IslandPath Analysis: Burkholderia multivorans ATCC 17616



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 66.81   STD DEV: 4.63
Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence - 1..3448466
3146 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 65.78	0	74..1648	+	524	161523181	-	Bmul_0001	-	chromosomal replication initiation protein
2	 63.78	0	1817..2923	+	368	161523182	-	Bmul_0002	-	DNA polymerase III subunit beta
3	 63.35	0	3115..5589	+	824	161523183	-	Bmul_0003	-	DNA gyrase subunit B
4	 58.98	-1	5706..6746	-	346	161523184	-	Bmul_0004	-	restriction endonuclease
5	 63.11	0	7465..7998	-	177	161523185	-	Bmul_0005	-	cytochrome B561
6	 70.79	0	7995..9086	-	363	161523186	-	Bmul_0006	-	catalase domain-containing protein
7	 68.40	0	9242..9760	+	172	161523187	-	Bmul_0007	-	ECF subfamily RNA polymerase sigma-24 factor
8	 68.64	0	9757..10518	+	253	161523188	-	Bmul_0008	-	putative transmembrane anti-sigma factor
9	 57.66	-1	10913..11878	-	321	161523189	-	Bmul_0009	-	hypothetical protein
10	 55.44	-2	11875..12774	-	299	161523190	-	Bmul_0010	-	hypothetical protein
11	 58.53	-1	13024..14142	-	372	161523191	-	Bmul_0011	-	hypothetical protein
12	 59.59	-1	14239..15312	-	357	161523192	-	Bmul_0012	-	hypothetical protein
13	 56.99	-2	15309..16889	-	526	161523193	-	Bmul_0013	-	hypothetical protein
14	 61.18	-1	16892..17638	-	248	161523194	-	Bmul_0014	-	hypothetical protein
15	 65.09	0	17601..18044	-	147	161523195	-	Bmul_0015	-	IstB ATP binding domain-containing protein
16	 58.59	-1	18095..19456	-	453	161523196	-	Bmul_0016	-	transposase IS116/IS110/IS902 family protein
17	 61.25	-1	19878..20246	-	122	161523197	-	Bmul_0017	-	IstB ATP binding domain-containing protein
18	 66.08	0	20251..21783	-	510	161523198	-	Bmul_0018	-	integrase catalytic region
19	 63.06	0	21939..24131	-	730	161523199	-	Bmul_0019	-	type VI secretion system Vgr family protein
20	 67.13	0	25082..25951	-	289	161523200	-	Bmul_0020	-	RNA polymerase sigma factor SigJ
21	 66.24	0	25951..26424	-	157	161523201	-	Bmul_0021	-	alkylhydroperoxidase
22	 63.17	0	26732..27046	+	104	161523202	-	Bmul_0022	-	hypothetical protein
23	 68.15	0	27051..28265	+	404	161523203	-	Bmul_0023	-	hypothetical protein
24	 68.05	0	28249..29262	+	337	161523204	-	Bmul_0024	-	hypothetical protein
25	 69.76	0	29507..29797	+	96	161523205	-	Bmul_0025	-	hypothetical protein
26	 69.02	0	29853..30107	+	84	161523206	-	Bmul_0026	-	hypothetical protein
27	 68.85	0	30314..30679	+	121	161523207	-	Bmul_0027	-	hypothetical protein
28	 68.09	0	30898..33924	-	1008	161523208	-	Bmul_0028	-	type III restriction protein res subunit
29	 67.92	0	33924..35990	-	688	161523209	-	Bmul_0029	-	site-specific DNA-methyltransferase (adenine-specific)
30	 60.87	-1	36347..37036	+	229	161523210	-	Bmul_0030	-	two component LuxR family transcriptional regulator
31	 63.40	0	37084..38217	-	377	161523211	-	Bmul_0031	-	outer membrane protein (porin)-like protein
32	 67.40	0	38493..39170	-	225	161523212	-	Bmul_0032	-	two component transcriptional regulator
33	 69.88	0	39184..40551	-	455	161523213	-	Bmul_0033	-	integral membrane sensor signal transduction histidine kinase
