IslandPath Analysis: Burkholderia multivorans ATCC 17616



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 66.00   STD DEV: 4.52
Burkholderia multivorans ATCC 17616 chromosome 3, complete sequence - 1..919805
767 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 64.85	0	51..764	+	237	189347994	-	BMULJ_05363	-	carboxymethylenebutenolidase
2	 65.83	0	1001..1954	-	317	189347995	-	BMULJ_05364	-	LysR family transcriptional regulator
3	 69.36	0	2213..3511	-	432	189347996	purA	BMULJ_05365	-	adenylosuccinate synthase
4	 66.56	0	3655..4560	+	301	189347997	-	BMULJ_05366	-	LysR family transcriptional regulator
5	 64.08	0	4729..5037	-	102	189347998	-	BMULJ_05367	-	hypothetical protein
6	 60.52	-1	6691..8007	+	438	189347999	repA4	BMULJ_05368	-	replication protein
7	 63.94	0	8094..9119	-	341	189348000	parB4	BMULJ_05369	-	ParB family partition protein
8	 56.75	-2	9112..9807	-	231	189348001	parA4	BMULJ_05370	-	chromosome partitioning protein
9	 62.40	0	11065..12189	-	374	189348002	-	BMULJ_05371	-	putative Zn-dependent hydrolase of the beta-lactamase fold-like protein
10	 61.82	0	12271..12909	+	212	189348003	-	BMULJ_05372	-	TetR family transcriptional regulator
11	 65.85	0	13035..13526	+	163	189348004	-	BMULJ_05373	-	putative oxidoreductase
12	 62.22	0	13558..14142	-	194	189348005	-	BMULJ_05374	-	hypothetical protein
13	 68.95	0	14831..15487	+	218	189348006	proQ	BMULJ_05375	-	ProP effector
14	 60.75	-1	16045..16416	-	123	189348007	-	BMULJ_05376	-	glyoxalase/bleomycin resistance protein/dioxygenase
15	 68.14	0	16483..17091	-	202	189348008	-	BMULJ_05377	-	hypothetical protein
16	 64.55	0	17088..17513	-	141	189348009	-	BMULJ_05378	-	putative molybdopterin-binding protein
17	 70.25	0	17623..19131	-	502	189348010	tolC	BMULJ_05379	-	RND efflux system outer membrane lipoprotein
18	 69.25	0	19128..20093	-	321	189348011	-	BMULJ_05380	-	putative multidrug resistance efflux pump
19	 58.69	-1	20101..20313	-	70	189348012	-	BMULJ_05381	-	probable membrane protein
20	 69.48	0	20348..22480	-	710	189348013	-	BMULJ_05382	-	putative fusaric acid resistance efflux transporter permease protein
21	 70.00	0	22477..22956	-	159	189348014	slyA	BMULJ_05383	-	MarR family transcriptional regulator for hemolysin
22	 68.22	0	23360..24772	+	470	189348015	-	BMULJ_05384	-	transcriptional MocR family regulator
23	 71.40	+1	24890..25861	+	323	189348016	ilvA	BMULJ_05385	-	threonine dehydratase
24	 70.05	0	25863..26867	+	334	189348017	ocd	BMULJ_05386	-	ornithine cyclodeaminase
25	 67.58	0	26878..28086	+	402	189348018	pepQ	BMULJ_05387	-	X-Pro dipeptidase
26	 69.36	0	28091..29131	+	346	189348019	-	BMULJ_05388	-	deacylase
27	 64.97	0	29144..29614	+	156	189348020	-	BMULJ_05389	-	AsnC family transcriptional regulator
28	 68.36	0	29738..31216	+	492	189348021	gabD	BMULJ_05390	-	NADP-dependent succinate-semialdehyde dehydrogenase
29	 65.73	0	31237..32631	+	464	189348022	-	BMULJ_05391	-	putative adenosylmethionine-8-amino-7- oxononanoate aminotransferase
30	 74.07	+1	35828..37528	-	566	189348023	dak1	BMULJ_05394	-	dihydroxyacetone kinase
31	 69.24	0	37772..38899	-	375	189348024	-	BMULJ_05395	-	sigma54-dependent DNA-binding transcriptional regulator
