IslandPath Analysis: Acinetobacter baumannii ACICU



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 39.53   STD DEV: 4.01
Acinetobacter baumannii ACICU, complete genome - 1..3904116
3667 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 38.46	0	76..465	-	129	184156321	-	ACICU_00001	-	soluble cytochrome b562
2	 41.76	0	506..2974	-	822	184156322	gyrB	ACICU_00002	-	Type IIA topoisomerase (DNA gyrase/topo II)
3	 39.43	0	3027..4109	-	360	184156323	-	ACICU_00003	-	recombinational DNA repair ATPase (RecF pathway)
4	 39.16	0	4124..5272	-	382	184156324	-	ACICU_00004	-	DNA polymerase sliding clamp subunit
5	 39.84	0	5370..6767	-	465	184156325	-	ACICU_00005	-	ATPase
6	 40.74	0	7384..7572	+	62	184156326	-	ACICU_00006	-	putative 50S ribosomal protein L34
7	 38.42	0	7602..7994	+	130	184156327	-	ACICU_00007	-	RNase P protein component
8	 42.06	0	8005..8325	+	106	184156328	-	ACICU_00008	-	hypothetical protein
9	 41.28	0	8331..10091	+	586	184156329	-	ACICU_00009	-	preprotein translocase subunit YidC
10	 42.92	0	10182..11537	+	451	184156330	-	ACICU_00010	-	GTPase
11	 34.85	-1	11583..11846	-	87	184156331	-	ACICU_00011	-	hypothetical protein
12	 38.50	0	11904..12890	+	328	184156332	-	ACICU_00012	-	Co/Zn/Cd efflux system component
13	 36.05	0	12986..13684	+	232	184156333	-	ACICU_00013	-	protein-disulfide isomerase
14	 40.87	0	13738..13989	-	83	184156334	-	ACICU_00014	-	hypothetical protein
15	 38.45	0	14161..14688	-	175	184156335	-	ACICU_00015	-	hypoxanthine-guanine phosphoribosyltransferase
16	 41.93	0	14903..16228	-	441	184156336	-	ACICU_00016	-	cytosine deaminase
17	 42.05	0	16285..17340	-	351	184156337	-	ACICU_00017	-	phenylpropionate dioxygenase
18	 41.43	0	17631..18791	-	386	184156338	-	ACICU_00018	-	glutathionylspermidine synthase
19	 29.81	-2	19315..19938	+	207	184156339	-	ACICU_00019	-	hypothetical protein
20	 39.69	0	19990..20886	-	298	184156340	-	ACICU_00020	-	membrane protein TerC
21	 36.52	0	21262..21858	-	198	184156341	-	ACICU_00021	-	membrane-associated phospholipid phosphatase
22	 40.93	0	21994..23244	+	416	184156342	-	ACICU_00022	-	hypothetical protein
23	 44.25	+1	23314..24687	-	457	184156343	-	ACICU_00023	-	UDP-N-acetylmuramate-alanine ligase
24	 39.62	0	24926..25291	+	121	184156344	-	ACICU_00024	-	hypothetical protein
25	 45.22	+1	25475..25987	+	170	184156345	-	ACICU_00025	-	phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
26	 41.18	0	25997..27118	+	373	184156346	-	ACICU_00026	-	phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
27	 42.46	0	27806..29098	+	430	184156347	-	ACICU_00027	-	membrane-bound lytic murein transglycosylase B
28	 30.67	-2	29148..29522	-	124	184156348	-	ACICU_00028	-	hypothetical protein
29	 33.66	-1	29636..30541	-	301	184156349	-	ACICU_00029	-	hypothetical protein
30	 30.56	-2	30881..31528	-	215	184156350	-	ACICU_00030	-	hypothetical protein
31	 40.65	0	31976..33916	-	646	184156351	-	ACICU_00031	-	molecular chaperone
32	 40.54	0	34070..34624	-	184	184156352	-	ACICU_00032	-	molecular chaperone GrpE (heat shock protein)
