IslandPath Analysis: Moorella thermoacetica ATCC 39073



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 56.01   STD DEV: 6.30
Moorella thermoacetica ATCC 39073, complete genome - 1..2628784
2465 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 52.90	0	90..227	-	45	83588875	rpmH	Moth_0001	-	50S ribosomal protein L34
2	 48.83	-1	450..1778	+	442	83588876	dnaA	Moth_0002	-	chromosomal replication initiation protein
3	 50.13	0	1894..3018	+	374	83588877	-	Moth_0003	-	DNA polymerase III, beta subunit
4	 55.91	0	3081..3266	+	61	83588878	-	Moth_0004	-	RNA-binding S4
5	 54.45	0	3229..4341	+	370	83588879	-	Moth_0005	-	DNA replication and repair protein RecF
6	 51.59	0	4494..4745	+	83	83588880	-	Moth_0006	-	YaaB
7	 53.44	0	4828..6732	+	634	83588881	-	Moth_0007	-	DNA gyrase, B subunit
8	 56.89	0	6840..9284	+	814	83588882	-	Moth_0008	-	DNA gyrase, A subunit
9	 59.26	0	9450..10340	+	296	83588883	-	Moth_0009	-	pyridoxine biosynthesis protein
10	 56.61	0	10357..10923	+	188	83588884	-	Moth_0010	-	glutamine amidotransferase subunit PdxT
11	 51.87	0	11247..12023	+	258	83588885	-	Moth_0011	-	DeoR family transcriptional regulator
12	 43.58	-1	12177..13103	+	308	83588886	-	Moth_0012	-	1-phosphofructokinase
13	 44.56	-1	13155..14543	+	462	83588887	-	Moth_0013	-	PTS fructose IIC component
14	 40.00	-2	14562..15026	+	154	83588888	-	Moth_0014	-	putative PTS IIA-like nitrogen-regulatory protein PtsN
15	 43.26	-2	15031..15312	+	93	83588889	-	Moth_0015	-	HPrNtr
16	 46.32	-1	15302..17011	+	569	83588890	-	Moth_0016	-	phosphoenolpyruvate--protein phosphotransferase
17	 56.82	0	17068..17646	-	192	83588891	-	Moth_0017	-	aminotransferase
18	 58.86	0	17764..18378	+	204	83588892	-	Moth_0018	-	phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase
19	 60.93	0	18887..20053	+	388	83588893	-	Moth_0019	-	Serine--glyoxylate transaminase
20	 61.72	0	20314..21891	+	525	83588894	-	Moth_0020	-	D-3-phosphoglycerate dehydrogenase
21	 59.97	0	21982..23265	+	427	83588895	-	Moth_0021	-	seryl-tRNA synthetase
22	 60.38	0	23270..24733	+	487	83588896	-	Moth_0022	-	periplasmic sensor signal transduction histidine kinase
23	 61.26	0	24705..25370	+	221	83588897	-	Moth_0023	-	two component LuxR family transcriptional regulator
24	 52.24	0	25493..26005	+	170	83588898	-	Moth_0024	-	hypothetical protein
25	 60.49	0	26638..27090	+	150	83588899	-	Moth_0025	-	tRNA-adenosine deaminase
26	 50.80	0	27244..28371	+	375	83588900	-	Moth_0026	-	DNA adenine methylase
27	 63.95	+1	29099..30868	+	589	83588901	-	Moth_0027	-	DNA polymerase III, subunits gamma and tau
28	 54.92	0	30893..31207	+	104	83588902	-	Moth_0028	-	hypothetical protein
29	 59.50	0	31211..31810	+	199	83588903	-	Moth_0029	-	DNA replication and repair protein RecR
30	 52.05	0	31896..32114	+	72	83588904	-	Moth_0030	-	hypothetical protein
31	 46.38	-1	32127..32402	+	91	83588905	-	Moth_0031	-	SigmaK-factor processing regulatory BofA
32	 61.84	0	32710..33186	+	158	83588906	-	Moth_0032	-	hypothetical protein
