IslandPath Analysis: Burkholderia multivorans ATCC 17616



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.12   STD DEV: 4.16
Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence - 1..2473162
2130 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 64.89	0	1..1182	+	393	189351979	smc	BMULJ_03196	-	SMC protein
2	 65.88	0	1323..2336	-	337	189351980	-	BMULJ_03197	-	tyrosine recombinase
3	 67.96	0	2443..2829	-	128	189351981	-	BMULJ_03198	-	putative serine/threonine protein kinase
4	 69.77	0	2955..3566	-	203	189351982	-	BMULJ_03199	-	XRE family transcriptional regulator
5	 66.08	0	3732..4931	+	399	189351983	kbl	BMULJ_03200	-	glycine C-acetyltransferase
6	 63.65	0	4945..5973	+	342	189351984	tdh	BMULJ_03201	-	threonine 3-dehydrogenase
7	 66.99	0	6673..7299	+	208	189351985	-	BMULJ_03202	-	TetR family transcriptional regulator
8	 64.58	0	7353..7832	+	159	189351986	-	BMULJ_03203	-	hypothetical protein
9	 66.67	0	8371..9456	-	361	189351987	ttuC	BMULJ_03204	-	tartrate dehydrogenase
10	 67.97	0	9578..10501	+	307	189351988	-	BMULJ_03205	-	LysR family transcriptional regulator
11	 66.44	0	10820..11254	-	144	189351989	-	BMULJ_03206	-	hypothetical protein
12	 67.31	0	11926..12390	-	154	189351990	-	BMULJ_03207	-	hypothetical protein
13	 66.17	0	12451..13668	-	405	189351991	-	BMULJ_03208	-	patatin-like phospholipase
14	 64.25	0	13665..14450	-	261	189351992	bdh	BMULJ_03209	-	3-hydroxybutyrate dehydrogenase
15	 62.75	-1	14501..15241	-	246	189351993	adc	BMULJ_03210	-	acetoacetate decarboxylase
16	 70.10	0	15677..16258	+	193	189351994	-	BMULJ_03211	-	membrane-associated phospholipid phosphatase
17	 63.11	0	16315..16539	-	74	189351995	-	BMULJ_03212	-	hypothetical protein
18	 69.86	0	16712..17524	-	270	189351996	-	BMULJ_03213	-	putative siderophore-interacting protein
19	 70.52	0	17559..18311	-	250	189351997	-	BMULJ_03214	-	PadR-like family transcriptional regulator
20	 68.04	0	18514..19170	+	218	189351998	-	BMULJ_03215	-	hypothetical protein
21	 67.63	0	19246..19968	-	240	189351999	kduD	BMULJ_03216	-	2-deoxy-D-gluconate 3-dehydrogenase
22	 70.59	0	19946..21067	-	373	189352000	gutB	BMULJ_03217	-	L-iditol 2-dehydrogenase
23	 67.73	0	21069..22379	-	436	189352001	-	BMULJ_03218	-	permease of the major facilitator superfamily
24	 60.30	-1	22398..22931	-	177	189352002	-	BMULJ_03219	-	2,4'-dihydroxyacetophenone dioxygenase
25	 67.99	0	23105..24085	+	326	189352003	-	BMULJ_03220	-	AraC family transcriptional regulator
26	 65.82	0	24148..25095	-	315	189352004	-	BMULJ_03221	-	NADP-dependent aryl-alcohol dehydrogenase
27	 67.95	0	25390..26010	-	206	189352005	-	BMULJ_03222	-	putative LysE family lysine efflux permease
28	 69.46	0	26110..27003	+	297	189352006	iciA	BMULJ_03223	-	LysR family chromosome initiation inhibitor
29	 65.33	0	27073..27819	-	248	189352007	fnr	BMULJ_03224	-	CRP/FNR family anaerobic regulatory protein
30	 66.67	0	28037..28513	-	158	189352008	uspA	BMULJ_03225	-	UspA family universal stress protein
31	 71.05	0	28849..29259	-	136	189352009	-	BMULJ_03226	-	hypothetical protein
32	 62.82	-1	29538..29771	+	77	189352010	-	BMULJ_03227	-	hypothetical protein