33	 38.14	0	34788..35681	-	297	184156353	-	ACICU_00033	-	transcriptional regulator
34	 38.75	0	35789..36655	+	288	184156354	-	ACICU_00034	-	Zn-dependent hydrolase, including glyoxylase
35	 45.45	+1	37047..37277	+	76	184156355	-	ACICU_00035	-	hypothetical protein
36	 37.91	0	37988..39058	+	356	184156356	-	ACICU_00036	-	esterase/lipase
37	 37.63	0	39192..39749	+	185	184156357	-	ACICU_00037	-	peptidyl-prolyl cis-trans isomerase
38	 36.36	0	45574..45936	+	120	184156358	-	ACICU_00038	-	hypothetical protein
39	 35.91	0	45982..46524	-	180	184156359	-	ACICU_00039	-	flavoprotein
40	 38.51	0	46659..47141	-	160	184156360	-	ACICU_00040	-	FKBP-type peptidyl-prolyl cis-trans isomerase 2
41	 38.04	0	47143..47673	-	176	184156361	-	ACICU_00041	-	lipoprotein signal peptidase
42	 42.28	0	47666..50503	-	945	184156362	-	ACICU_00042	-	isoleucyl-tRNA synthetase
43	 41.22	0	50565..51566	-	333	184156363	-	ACICU_00043	-	FAD synthase
44	 40.30	0	51775..52908	+	377	184156364	-	ACICU_00044	-	tellurite resistance protein
45	 39.15	0	52989..53555	+	188	184156365	-	ACICU_00045	-	nucleoside phosphorylase
46	 41.22	0	53590..54210	-	206	184156366	-	ACICU_00046	-	transcriptional regulator
47	 40.07	0	54471..55271	-	266	184156367	-	ACICU_00047	-	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
48	 43.73	+1	55285..56082	-	265	184156368	-	ACICU_00048	-	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
49	 45.49	+1	56079..57254	-	391	184156369	-	ACICU_00049	-	coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
50	 44.92	+1	57281..58264	-	327	184156370	-	ACICU_00050	-	ABC-type nitrate/sulfonate/bicarbonate transport system protein, periplasmic component
51	 41.90	0	58336..59304	-	322	184156371	-	ACICU_00051	-	alkanesulfonate transport protein
52	 40.49	0	59638..60993	-	451	184156372	-	ACICU_00052	-	acetylglutamate kinase
53	 39.25	0	61114..61434	-	106	184156373	-	ACICU_00053	-	hypothetical protein
54	 45.50	+1	61657..62067	-	136	184156374	-	ACICU_00054	-	hypothetical protein
55	 43.37	0	62285..63031	-	248	184156375	-	ACICU_00055	-	dehydrogenase
56	 42.20	0	63097..63795	-	232	184156376	-	ACICU_00056	-	phosphatase
57	 42.72	0	63795..64508	-	237	184156377	-	ACICU_00057	-	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
58	 40.94	0	64688..65305	+	205	184156378	-	ACICU_00058	-	Thiol-disulfide isomerase and thioredoxin
59	 32.87	-1	65383..66030	-	215	184156379	-	ACICU_00059	-	transcriptional regulator
60	 41.78	0	66167..66805	-	212	184156380	-	ACICU_00060	-	transcriptional regulator
61	 42.20	0	66979..68004	+	341	184156381	-	ACICU_00061	-	flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1
62	 39.16	0	68029..69177	+	382	184156382	-	ACICU_00062	-	Fatty acid desaturase
63	 43.24	0	69336..70052	+	238	184156383	-	ACICU_00063	-	RNase PH
64	 41.77	0	70341..72509	+	722	184156384	-	ACICU_00064	-	phospholipase C
65	 39.88	0	72931..73098	+	55	184156385	-	ACICU_00065	-	hypothetical protein
66	 43.14	0	73095..73940	-	281	184156386	-	ACICU_00066	-	nicotinate-nucleotide pyrophosphorylase
