IslandPath Analysis: Azorhizobium caulinodans ORS 571



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.41   STD DEV: 3.33
Azorhizobium caulinodans ORS 571, complete genome - 1..5369772
4717 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 64.38	0	351..1268	+	305	158421625	-	AZC_0001	-	hypothetical protein
2	 70.10	0	1265..1876	+	203	158421626	-	AZC_0002	-	putative maf protein
3	 67.61	0	1873..2718	+	281	158421627	-	AZC_0003	-	quinate shikimate 5-dehydrogenase
4	 68.62	0	2723..3337	+	204	158421628	-	AZC_0004	-	dephospho-CoA kinase
5	 65.56	0	3341..4063	+	240	158421629	-	AZC_0005	-	DNA polymerase III
6	 63.40	-1	4153..4581	+	142	158421630	-	AZC_0006	-	ferric uptake regulation protein
7	 70.06	0	4578..5462	+	294	158421631	-	AZC_0007	-	phospholipid/glycerol acyltransferase
8	 66.95	0	5584..6978	+	464	158421632	-	AZC_0008	-	hypothetical protein
9	 67.08	0	6975..8174	+	399	158421633	-	AZC_0009	-	phosphate starvation inducible protein
10	 68.75	0	8233..8712	+	159	158421634	-	AZC_0010	-	hypothetical protein
11	 65.15	0	8734..9720	+	328	158421635	-	AZC_0011	-	HlyC/CorC family transporter
12	 67.16	0	9734..11341	+	535	158421636	-	AZC_0012	-	apolipoprotein N-acyltransferase
13	 63.58	-1	11440..11892	+	150	158421637	-	AZC_0013	-	putative transcriptional regulator
14	 66.50	0	11981..13174	+	397	158421638	-	AZC_0014	-	S-adenosylmethionine synthetase
15	 67.39	0	13367..14059	+	230	158421639	-	AZC_0015	-	tRNA (guanine-N7)-methyltransferase
16	 69.77	0	14157..15059	+	300	158421640	lysR	AZC_0016	-	putative transcriptional regulator
17	 68.59	0	15401..16390	+	329	158421641	-	AZC_0017	-	hypothetical protein
18	 67.04	0	16390..17988	+	532	158421642	nusA	AZC_0018	-	transcription elongation factor NusA
19	 69.32	0	18010..18726	+	238	158421643	-	AZC_0019	-	hypothetical protein
20	 71.20	+1	18723..21899	+	1058	158421644	-	AZC_0020	-	initiation factor 2 protein
21	 68.95	0	22131..22568	+	145	158421645	-	AZC_0021	-	ribosome-binding factor A
22	 71.99	+1	22568..23656	+	362	158421646	-	AZC_0022	-	tRNA pseudouridine synthase B
23	 63.60	-1	23689..25350	+	553	158421647	-	AZC_0023	-	putative oligopeptide ABC transporter
24	 66.28	0	25773..26543	-	256	158421648	-	AZC_0024	-	putative ABC transporter permease protein
25	 69.38	0	26540..27424	-	294	158421649	-	AZC_0025	-	ABC transporter
26	 63.08	-1	27643..28701	-	352	158421650	-	AZC_0026	-	hypothetical protein
27	 68.02	0	28797..29981	-	394	158421651	-	AZC_0027	-	cysteine synthase
28	 62.09	-1	30024..30701	+	225	158421652	marR	AZC_0028	-	putative transcriptional regulator
29	 66.47	0	30815..31822	+	335	158421653	-	AZC_0029	-	putative zinc-binding dehydrogenase
30	 67.83	0	31868..32296	+	142	158421654	-	AZC_0030	-	hypothetical protein
31	 69.28	0	32599..35883	-	1094	158421655	-	AZC_0031	-	bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
32	 67.73	0	35923..36297	+	124	158421656	-	AZC_0032	-	leucine-responsive regulatory protein