33	 68.30	0	29908..30828	+	306	189352011	cysE	BMULJ_03228	-	serine O-acetyltransferase
34	 68.78	0	30989..31792	-	267	189352012	-	BMULJ_03229	-	putative short-chain alcohol dehydrogenase
35	 64.13	0	31793..32422	-	209	189352013	folE	BMULJ_03230	-	GTP cyclohydrolase I
36	 67.85	0	32512..33438	-	308	189352014	pcaR	BMULJ_03231	-	LysR family transcriptional regulator
37	 68.69	0	33600..34832	+	410	189352015	pobA	BMULJ_03232	-	p-hydroxybenzoate 3-monooxygenase
38	 66.95	0	34976..35689	+	237	189352016	pcaI	BMULJ_03233	-	3-oxoadipate CoA-transferase alpha subunit
39	 66.06	0	35709..36362	+	217	189352017	pcaJ	BMULJ_03234	-	3-oxoadipate CoA-transferase beta subunit
40	 71.76	+1	36443..37798	+	451	189352018	purB	BMULJ_03235	-	adenylosuccinate lyase
41	 68.07	0	37816..38601	+	261	189352019	pcaD	BMULJ_03236	-	3-oxoadipate enol lactonase
42	 64.60	0	38612..38998	+	128	189352020	pcaC	BMULJ_03237	-	4-carboxymuconolactone decarboxylase
43	 67.18	0	39168..40526	+	452	189352021	pcaK	BMULJ_03238	-	4-hydroxybenzoate transporter
44	 65.86	0	40697..40945	-	82	189352022	-	BMULJ_03239	-	hypothetical protein
45	 65.05	0	41049..41666	-	205	189352023	-	BMULJ_03240	-	putative threonine efflux protein
46	 61.59	-1	41901..42176	+	91	189352024	-	BMULJ_03241	-	hypothetical protein
47	 67.44	0	42188..43225	+	345	189352025	-	BMULJ_03242	-	CDF family cation efflux system protein
48	 66.67	0	43222..43413	+	63	189352026	-	BMULJ_03243	-	predicted Fe-S protein
49	 59.62	-1	44117..44272	-	51	189352027	-	BMULJ_03244	-	hypothetical protein
50	 68.15	0	44474..45148	+	224	189352028	-	BMULJ_03245	-	phosphoglycerate mutase family protein
51	 68.70	0	45180..46211	+	343	189352029	-	BMULJ_03246	-	putative aminoglycoside phosphotransferase
52	 65.49	0	46255..47019	+	254	189352030	cbr	BMULJ_03247	-	NADPH-dependent carbonyl reductase
53	 68.77	0	47027..47785	+	252	189352031	fabG	BMULJ_03248	-	3-oxoacyl-[acyl-carrier protein] reductase
54	 66.91	0	47820..49064	+	414	189352032	acd	BMULJ_03249	-	acyl-CoA dehydrogenase
55	 66.11	0	49163..50059	+	298	189352033	-	BMULJ_03250	-	LysR family transcriptional regulator
56	 62.52	-1	50069..50791	-	240	189352034	-	BMULJ_03251	-	GntR family transcriptional regulator
57	 67.72	0	50841..51887	-	348	189352035	prdF	BMULJ_03252	-	proline racemase
58	 68.89	0	51900..53381	-	493	189352036	betB	BMULJ_03253	-	betaine-aldehyde dehydrogenase
59	 68.77	0	53407..54690	-	427	189352037	dadA	BMULJ_03254	-	D-amino-acid dehydrogenase
60	 65.98	0	54696..55712	-	338	189352038	prdF	BMULJ_03255	-	proline racemase
61	 64.05	0	55770..56648	-	292	189352039	dapA	BMULJ_03256	-	dihydrodipicolinate synthase
62	 62.61	-1	56682..57347	-	221	189352040	-	BMULJ_03257	-	polar amino acid transport system permease protein
63	 64.88	0	57358..58029	-	223	189352041	-	BMULJ_03258	-	polar amino acid transport system permease protein
64	 63.93	0	58040..58879	-	279	189352042	-	BMULJ_03259	-	polar amino acid transport system ATP-binding protein
65	 65.11	0	58974..59807	-	277	189352043	-	BMULJ_03260	-	ABC amino acid transporter periplasmic ligand-binding protein
66	 64.86	0	60193..61302	-	369	189352044	-	BMULJ_03261	-	conserved DnaJ-class molecular chaperone