67	 39.47	0	74112..74681	+	189	184156387	-	ACICU_00067	-	negative regulator of beta-lactamase expression
68	 42.15	0	74763..76304	+	513	184156388	-	ACICU_00068	-	uncharacterized membrane protein, putative virulence factor
69	 37.21	0	76350..77045	-	231	184156389	-	ACICU_00069	-	FKBP-type peptidyl-prolyl cis-trans isomerase 1
70	 40.80	0	77095..77817	-	240	184156390	-	ACICU_00070	-	FKBP-type peptidyl-prolyl cis-trans isomerase 1
71	 36.21	0	78010..80196	-	728	184156391	-	ACICU_00071	-	ATPase
72	 38.93	0	80216..80644	-	142	184156392	-	ACICU_00072	-	protein-tyrosine-phosphatase
73	 39.06	0	80649..81749	-	366	184156393	-	ACICU_00073	-	periplasmic protein
74	 37.57	0	82105..83379	+	424	184156394	-	ACICU_00074	-	UDP-N-acetyl-D-mannosaminuronate dehydrogenase
75	 36.04	0	83426..84424	+	332	184156395	-	ACICU_00075	-	nucleoside-diphosphate sugar epimerase
76	 36.35	0	84426..85586	+	386	184156396	-	ACICU_00076	-	pyridoxal phosphate-dependent enzyme
77	 41.85	0	85589..86281	+	230	184156397	-	ACICU_00077	-	CMP-N-acetylneuraminic acid synthetase
78	 38.62	0	86285..87382	+	365	184156398	-	ACICU_00078	-	spore coat polysaccharide biosynthesis protein, glycosyltransferase
79	 35.66	0	87376..87891	+	171	184156399	-	ACICU_00079	-	acetyltransferase
80	 39.81	0	87893..88942	+	349	184156400	-	ACICU_00080	-	sialic acid synthase
81	 30.66	-2	88942..90174	+	410	184156401	-	ACICU_00081	-	membrane protein
82	 26.54	-2	90177..91619	+	480	184156402	-	ACICU_00082	-	hypothetical protein
83	 25.85	-2	91953..92687	+	244	184156403	-	ACICU_00083	-	hypothetical protein
84	 24.51	-2	92936..93547	+	203	184156404	-	ACICU_00084	-	hypothetical protein
85	 27.59	-2	93576..94376	+	266	184156405	-	ACICU_00085	-	hypothetical protein
86	 34.74	-1	94376..95086	+	236	184156406	-	ACICU_00086	-	glycosyltransferase
87	 38.46	0	95374..95841	+	155	184156407	-	ACICU_00087	-	sugar transferase
88	 38.36	0	95867..96742	+	291	184156408	-	ACICU_00088	-	UDP-glucose pyrophosphorylase
89	 38.16	0	96858..98120	+	420	184156409	-	ACICU_00089	-	UDP-glucose 6-dehydrogenase
90	 38.00	0	98117..99787	+	556	184156410	-	ACICU_00090	-	glucose-6-phosphate isomerase
91	 38.64	0	99780..100796	+	338	184156411	-	ACICU_00091	-	UDP-glucose 4-epimerase
92	 40.55	0	100840..102210	-	456	184156412	-	ACICU_00092	-	phosphomannomutase
93	 42.84	0	102585..104246	+	553	184156413	-	ACICU_00093	-	L-lactate permease
94	 45.29	+1	104266..105018	+	250	184156414	-	ACICU_00094	-	transcriptional regulator
95	 46.88	+1	105015..106166	+	383	184156415	-	ACICU_00095	-	L-lactate dehydrogenase (FMN-dependent)
96	 43.10	0	106467..108197	+	576	184156416	-	ACICU_00096	-	FAD/FMN-containing dehydrogenase
97	 42.80	0	108246..109460	-	404	184156417	-	ACICU_00097	-	aspartate/tyrosine/aromatic aminotransferase
98	 43.88	+1	109976..110686	+	236	184156418	-	ACICU_00098	-	transcriptional regulator
99	 45.54	+1	110679..111563	+	294	184156419	-	ACICU_00099	-	PEP phosphonomutase
100	 44.99	+1	111630..112787	+	385	184156420	-	ACICU_00100	-	citrate synthase
39.53	MEAN

4.01	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.