59 +1 101843..102334 - 163 150024192 - FP0078 - hypothetical protein 79 34.85 0 102595..103188 + 197 150024193 - FP0079 - hypothetical protein 80 33.41 0 103517..104851 - 444 150024194 - FP0081 - M50 family membrane-associated zinc metalloprotease precursor 81 37.22 +1 104938..106866 - 642 150024195 - FP0082 - M1 family metalloprotease precursor 82 34.65 0 107000..107380 - 126 150024196 - FP0083 - hypothetical protein 83 29.89 0 108187..108534 + 115 150024197 - FP0084 - hypothetical protein 84 35.04 0 108535..109356 + 273 150024198 yeeZ FP0085 - sugar metabolism protein YeeZ 85 36.49 +1 109411..111471 - 686 150024199 pepO FP0086 - M13 family metallopeptidase PepO precursor 86 36.52 +1 111474..114893 - 1139 150024200 - FP0087 - glycosyl hydrolase 87 30.58 0 114965..115690 + 241 150024201 - FP0088 - cytochrome c oxidase biogenesis protein 88 31.28 0 115786..116028 + 80 150024202 feoA FP0089 - ferrous iron transport protein A 89 33.33 0 116028..118121 + 697 150024203 feoB FP0090 - ferrous iron transport protein B 90 30.30 0 118720..118884 - 54 150024204 - FP0091 - hypothetical protein 91 31.98 0 119212..119877 + 221 150024205 sdhC FP0092 - succinate dehydrogenase, cytochrome b subunit 92 37.51 +1 119887..121896 + 669 150024206 sdhA FP0093 - succinate dehydrogenase flavoprotein subunit 93 25.87 -1 121990..122364 + 124 150024207 - FP0094 - hypothetical protein 94 37.52 +1 122423..123187 + 254 150024208 sdhB FP0095 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 95 33.91 0 123664..124533 + 289 150024209 - FP0096 - hypothetical protein 96 33.77 0 124551..125699 + 382 150024210 fmo FP0097 - flavomodulin 97 32.62 0 126179..127996 - 605 150024211 - FP0099 - hypothetical protein 98 31.49 0 128126..130081 - 651 150024212 - FP0100 - penicillin-binding protein 99 35.85 0 130088..130603 - 171 150024213 - FP0101 - hypothetical protein 100 28.12 -1 130611..130898 - 95 150024214 - FP0102 - hypothetical protein 32.65 MEAN 3.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.