67	 67.63	0	61368..63743	-	791	189352045	polB	BMULJ_03262	-	DNA polymerase II
68	 70.13	0	63858..65444	-	528	189352046	-	BMULJ_03263	-	EAL domain (diguanylate phosphodiesterase) protein
69	 71.70	+1	65828..66145	-	105	189352047	-	BMULJ_03264	-	hypothetical protein
70	 73.27	+1	66535..67185	+	216	189352048	-	BMULJ_03265	-	putative dihydroxyacid dehydratase/phosphogluconate dehydratase
71	 64.15	0	67346..67663	+	105	189352049	groES	BMULJ_03266	-	chaperonin GroES
72	 67.22	0	67744..69366	+	540	189352050	groEL	BMULJ_03267	-	chaperonin GroEL
73	 67.82	0	69491..70360	-	289	189352051	-	BMULJ_03268	-	hypothetical protein
74	 68.21	0	70432..71337	-	301	189352052	-	BMULJ_03269	-	Mn-containing catalase
75	 67.12	0	71706..73043	+	445	189352053	-	BMULJ_03270	-	Nramp family metal ion transporter
76	 67.36	0	73108..73542	-	144	189352054	-	BMULJ_03271	-	predicted phosphatase/phosphohexomutase
77	 69.90	0	73869..75227	-	452	189352055	ndh	BMULJ_03272	-	NADH dehydrogenase
78	 67.67	0	75385..76284	+	299	189352056	-	BMULJ_03273	-	LysR family transcriptional regulator
79	 71.67	+1	76312..76491	-	59	189352057	-	BMULJ_03274	-	hypothetical protein
80	 70.71	0	76687..77625	+	312	189352058	-	BMULJ_03275	-	AraC family transcriptional regulator
81	 71.32	+1	77793..78674	+	293	189352059	-	BMULJ_03276	-	predicted nucleoside-diphosphate-sugar epimerase
82	 67.50	0	78735..79931	-	398	189352060	benE	BMULJ_03277	-	benzoate membrane transport protein
83	 68.42	0	80048..81073	-	341	189352061	-	BMULJ_03278	-	fatty acid desaturase domain protein
84	 69.33	0	81400..82224	+	274	189352062	-	BMULJ_03279	-	putative ABC phosphate/phosphonate transporter periplasmic ligand-binding protein
85	 67.17	0	82251..83645	-	464	189352063	dbpA	BMULJ_03280	-	ATP-independent RNA helicase
86	 61.62	-1	83642..83839	-	65	189352064	-	BMULJ_03281	-	hypothetical protein
87	 63.78	0	84285..84872	-	195	189352065	-	BMULJ_03282	-	hypothetical protein
88	 71.47	+1	85364..86299	-	311	189352066	-	BMULJ_03283	-	LysR family transcriptional regulator
89	 70.26	0	86404..87627	+	407	189352067	allC	BMULJ_03284	-	allantoate amidohydrolase
90	 65.17	0	87785..88252	+	155	189352068	-	BMULJ_03285	-	hypothetical protein
91	 71.07	0	88380..89219	+	279	189352069	fabG	BMULJ_03286	-	3-oxoacyl-[acyl-carrier protein] reductase
92	 70.64	0	89338..90117	-	259	189352070	surE	BMULJ_03287	-	5'-nucleotidase
93	 69.00	0	90419..90718	-	99	189352071	-	BMULJ_03288	-	hypothetical protein
94	 69.12	0	90711..91445	-	244	189352072	-	BMULJ_03289	-	branched-chain amino acid permease
95	 64.92	0	91570..92028	+	152	189352073	-	BMULJ_03290	-	AsnC family transcriptional regulator
96	 65.09	0	92160..92729	+	189	189352074	-	BMULJ_03291	-	hypothetical protein
97	 67.27	0	92869..93201	-	110	189352075	-	BMULJ_03292	-	hypothetical protein
98	 75.17	+1	93246..94679	-	477	189352076	-	BMULJ_03293	-	permease of the major facilitator superfamily
99	 67.63	0	94679..95407	-	242	189352077	-	BMULJ_03294	-	hypothetical protein
100	 69.72	0	95602..95928	+	108	189352078	trxA	BMULJ_03295	-	thioredoxin 1
67.12	MEAN

4.16	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.