34	 67.25	0	40637..41494	-	285	161523214	-	Bmul_0034	-	binding-protein-dependent transport systems inner membrane component
35	 65.66	0	41511..42308	-	265	161523215	-	Bmul_0035	-	ABC transporter related
36	 67.76	0	42416..43420	-	334	161523216	-	Bmul_0036	-	NMT1/THI5-like domain-containing protein
37	 60.49	-1	43984..44469	+	161	161523217	-	Bmul_0037	-	abortive infection protein
38	 68.20	0	44568..45350	-	260	161523218	-	Bmul_0038	-	flagellar biosynthetic protein FliR
39	 69.23	0	45374..45646	-	90	161523219	-	Bmul_0039	-	flagellar biosynthesis protein FliQ
40	 65.75	0	45663..46424	-	253	161523220	-	Bmul_0040	-	flagellar biosynthesis protein FliP
41	 76.04	+1	46466..47041	-	191	161523221	-	Bmul_0041	-	flagellar biosynthesis protein FliO
42	 68.54	0	47038..47517	-	159	161523222	-	Bmul_0042	-	flagellar motor switch protein FliN
43	 63.46	0	47510..48508	-	332	161523223	-	Bmul_0043	-	flagellar motor switch protein FliM
44	 68.16	0	48531..49064	-	177	161523224	-	Bmul_0044	-	flagellar basal body-associated protein FliL
45	 68.33	0	49143..49865	-	240	161523225	-	Bmul_0045	-	LrgB family protein
46	 74.27	+1	49891..50337	-	148	161523226	-	Bmul_0046	-	LrgA family protein
47	 69.36	0	50477..51403	+	308	161523227	-	Bmul_0047	-	LysR family transcriptional regulator
48	 66.86	0	51492..53054	-	520	161523228	-	Bmul_0048	-	EmrB/QacA family drug resistance transporter
49	 68.30	0	53215..53703	-	162	161523229	-	Bmul_0049	-	MarR family transcriptional regulator
50	 71.74	+1	53877..54152	+	91	161523230	-	Bmul_0050	-	hypothetical protein
51	 71.34	0	54348..55931	+	527	161523231	-	Bmul_0051	-	RND efflux system outer membrane lipoprotein
52	 72.24	+1	55977..56765	-	262	161523232	-	Bmul_0052	-	hypothetical protein
53	 69.03	0	56797..57303	-	168	161523233	-	Bmul_0053	-	general secretion pathway M protein
54	 73.49	+1	57300..58706	-	468	161523234	-	Bmul_0054	-	general secretion pathway protein L
55	 71.11	0	58731..59855	-	374	161523235	-	Bmul_0055	-	general secretion pathway protein K
56	 71.41	0	59862..60557	-	231	161523236	-	Bmul_0056	-	putative general secretion pathway protein J
57	 70.78	0	60535..60972	-	145	161523237	-	Bmul_0057	-	general secretion pathway protein I
58	 72.51	+1	60975..61607	-	210	161523238	-	Bmul_0058	-	general secretion pathway protein H
59	 63.13	0	61647..62099	-	150	161523239	-	Bmul_0059	-	general secretion pathway protein G
60	 72.75	+1	62277..62687	+	136	161523240	-	Bmul_0060	-	hypothetical protein
61	 68.80	0	62718..63935	-	405	161523241	-	Bmul_0061	-	general secretion pathway protein F
62	 68.74	0	63940..65436	-	498	161523242	-	Bmul_0062	-	general secretory pathway protein E
63	 67.31	0	65433..67760	-	775	161523243	-	Bmul_0063	-	general secretion pathway protein D
64	 63.09	0	68123..68569	+	148	161523244	-	Bmul_0064	-	lytic transglycosylase catalytic
65	 67.20	0	68733..70034	+	433	161523245	-	Bmul_0065	-	cobalamin synthesis protein P47K
66	 60.57	-1	70150..70428	-	92	161523246	-	Bmul_0066	-	histone family protein DNA-binding protein