33	 69.43	0	36399..36869	+	156	158421657	-	AZC_0033	-	putative MaoC-like dehydratase
34	 68.09	0	36908..37612	+	234	158421658	-	AZC_0034	-	putative glutathione S-transferase
35	 66.42	0	37661..38899	-	412	158421659	-	AZC_0035	-	putative periplasmic protein
36	 71.87	+1	39314..46714	+	2466	158421660	-	AZC_0036	-	putative fatty acid synthase transmembrane protein
37	 67.99	0	46711..48075	+	454	158421661	-	AZC_0037	-	aminotransferase class I protein
38	 69.80	0	48093..48857	+	254	158421662	-	AZC_0038	-	putative short-chain dehydrogenase
39	 63.52	-1	49017..50222	+	401	158421663	wcbD	AZC_0039	-	WcbD protein
40	 63.23	-1	50219..51061	+	280	158421664	-	AZC_0040	-	putative capsule polysaccharide export inner-membrane protein
41	 65.71	0	51058..52308	+	416	158421665	wcbD	AZC_0041	-	WcbD protein
42	 63.23	-1	52317..53015	+	232	158421666	wzt	AZC_0042	-	putative ABC-2 transporter
43	 63.14	-1	53082..54158	-	358	158421667	fkbM	AZC_0043	-	putative methyltransferase
44	 58.91	-2	54255..54383	+	42	158421668	-	AZC_0044	-	hypothetical protein
45	 62.28	-1	54406..55500	-	364	158421669	-	AZC_0045	-	hypothetical protein
46	 66.02	0	55673..57070	-	465	158421670	-	AZC_0046	-	glycosyltransferase
47	 70.24	0	57345..58745	+	466	158421671	-	AZC_0047	-	putative glycosyltransferase
48	 64.73	0	58811..59533	+	240	158421672	-	AZC_0048	-	putative CDP-alcohol phosphatidyltransferase
49	 67.64	0	59670..60692	+	340	158421673	-	AZC_0049	-	hypothetical protein
50	 57.27	-2	60784..61911	-	375	158421674	wbpY	AZC_0050	-	putative glycosyltransferase
51	 58.54	-2	61908..64343	-	811	158421675	-	AZC_0051	-	putative glycosyltransferase
52	 63.44	-1	64367..65605	-	412	158421676	-	AZC_0052	-	S-adenosyl-dependent methyl transferase
53	 66.87	0	65771..66748	-	325	158421677	-	AZC_0053	-	GDP-6-deoxy-D-lyxo-4-hexulose reductase
54	 64.11	0	66752..67729	-	325	158421678	-	AZC_0054	-	GDP-mannose 4,6-dehydratase
55	 63.39	-1	67996..69003	-	335	158421679	-	AZC_0055	-	hypothetical protein
56	 67.52	0	69126..70532	-	468	158421680	-	AZC_0056	-	cytochrome P450
57	 65.83	0	70625..72052	-	475	158421681	-	AZC_0057	-	GDP-mannose 1-phosphate guanylyltransferase
58	 67.18	0	72227..72811	-	194	158421682	-	AZC_0058	-	cobalamin adenosyltransferase
59	 61.03	-1	72830..73024	-	64	158421683	-	AZC_0059	-	hypothetical protein
60	 67.79	0	73266..74600	+	444	158421684	-	AZC_0060	-	general substrate transporter
61	 66.72	0	74861..76906	+	681	158421685	-	AZC_0061	-	methyl-accepting chemotaxis sensory transducer precursor
62	 67.46	0	77105..79129	+	674	158421686	-	AZC_0062	-	methyl-accepting chemotaxis sensory transducer precursor
63	 66.36	0	79264..81534	-	756	158421687	-	AZC_0063	-	polynucleotide phosphorylase/polyadenylase
64	 61.85	-1	81867..82136	-	89	158421688	-	AZC_0064	-	ribosomal protein S15
65	 70.41	0	82367..83248	-	293	158421689	-	AZC_0065	-	hypothetical protein
66	 66.21	0	83252..84553	-	433	158421690	-	AZC_0066	-	putative flavoprotein involved in K+ transport