33	 59.98	0	33358..34449	+	363	83588907	-	Moth_0033	-	pyruvate flavodoxin/ferredoxin oxidoreductase-like
34	 59.75	0	34454..35248	+	264	83588908	-	Moth_0034	-	2-oxoglutarate synthase
35	 57.07	0	35232..35804	+	190	83588909	-	Moth_0035	-	2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate
36	 56.12	0	35801..36094	+	97	83588910	-	Moth_0036	-	4Fe-4S ferredoxin, iron-sulfur binding
37	 59.38	0	37930..39288	+	452	83588911	-	Moth_0038	-	FAD linked oxidase-like
38	 56.87	0	39307..40602	+	431	83588912	-	Moth_0039	-	hypothetical protein
39	 58.17	0	40737..41513	+	258	83588913	-	Moth_0040	-	polysaccharide deacetylase
40	 67.59	+1	41660..43069	+	469	83588914	-	Moth_0041	-	arginine decarboxylase
41	 64.10	+1	43166..43789	+	207	83588915	-	Moth_0042	-	thymidylate kinase
42	 60.00	0	43942..44796	+	284	83588916	-	Moth_0043	-	DNA-directed DNA polymerase
43	 57.08	0	44932..45651	+	239	83588917	-	Moth_0044	-	Signal peptidase II
44	 61.01	0	45641..45958	+	105	83588918	-	Moth_0045	-	hypothetical protein
45	 65.04	+1	45951..46874	+	307	83588919	-	Moth_0046	-	hypothetical protein
46	 53.10	0	46918..47175	-	85	83588920	-	Moth_0047	-	AbrB family transcriptional regulator
47	 57.52	0	47363..49318	+	651	83588921	-	Moth_0048	-	methionyl-tRNA synthetase
48	 64.20	+1	49319..50089	+	256	83588922	-	Moth_0049	-	TatD-related deoxyribonuclease
49	 59.75	0	50335..51303	+	322	83588923	-	Moth_0050	-	hypothetical protein
50	 57.55	0	51538..52425	+	295	83588924	-	Moth_0051	-	hypothetical protein
51	 58.02	0	52537..53403	+	288	83588925	-	Moth_0052	-	dimethyladenosine transferase
52	 54.32	0	53415..53900	+	161	83588926	-	Moth_0053	-	hypothetical protein
53	 57.38	0	54141..54926	-	261	83588927	-	Moth_0054	-	cell wall hydrolase, SleB
54	 58.81	0	55010..55849	-	279	83588928	-	Moth_0055	-	glycosyl transferase family protein
55	 52.97	0	56019..56894	+	291	83588929	-	Moth_0056	-	hypothetical protein
56	 48.91	-1	57038..57313	+	91	83588930	-	Moth_0057	-	hypothetical protein
57	 63.68	+1	57432..58235	+	267	83588931	-	Moth_0058	-	electron transfer flavoprotein subunit beta
58	 64.13	+1	58252..59277	+	341	83588932	-	Moth_0059	-	electron transfer flavoprotein alpha and beta-subunits
59	 61.82	0	59328..60626	+	432	83588933	-	Moth_0060	-	FAD dependent oxidoreductase
60	 55.56	0	60626..60904	+	92	83588934	-	Moth_0061	-	ferredoxin
61	 51.98	0	61051..61479	+	142	83588935	-	Moth_0062	-	Ferritin and Dps
62	 59.00	0	61613..62551	+	312	83588936	-	Moth_0063	-	glycoside hydrolase family protein
63	 57.31	0	62680..66195	-	1171	83588937	-	Moth_0064	-	pyruvate:ferredoxin (flavodoxin) oxidoreductase
64	 54.41	0	66390..67670	-	426	83588938	-	Moth_0065	-	hypothetical protein
65	 56.88	0	67876..68202	+	108	83588939	-	Moth_0066	-	ModE family transcriptional regulator
66	 51.61	0	68473..69375	+	300	83588940	-	Moth_0067	-	extracellular solute-binding protein
67	 59.21	0	69447..70184	+	245	83588941	-	Moth_0068	-	binding-protein dependent transport system inner membrane protein