32	 66.98	0	39194..40147	+	317	189348025	-	BMULJ_05396	-	LysR family transcriptional regulator
33	 67.09	0	40211..41620	+	469	189348026	sdh	BMULJ_05397	-	succinate dehydrogenase
34	 66.09	0	41607..42821	+	404	189348027	-	BMULJ_05398	-	4Fe-4S ferredoxin
35	 64.93	0	42876..44198	+	440	189348028	-	BMULJ_05399	-	permease of the major facilitator superfamily
36	 66.04	0	44429..45379	+	316	189348029	apbA	BMULJ_05400	-	2-dehydropantoate 2-reductase
37	 66.41	0	45376..45768	+	130	189348030	-	BMULJ_05401	-	glyoxalase family protein
38	 61.26	-1	45771..46232	+	153	189348031	-	BMULJ_05402	-	putative acyl dehydratase
39	 65.52	0	46232..47452	+	406	189348032	-	BMULJ_05403	-	formyl-CoA transferase
40	 67.25	0	47452..48312	+	286	189348033	aroE	BMULJ_05404	-	shikimate 5-dehydrogenase
41	 64.02	0	48454..49359	+	301	189348034	-	BMULJ_05405	-	LysR family transcriptional regulator
42	 60.77	-1	49636..50025	-	129	189348035	pcaC	BMULJ_05406	-	4-carboxymuconolactone decarboxylase
43	 63.77	0	50041..51453	-	470	189348036	-	BMULJ_05407	-	NCS1 family nucleobase:cation symporter-1
44	 67.01	0	51552..53021	-	489	189348037	-	BMULJ_05408	-	NAD-dependent aldehyde dehydrogenase
45	 64.16	0	53034..54071	-	345	189348038	-	BMULJ_05409	-	putative alkanal monooxygenase
46	 62.61	0	54083..55018	-	311	189348039	-	BMULJ_05410	-	FMN-binding monooxygenase
47	 66.54	0	55020..55838	-	272	189348040	-	BMULJ_05411	-	alpha/beta hydrolase
48	 64.34	0	55807..56409	-	200	189348041	-	BMULJ_05412	-	hypothetical protein
49	 63.23	0	56520..56810	+	96	189348042	-	BMULJ_05413	-	hypothetical protein
50	 67.74	0	56885..57631	+	248	189348043	-	BMULJ_05414	-	GntR family transcriptional regulator
51	 67.60	0	57820..58782	+	320	189348044	-	BMULJ_05415	-	putative nitrilotriacetate monooxygenase
52	 63.82	0	58930..59982	+	350	189348045	potD	BMULJ_05416	-	spermidine/putrescine transport system substrate-binding protein
53	 67.68	0	60124..61008	+	294	189348046	potB	BMULJ_05417	-	spermidine/putrescine transport system permease protein
54	 65.04	0	61010..61810	+	266	189348047	potC	BMULJ_05418	-	spermidine/putrescine transport system permease protein
55	 64.95	0	61822..62928	+	368	189348048	potA	BMULJ_05419	-	spermidine/putrescine transport system ATP-binding protein
56	 67.51	0	62940..63647	+	235	189348049	-	BMULJ_05420	-	GntR family transcriptional regulator
57	 57.88	-1	63692..64078	-	128	189348050	-	BMULJ_05421	-	MerR family transcriptional regulator
58	 63.92	0	64165..65109	+	314	189348051	-	BMULJ_05422	-	alpha/beta hydrolase
59	 67.54	0	65199..65996	-	265	189348052	fruR2	BMULJ_05423	-	DeoR family fructose operon transcriptional repressor
60	 66.27	0	66073..67074	-	333	189348053	pdxA	BMULJ_05424	-	4-hydroxythreonine-4-phosphate dehydrogenase
61	 70.36	0	67136..68434	-	432	189348054	-	BMULJ_05425	-	hypothetical protein
62	 65.55	0	68431..69411	-	326	189348055	kdgT	BMULJ_05426	-	2-keto-3-deoxygluconate permease
63	 68.60	0	69920..70489	+	189	189348056	-	BMULJ_05427	-	FMN reductase
64	 63.41	0	70517..71620	+	367	189348057	ssuD	BMULJ_05428	-	alkanesulfonate monooxygenase
65	 69.85	0	71674..72648	-	324	189348058	-	BMULJ_05429	-	LysR family transcriptional regulator
