version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 51.52 0 190..255 + 21 16127995 thrL b0001 - thr operon leader peptide 2 53.07 0 337..2799 + 820 16127996 thrA b0002 - fused aspartokinase I and homoserine dehydrogenase I 3 56.27 +1 2801..3733 + 310 16127997 thrB b0003 - homoserine kinase 4 52.84 0 3734..5020 + 428 16127998 thrC b0004 - threonine synthase 5 53.87 0 5234..5530 + 98 16127999 yaaX b0005 - predicted protein 6 49.68 0 5683..6459 - 258 16128000 yaaA b0006 - conserved protein 7 53.32 0 6529..7959 - 476 16128001 yaaJ b0007 - predicted transporter 8 51.99 0 8238..9191 + 317 16128002 talB b0008 - transaldolase B 9 54.42 0 9306..9893 + 195 16128003 mog b0009 - predicted molybdochelatase 10 53.09 0 9928..10494 - 188 16128004 yaaH b0010 - conserved inner membrane protein associated with acetate transport 11 50.84 0 10643..11356 - 237 16128005 yaaW b0011 - conserved protein 12 48.89 0 11382..11786 - 134 16128007 yaaI b0013 - predicted protein 13 51.12 0 12163..14079 + 638 16128008 dnaK b0014 - chaperone Hsp70, co-chaperone with DnaJ 14 55.17 0 14168..15298 + 376 16128009 dnaJ b0015 - chaperone Hsp40, co-chaperone with DnaK 15 51.93 0 15445..16557 + 370 16128010 insL b0016 - IS186/IS421 transposase 16 51.43 0 16751..16960 - 69 16128012 mokC b0018 - regulatory protein for HokC, overlaps CDS of hokC 17 52.94 0 16751..16903 - 50 49175991 hokC b4412 - toxic membrane protein, small 18 51.41 0 17489..18655 + 388 16128013 nhaA b0019 - sodium-proton antiporter 19 47.46 0 18715..19620 + 301 16128014 nhaR b0020 - DNA-binding transcriptional activator 20 54.56 0 19811..20314 - 167 16128015 insB b0021 - IS1 transposase InsAB' 21 52.90 0 20233..20508 - 91 16128016 insA b0022 - KpLE2 phage-like element; IS1 repressor protein InsA 22 46.59 0 20815..21078 - 87 16128017 rpsT b0023 - 30S ribosomal subunit protein S20 23 48.86 0 21181..21399 + 72 16128018 yaaY b0024 - predicted protein 24 53.61 0 21407..22348 + 313 16128019 ribF b0025 - bifunctional riboflavin kinase/FAD synthetase 25 55.77 0 22391..25207 + 938 16128020 ileS b0026 - isoleucyl-tRNA synthetase 26 53.54 0 25207..25701 + 164 16128021 lspA b0027 - prolipoprotein signal peptidase (signal peptidase II) 27 54.44 0 25826..26275 + 149 16128022 fkpB b0028 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 28 55.10 0 26277..27227 + 316 16128023 ispH b0029 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein 29 56.28 +1 27293..28207 + 304 16128024 rihC b0030 - ribonucleoside hydrolase 3 30 53.41 0 28374..29195 + 273 16128025 dapB b0031 - dihydrodipicolinate reductase 31 53.35 0 29651..30799 + 382 16128026 carA b0032 - carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 32 56.27 +1 30817..34038 + 1073 16128027 carB b0033 - carbamoyl-phosphate synthase large subunit 33 45.96 -1 34300..34695 + 131 90111079 caiF b0034 - DNA-binding transcriptional activator 34 54.99 0 34781..35371 - 196 90111080 caiE b0035 - predicted acyl transferase 35 52.35 0 35377..36270 - 297 16128030 caiD b0036 - crotonobetainyl CoA hydratase 36 50.99 0 36271..37839 - 522 49175993 caiC b0037 - predicted crotonobetaine CoA ligase:carnitine CoA ligase 37 52.63 0 37898..39115 - 405 16128032 caiB b0038 - crotonobetainyl CoA:carnitine CoA transferase 38 53.89 0 39244..40386 - 380 16128033 caiA b0039 - crotonobetaine reductase subunit II, FAD-binding 39 51.82 0 40417..41931 - 504 16128034 caiT b0040 - predicted transporter 40 52.53 0 42403..43173 + 256 90111081 fixA b0041 - predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain 41 56.69 +1 43188..44129 + 313 16128036 fixB b0042 - predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein 42 54.93 0 44180..45466 + 428 16128037 fixC b0043 - predicted oxidoreductase with FAD/NAD(P)-binding domain 43 56.94 +1 45463..45750 + 95 16128038 fixX b0044 - predicted 4Fe-4S ferredoxin-type protein 44 53.30 0 45807..47138 + 443 16128039 yaaU b0045 - predicted transporter 45 54.61 0 47246..47776 + 176 16128040 kefF b0046 - flavoprotein subunit for the KefC potassium efflux system 46 55.50 0 47769..49631 + 620 16128041 kefC b0047 - potassium:proton antiporter 47 52.71 0 49823..50302 + 159 16128042 folA b0048 - dihydrofolate reductase 48 55.75 0 50380..51222 - 280 16128043 apaH b0049 - diadenosine tetraphosphatase 49 51.85 0 51229..51606 - 125 16128044 apaG b0050 - protein associated with Co2+ and Mg2+ efflux 50 53.04 0 51609..52430 - 273 16128045 ksgA b0051 - S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase 51 56.36 +1 52427..53416 - 329 16128046 pdxA b0052 - 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent 52 53.85 0 53416..54702 - 428 16128047 surA b0053 - peptidyl-prolyl cis-trans isomerase (PPIase) 53 51.38 0 54755..57109 - 784 16128048 imp b0054 - exported protein required for envelope biosynthesis and integrity 54 52.70 0 57364..58179 + 271 16128049 djlA b0055 - DnaJ-like protein, membrane anchored 55 53.94 0 59687..60346 - 219 16128052 rluA b0058 - pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) 56 54.90 0 60358..63264 - 968 16128053 hepA b0059 - RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) 57 55.36 0 63429..65780 - 783 16128054 polB b0060 - DNA polymerase II 58 55.32 0 65855..66550 - 231 16128055 araD b0061 - L-ribulose-5-phosphate 4-epimerase 59 55.49 0 66835..68337 - 500 16128056 araA b0062 - L-arabinose isomerase 60 58.02 +1 68348..70048 - 566 16128057 araB b0063 - L-ribulokinase 61 52.56 0 70387..71265 + 292 16128058 araC b0064 - DNA-binding transcriptional dual regulator 62 53.86 0 71351..72115 + 254 16128059 yabI b0065 - conserved inner membrane protein 63 57.08 +1 72229..72927 - 232 16128060 thiQ b0066 - thiamin transporter subunit 64 58.41 +1 72911..74521 - 536 16128061 thiP b0067 - fused thiamin transporter subunits of ABC superfamily: membrane components 65 53.25 0 74497..75480 - 327 16128062 tbpA b0068 - thiamin transporter subunit 66 54.89 0 75644..77299 - 551 16128063 sgrR b0069 - DNA-binding transcriptional regulator 67 48.52 0 77621..78799 + 392 49175994 setA b0070 - broad specificity sugar efflux system 68 51.49 0 78848..79453 - 201 16128065 leuD b0071 - 3-isopropylmalate isomerase subunit 69 55.75 0 79464..80864 - 466 16128066 leuC b0072 - 3-isopropylmalate isomerase subunit, dehydratase component 70 55.49 0 80867..81958 - 363 90111082 leuB b0073 - 3-isopropylmalate dehydrogenase 71 52.99 0 81958..83529 - 523 16128068 leuA b0074 - 2-isopropylmalate synthase 72 47.13 0 83622..83708 - 28 16128069 leuL b0075 - leu operon leader peptide 73 45.71 -1 84368..85312 + 314 90111083 leuO b0076 - DNA-binding transcriptional activator 74 52.93 0 85630..87354 + 574 90111084 ilvI b0077 - acetolactate synthase III, large subunit 75 50.20 0 87357..87848 + 163 16128071 ilvH b0078 - acetolactate synthase III, thiamin-dependent, small subunit 76 54.93 0 88028..89032 + 334 16128073 fruR b0080 - DNA-binding transcriptional dual regulator 77 52.07 0 89634..90092 + 152 16128074 mraZ b0081 - conserved protein 78 55.20 0 90094..91035 + 313 16128075 mraW b0082 - S-adenosyl-dependent methyltransferase activity on membrane-located substrates 79 50.27 0 91032..91397 + 121 16128076 ftsL b0083 - membrane bound cell division protein at septum containing leucine zipper motif 80 53.99 0 91413..93179 + 588 16128077 ftsI b0084 - transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 81 56.59 +1 93166..94653 + 495 16128078 murE b0085 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase 82 55.11 0 94650..96008 + 452 16128079 murF b0086 - UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase 83 53.37 0 96002..97084 + 360 16128080 mraY b0087 - phospho-N-acetylmuramoyl-pentapeptide transferase 84 54.90 0 97087..98403 + 438 16128081 murD b0088 - UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 85 53.01 0 98403..99647 + 414 16128082 ftsW b0089 - integral membrane protein involved in stabilizing FstZ ring during cell division 86 56.09 +1 99644..100711 + 355 16128083 murG b0090 - N-acetylglucosaminyl transferase 87 54.74 0 100765..102240 + 491 16128084 murC b0091 - UDP-N-acetylmuramate:L-alanine ligase 88 51.57 0 102233..103153 + 306 16128085 ddlB b0092 - D-alanine:D-alanine ligase 89 53.31 0 103155..103985 + 276 16128086 ftsQ b0093 - membrane anchored protein involved in growth of wall at septum 90 52.10 0 103982..105244 + 420 16128087 ftsA b0094 - ATP-binding cell division protein involved in recruitment of FtsK to Z ring 91 54.17 0 105305..106456 + 383 16128088 ftsZ b0095 - GTP-binding tubulin-like cell division protein 92 51.09 0 106557..107474 + 305 16128089 lpxC b0096 - UDP-3-O-acyl N-acetylglucosamine deacetylase 93 54.00 0 107705..108217 + 170 90111085 secM b0097 - regulator of secA translation 94 52.40 0 108279..110984 + 901 16128091 secA b0098 - preprotein translocase subunit, ATPase 95 49.23 0 111044..111433 + 129 16128092 mutT b0099 - nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP 96 51.52 0 111649..111846 - 65 16128094 yacG b0101 - conserved protein 97 51.48 0 111856..112599 - 247 16128095 yacF b0102 - conserved protein 98 52.66 0 112599..113219 - 206 16128096 coaE b0103 - dephospho-CoA kinase 99 51.34 0 113444..114487 + 347 16128097 guaC b0104 - GMP reductase 100 51.95 0 114522..115724 - 400 16128099 hofC b0106 - assembly protein in type IV pilin biogenesis, transmembrane protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0