68	 62.84	+1	70213..71283	+	356	83588942	-	Moth_0069	-	ABC transporter related
69	 54.78	0	71329..72018	+	229	83588943	-	Moth_0070	-	two component transcriptional regulator
70	 57.14	0	72015..72308	-	97	83588944	-	Moth_0071	-	hypothetical protein
71	 62.24	0	72508..73365	+	285	83588945	-	Moth_0072	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
72	 58.66	0	73381..74079	+	232	83588946	-	Moth_0073	-	GntR family transcriptional regulator
73	 61.35	0	74092..74844	+	250	83588947	-	Moth_0074	-	hypothetical protein
74	 58.57	0	75036..76418	+	460	83588948	-	Moth_0075	-	UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase
75	 58.00	0	76460..77428	+	322	83588949	-	Moth_0076	-	ribose-phosphate pyrophosphokinase
76	 58.07	0	77425..78087	-	220	83588950	-	Moth_0077	-	hypothetical protein
77	 55.66	0	78187..78813	+	208	83588951	-	Moth_0078	-	50S ribosomal protein L25/general stress protein Ctc
78	 60.21	0	79061..79633	+	190	83588952	-	Moth_0079	-	peptidyl-tRNA hydrolase
79	 65.05	+1	79716..80147	+	143	83588953	-	Moth_0080	-	hypothetical protein
80	 59.91	0	80294..83845	+	1183	83588954	-	Moth_0081	-	transcription-repair coupling factor
81	 56.91	0	83857..84768	+	303	83588955	-	Moth_0082	-	MscS mechanosensitive ion channel
82	 52.90	0	84931..85482	+	183	83588956	-	Moth_0083	-	AbrB family transcriptional regulator
83	 60.08	0	85566..87038	+	490	83588957	-	Moth_0084	-	MazG family protein
84	 56.52	0	87120..87395	+	91	83588958	-	Moth_0085	-	nucleoid protein Hbs
85	 61.48	0	87453..87722	+	89	83588959	-	Moth_0086	-	RNA-binding S4
86	 58.92	0	87793..88722	+	309	83588960	-	Moth_0087	-	sporulation protein and related proteins
87	 52.43	0	88792..89058	+	88	83588961	-	Moth_0088	-	hypothetical protein
88	 62.47	+1	89055..89531	+	158	83588962	-	Moth_0089	-	hypothetical protein
89	 57.20	0	89642..89884	+	80	83588963	-	Moth_0090	-	sigma-24 (FecI-like)
90	 53.91	0	89859..90203	+	114	83588964	-	Moth_0091	-	septum formation initiator
91	 53.94	0	90284..90676	+	130	83588965	-	Moth_0092	-	RNA binding S1
92	 67.12	+1	90757..91647	+	296	83588966	-	Moth_0093	-	Ppx/GppA phosphatase
93	 61.38	0	91644..92210	+	188	83588967	-	Moth_0094	-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
94	 63.60	+1	92267..93703	+	478	83588968	-	Moth_0095	-	3-octaprenyl-4hydroxybenzoate decarboxylase
95	 58.28	0	93690..94547	+	285	83588969	-	Moth_0096	-	4-hydroxybenzoate octaprenyltransferase
96	 60.59	0	94586..95572	+	328	83588970	-	Moth_0097	-	NLPA lipoprotein
97	 62.89	+1	95569..96309	+	246	83588971	-	Moth_0098	-	ABC transporter related
98	 59.19	0	96607..97368	+	253	83588972	-	Moth_0099	-	binding-protein dependent transport system inner membrane protein
99	 66.90	+1	97527..97949	+	140	83588973	-	Moth_0100	-	hypothetical protein
100	 60.90	0	97882..98766	-	294	83588974	-	Moth_0101	-	ErfK/YbiS/YcfS/YnhG
56.01	MEAN

6.30	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.