66	 68.76	0	72767..73624	+	285	189348059	-	BMULJ_05430	-	putative short-chain alcohol dehydrogenase
67	 67.61	0	73674..74096	-	140	189348060	-	BMULJ_05431	-	glyoxalase/bleomycin resistance protein
68	 68.82	0	74303..74674	-	123	189348061	-	BMULJ_05432	-	hypothetical protein
69	 63.78	0	74722..75171	-	149	189348062	-	BMULJ_05433	-	hypothetical protein
70	 70.11	0	75173..76393	-	406	189348063	-	BMULJ_05434	-	major facilitator family transporter
71	 68.71	0	76509..77537	+	342	189348064	-	BMULJ_05435	-	AraC subfamily transcriptional regulator
72	 67.92	0	77566..79077	-	503	189348065	-	BMULJ_05436	-	phospholipase C
73	 70.68	+1	79761..80906	-	381	189348066	-	BMULJ_05437	-	hypothetical protein
74	 67.43	0	81399..82964	-	521	189348067	-	BMULJ_05438	-	methyl-accepting chemotaxis protein
75	 60.65	-1	87600..88280	+	226	189348068	-	BMULJ_05442	-	ankyrin repeat protein
76	 60.36	-1	88324..88767	+	147	189348069	-	BMULJ_05443	-	hypothetical protein
77	 61.00	-1	88823..89281	+	152	189348070	-	BMULJ_05444	-	hypothetical protein
78	 62.20	0	89303..93535	+	1410	189348071	-	BMULJ_05445	-	Rhs family protein
79	 67.89	0	94985..95881	-	298	189348072	apbA	BMULJ_05446	-	2-dehydropantoate 2-reductase
80	 67.57	0	95983..96870	-	295	189348073	-	BMULJ_05447	-	LysR family transcriptional regulator
81	 69.14	0	97022..100093	+	1023	189348074	-	BMULJ_05448	-	FAD/FMN-containing dehydrogenase
82	 64.03	0	100373..100675	-	100	189348075	-	BMULJ_05449	-	hypothetical protein
83	 65.97	0	100762..101916	-	384	189348076	livK	BMULJ_05450	-	branched-chain amino acid transport system substrate-binding protein
84	 66.24	0	102480..103652	-	390	189348077	-	BMULJ_05451	-	outer membrane porin
85	 68.19	0	104639..105889	+	416	189348078	-	BMULJ_05452	-	permease of the major facilitator superfamily
86	 64.41	0	106011..106940	+	309	189348079	-	BMULJ_05453	-	LysR family transcriptional regulator
87	 64.44	0	107055..107549	+	164	189348080	-	BMULJ_05454	-	hypothetical protein
88	 64.31	0	107592..108611	+	339	189348081	-	BMULJ_05455	-	hypothetical protein
89	 67.35	0	108644..110110	+	488	189348082	-	BMULJ_05456	-	NAD-dependent aldehyde dehydrogenase
90	 70.60	+1	110118..111185	+	355	189348083	linF	BMULJ_05457	-	maleylacetate reductase
91	 66.09	0	111214..112086	+	290	189348084	-	BMULJ_05458	-	hydroxyquinol 1,2-dioxygenase
92	 66.03	0	112092..112403	+	103	189348085	-	BMULJ_05459	-	hypothetical protein
93	 68.15	0	112406..112741	+	111	189348086	-	BMULJ_05460	-	putative 4-nitrocatechol monooxygenase ferridoxin component
94	 62.99	0	112967..114055	+	362	189348087	-	BMULJ_05461	-	outer membrane porin
95	 68.02	0	114273..116126	-	617	189348088	-	BMULJ_05462	-	ATP-binding cassette
96	 65.43	0	116405..116971	+	188	189348089	-	BMULJ_05463	-	TetR family transcriptional regulator
97	 67.37	0	117204..117629	+	141	189348090	-	BMULJ_05464	-	regulator of disulfide bond formation
98	 67.63	0	117689..118723	+	344	189348091	aes	BMULJ_05465	-	esterase / lipase
99	 71.48	+1	119177..120235	+	352	189348092	linF	BMULJ_05466	-	maleylacetate reductase
100	 69.62	0	120579..120950	+	123	189348093	lrgA	BMULJ_05467	-	holin-like protein
66.00	MEAN

4.52	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.