67	 68.10	0	84570..84848	-	92	158421691	-	AZC_0067	-	hypothetical protein
68	 71.08	+1	84850..86028	-	392	158421692	-	AZC_0068	-	glycosyltransferase
69	 71.28	+1	86025..86999	-	324	158421693	-	AZC_0069	-	putative selenophosphate synthetase-related protein
70	 69.63	0	86999..87538	-	179	158421694	-	AZC_0070	-	putative histone acetyltransferase
71	 69.11	0	87538..88518	-	326	158421695	-	AZC_0071	-	biotin synthase-related enzyme
72	 66.94	0	88580..89662	-	360	158421696	-	AZC_0072	-	putative amidohydrolase
73	 64.80	0	89840..90322	-	160	158421697	-	AZC_0073	-	hypothetical protein
74	 70.83	+1	90637..92052	+	471	158421698	gntR	AZC_0074	-	putative transcriptional regulator
75	 68.80	0	92086..92694	-	202	158421699	-	AZC_0075	-	hypothetical protein
76	 67.04	0	93103..94164	+	353	158421700	-	AZC_0076	-	putative hemolysin
77	 72.65	+1	94306..95091	-	261	158421701	-	AZC_0077	-	hypothetical protein
78	 67.10	0	95251..96849	-	532	158421702	-	AZC_0078	-	malate synthase
79	 69.74	0	96908..97624	-	238	158421703	-	AZC_0079	-	thiamine monophosphate synthase
80	 67.65	0	97665..98990	-	441	158421704	-	AZC_0080	-	glycolate oxidase
81	 70.66	0	98987..99862	-	291	158421705	-	AZC_0081	-	hypothetical protein
82	 73.51	+1	99859..101070	-	403	158421706	glcE	AZC_0082	-	glycolate oxidase subunit protein
83	 66.60	0	101086..102645	-	519	158421707	glcD	AZC_0083	-	glycolate oxidase subunit protein
84	 70.09	0	102741..103676	+	311	158421708	lysR	AZC_0084	-	transcriptional regulator
85	 68.34	0	103742..104458	+	238	158421709	azlC	AZC_0085	-	putative branched-chain amino acid transport protein
86	 68.54	0	104487..104753	+	88	158421710	-	AZC_0086	-	hypothetical protein
87	 68.17	0	104768..105631	-	287	158421711	-	AZC_0087	-	hypothetical protein
88	 74.67	+2	105649..106398	-	249	158421712	-	AZC_0088	-	hypothetical protein
89	 70.37	0	106632..107171	-	179	158421713	-	AZC_0089	-	hypothetical protein
90	 65.94	0	107300..107986	+	228	158421714	-	AZC_0090	-	response regulator receiver
91	 71.64	+1	108065..108547	+	160	158421715	-	AZC_0091	-	cyclic nucleotide-binding protein
92	 67.81	0	108562..108999	+	145	158421716	-	AZC_0092	-	hypothetical protein
93	 66.21	0	109021..109893	-	290	158421717	-	AZC_0093	-	exodeoxyribonuclease III protein
94	 67.93	0	109936..110331	-	131	158421718	-	AZC_0094	-	hypothetical protein
95	 69.65	0	110372..111445	-	357	158421719	-	AZC_0095	-	putative outer membrane lipoprotein-sorting protein
96	 69.98	0	111605..114049	-	814	158421720	ftsK	AZC_0096	-	FtsK protein
97	 70.14	0	114063..115271	-	402	158421721	-	AZC_0097	-	putative aspartate aminotransferase
98	 68.19	0	115469..116455	-	328	158421722	-	AZC_0098	-	riboflavin kinase
99	 70.11	0	116518..117564	-	348	158421723	-	AZC_0099	-	HAD-superfamily hydrolase
100	 67.04	0	117655..118461	+	268	158421724	-	AZC_0100	-	hypothetical protein
67.41	MEAN

3.33	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.