67	 70.92	0	70818..72791	+	657	161523247	-	Bmul_0067	-	5-methylaminomethyl-2-thiouridine methyltransferase
68	 64.68	0	73325..74680	+	451	161523248	-	Bmul_0068	-	sodium/hydrogen exchanger
69	 63.08	0	74698..75813	+	371	161523249	-	Bmul_0069	-	carboxylate-amine ligase
70	 68.23	0	76324..76962	+	212	161523250	-	Bmul_0070	-	MarR family transcriptional regulator
71	 69.34	0	76991..77701	+	236	161523251	-	Bmul_0071	-	glutamine amidotransferase
72	 69.36	0	77885..78997	+	370	161523252	-	Bmul_0072	-	NADH:flavin oxidoreductase/NADH oxidase
73	 61.05	-1	79203..79736	+	177	161523253	-	Bmul_0073	-	nuclear protein SET
74	 69.37	0	79780..81261	-	493	161523254	-	Bmul_0074	-	integral membrane sensor signal transduction histidine kinase
75	 65.22	0	81392..82084	-	230	161523255	-	Bmul_0075	-	two component transcriptional regulator
76	 59.39	-1	82178..82438	+	86	161523256	-	Bmul_0076	-	hypothetical protein
77	 61.81	-1	82547..82855	-	102	161523257	-	Bmul_0077	-	pterin-4-alpha-carbinolamine dehydratase
78	 67.90	0	82972..83946	-	324	161523258	-	Bmul_0078	-	phenylalanine 4-monooxygenase
79	 66.05	0	84005..84490	+	161	161523259	-	Bmul_0079	-	AsnC family transcriptional regulator
80	 68.54	0	84581..85114	-	177	161523260	-	Bmul_0080	-	adenylate cyclase
81	 70.93	0	85253..86191	-	312	161523261	-	Bmul_0081	-	LysR family transcriptional regulator
82	 68.68	0	86400..88136	+	578	161523262	-	Bmul_0082	-	glucose-methanol-choline oxidoreductase
83	 65.00	0	88572..89351	+	259	161523263	-	Bmul_0083	-	ABC transporter related
84	 66.40	0	89348..90103	+	251	161523264	-	Bmul_0084	-	ABC transporter related
85	 63.83	0	90180..91379	+	399	161523265	-	Bmul_0085	-	branched chain amino acid ABC transporter periplasmic ligand-binding protein
86	 64.86	0	91512..92396	+	294	161523266	-	Bmul_0086	-	inner-membrane translocator
87	 67.08	0	92396..93370	+	324	161523267	-	Bmul_0087	-	inner-membrane translocator
88	 62.28	0	93418..94374	+	318	161523268	-	Bmul_0088	-	hypothetical protein
89	 66.23	0	94451..95608	+	385	161523269	-	Bmul_0089	-	extracellular ligand-binding receptor
90	 66.95	0	95798..96853	+	351	161523270	-	Bmul_0090	-	inner-membrane translocator
91	 67.39	0	96858..98642	+	594	161523271	-	Bmul_0091	-	ABC transporter related
92	 67.33	0	98642..99397	+	251	161523272	-	Bmul_0092	-	ABC transporter related
93	 65.96	0	99741..101711	+	656	161523273	-	Bmul_0093	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
94	 64.92	0	101708..102394	+	228	161523274	-	Bmul_0094	-	methyltransferase GidB
95	 63.85	0	102447..103226	+	259	161523275	-	Bmul_0095	-	cobyrinic acid ac-diamide synthase
96	 66.11	0	103257..104150	+	297	161523276	-	Bmul_0096	-	parB-like partition protein
97	 68.07	0	104158..105294	+	378	161523277	-	Bmul_0097	-	citrate transporter
98	 61.79	-1	105422..105667	+	81	161523278	-	Bmul_0098	-	hypothetical protein
99	 66.10	0	105882..106406	+	174	161523279	-	Bmul_0099	-	F0F1-type ATP synthase subunit I-like protein
100	 61.27	-1	106517..107368	+	283	161523280	-	Bmul_0100	-	F0F1 ATP synthase subunit A
66.81	MEAN

4.63	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.