version 1.0
Salmonella enterica enterica sv Newport str. SL254, complete sequence - 1..176473 190 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 52.41 0 323..862 + 179 134047144 - SNSL254_pSN254_0001 - hypothetical protein 2 57.29 0 867..1154 + 95 134047134 - SNSL254_pSN254_0002 - hypothetical protein 3 52.02 0 1175..2239 + 354 134047215 repA SNSL254_pSN254_0003 - plasmid replication protein RepA 4 43.26 -1 2585..2866 + 93 134047218 - SNSL254_pSN254_0004 - hypothetical protein 5 49.89 0 3276..3710 - 144 134047132 - SNSL254_pSN254_0005 - hypothetical protein 6 52.34 0 3728..4711 - 327 134047153 - SNSL254_pSN254_0006 - phosphoadenosine phosphosulfate reductase family protein 7 52.17 0 5307..5720 + 137 134047155 - SNSL254_pSN254_0007 - hypothetical protein 8 51.53 0 5725..6246 + 173 134047200 - SNSL254_pSN254_0008 - hypothetical protein 9 51.72 0 6249..6770 + 173 134047216 - SNSL254_pSN254_0009 - hypothetical protein 10 54.01 0 6867..7340 + 157 134047086 - SNSL254_pSN254_0010 - hypothetical protein 11 55.44 0 7351..7644 + 97 134047223 - SNSL254_pSN254_0011 - hypothetical protein 12 52.05 0 7649..8503 + 284 134047268 - SNSL254_pSN254_0012 - hypothetical protein 13 54.19 0 8485..9462 + 325 134047167 - SNSL254_pSN254_0013 - signal peptide peptidase SppA domain-containing protein 14 53.43 0 9478..10338 + 286 134047262 - SNSL254_pSN254_0014 - DSBA-like thioredoxin domain-containing protein 15 52.91 0 10372..10800 + 142 134047263 - SNSL254_pSN254_0015 - putative lipoprotein 16 53.89 0 10857..11216 + 119 134047090 - SNSL254_pSN254_0016 - hypothetical protein 17 51.23 0 11216..11662 + 148 134047212 - SNSL254_pSN254_0017 - hypothetical protein 18 54.53 0 11659..12177 + 172 134047154 - SNSL254_pSN254_0018 - hypothetical protein 19 52.81 0 12177..12407 + 76 134047235 - SNSL254_pSN254_0019 - hypothetical protein 20 52.33 0 12394..13251 + 285 134047244 - SNSL254_pSN254_0020 - hypothetical protein 21 53.98 0 13482..14009 + 175 134047145 - SNSL254_pSN254_0021 - nuclease domain-containing protein 22 52.75 0 14067..14339 + 90 134047232 hup SNSL254_pSN254_0022 - DNA-binding protein HU 23 48.64 0 14427..14720 + 97 134047206 - SNSL254_pSN254_0023 - hypothetical protein 24 52.81 0 14747..15049 - 100 134047213 - SNSL254_pSN254_0024 - hypothetical protein 25 49.86 0 15054..15404 - 116 134047109 - SNSL254_pSN254_0025 - hypothetical protein 26 53.01 0 15567..16115 + 182 134047121 - SNSL254_pSN254_0026 - hypothetical protein 27 51.28 0 16456..16650 + 64 134047091 - SNSL254_pSN254_0027 - hypothetical protein 28 50.27 0 16661..17032 + 123 134047168 - SNSL254_pSN254_0028 - hypothetical protein 29 51.17 0 17025..17495 + 156 134047261 - SNSL254_pSN254_0029 - hypothetical protein 30 50.89 0 17510..17845 - 111 134047228 - SNSL254_pSN254_0030 - hypothetical protein 31 52.15 0 17942..18430 + 162 134047230 - SNSL254_pSN254_0031 - hypothetical protein 32 52.41 0 18433..18930 + 165 134047198 - SNSL254_pSN254_0032 - hypothetical protein 33 53.25 0 19145..19867 - 240 134047087 insB1 SNSL254_pSN254_0033 - transposase InsB1 for insertion sequence IS26 34 56.06 0 19896..20093 - 65 134047173 - SNSL254_pSN254_0034 - hypothetical protein 35 53.25 0 20382..21104 + 240 134047092 insB2 SNSL254_pSN254_0035 - transposase InsB2 for insertion sequence IS26 36 65.04 +2 21138..21629 - 163 134047139 - SNSL254_pSN254_0036 - hypothetical protein 37 67.48 +2 21736..22473 + 245 134047193 - SNSL254_pSN254_0037 - resolvase 38 60.78 +1 22905..24398 + 497 134047191 insA SNSL254_pSN254_0038 - transposase InsA 39 64.75 +2 24429..25313 + 294 134047124 - SNSL254_pSN254_0039 - hypothetical protein 40 58.52 +1 25530..26744 + 404 134047163 floR SNSL254_pSN254_0040 - florfenicol/chloramphenicol resistance protein FloR 41 58.17 0 26772..27077 + 101 134047131 - SNSL254_pSN254_0041 - transcriptional regulator, LysR family protein 42 62.43 +1 27344..28618 - 424 134047112 tetA SNSL254_pSN254_0042 - tetracycline repressor protein TetA, class A 43 62.68 +1 28622..29299 + 225 134047255 tetR SNSL254_pSN254_0043 - tetracycline repressor protein R, class A 44 72.02 +2 29331..29573 - 80 134047104 - SNSL254_pSN254_0044 - hypothetical protein 45 56.08 0 29879..30709 - 276 134047221 strB SNSL254_pSN254_0045 - streptomycin resistance protein StrB 46 56.22 0 30715..31518 - 267 134047125 strA SNSL254_pSN254_0046 - streptomycin resistance protein StrA 47 60.78 +1 31579..32394 - 271 134047177 sul2 SNSL254_pSN254_0047 - dihydropteroate synthase 2 48 53.53 0 32701..33012 + 103 134047229 - SNSL254_pSN254_0048 - hypothetical protein 49 53.56 0 33186..33971 + 261 134047169 - SNSL254_pSN254_0049 - putative ParA partition protein 50 50.08 0 33975..35156 + 393 134047105 - SNSL254_pSN254_0050 - putative ParB partition protein 51 46.59 -1 35199..35477 + 92 134047247 - SNSL254_pSN254_0051 - hypothetical protein 52 52.20 0 35530..36165 - 211 134047269 - SNSL254_pSN254_0052 - hypothetical protein 53 51.85 0 36727..37104 + 125 134047210 - SNSL254_pSN254_0053 - hypothetical protein 54 51.41 0 37353..38027 + 224 134047148 - SNSL254_pSN254_0054 - hypothetical protein 55 53.85 0 38020..38526 + 168 134047257 - SNSL254_pSN254_0055 - hypothetical protein 56 50.64 0 38532..38843 + 103 134047088 - SNSL254_pSN254_0056 - hypothetical protein 57 49.50 0 38852..39352 + 166 134047256 - SNSL254_pSN254_0057 - hypothetical protein 58 52.94 0 39356..40783 + 475 134047186 - SNSL254_pSN254_0058 - C-5 cytosine-specific DNA methylase family protein 59 51.60 0 40783..41439 + 218 134047162 - SNSL254_pSN254_0059 - hypothetical protein 60 51.94 0 41495..42112 + 205 134047238 - SNSL254_pSN254_0060 - hypothetical protein 61 44.09 -1 42345..42623 + 92 134047270 - SNSL254_pSN254_0061 - hypothetical protein 62 49.28 0 42714..43202 - 162 134047174 - SNSL254_pSN254_0062 - hypothetical protein 63 54.13 0 43217..45409 - 730 134047127 topB SNSL254_pSN254_0063 - DNA topoisomerase III 64 53.24 0 45624..46241 - 205 134047182 - SNSL254_pSN254_0064 - putative lipoprotein 65 53.68 0 46409..49381 + 990 134047158 traI SNSL254_pSN254_0065 - type IV conjugative transfer system protein TraI 66 53.48 0 49378..51243 + 621 134047236 traD SNSL254_pSN254_0066 - type IV conjugative transfer system protein TraD 67 49.91 0 51254..51838 + 194 134047096 - SNSL254_pSN254_0067 - hypothetical protein 68 52.54 0 51795..52424 + 209 134047224 - SNSL254_pSN254_0068 - putative type IV conjugative transfer system coupling factor 69 49.66 0 52434..52880 + 148 134047258 - SNSL254_pSN254_0069 - hypothetical protein 70 49.74 0 52890..53267 + 125 134047170 - SNSL254_pSN254_0070 - hypothetical protein 71 48.39 0 53339..53929 + 196 134047099 - SNSL254_pSN254_0071 - hypothetical protein 72 50.27 0 54265..54630 + 121 134047242 - SNSL254_pSN254_0072 - hypothetical protein 73 53.55 0 54775..55056 + 93 134047157 traL SNSL254_pSN254_0073 - type IV conjugative transfer system protein TraL 74 49.60 0 55053..55679 + 208 134047205 traE SNSL254_pSN254_0074 - type IV conjugative transfer system protein TraE 75 54.14 0 55663..56580 + 305 134047107 - SNSL254_pSN254_0075 - hypothetical protein 76 52.47 0 56577..57893 + 438 134047150 traB SNSL254_pSN254_0076 - type IV conjugative transfer system protein TraB 77 52.33 0 57890..58468 + 192 134047241 traV SNSL254_pSN254_0077 - type IV conjugative transfer system protein TraV 78 54.69 0 58481..58864 + 127 134047118 traA SNSL254_pSN254_0078 - type IV conjugative transfer system protein TraA 79 51.41 0 60806..61513 - 235 134047123 - SNSL254_pSN254_0081 - hypothetical protein 80 51.85 0 61662..67148 - 1828 134047225 - SNSL254_pSN254_0082 - hypothetical protein 81 51.25 0 67753..68193 + 146 134047260 sugE1 SNSL254_pSN254_0085 - quaternary ammonium compound-resistance protein SugE1 82 52.25 0 68190..68723 - 177 134047101 blc1 SNSL254_pSN254_0084 - outer membrane lipoprotein Blc 83 53.25 0 68817..70046 - 409 134047199 ampC SNSL254_pSN254_0086 - beta-lactamase 84 33.97 -2 70781..72043 + 420 134047113 insC3 SNSL254_pSN254_0088 - transposase InsC3 for insertion sequence ISEc9 85 53.25 0 72283..73512 + 409 134047254 ampC SNSL254_pSN254_0089 - beta-lactamase 86 52.25 0 73606..74139 + 177 134047098 blc2 SNSL254_pSN254_0091 - outer membrane lipoprotein Blc 87 51.25 0 74136..74576 - 146 134047220 sugE2 SNSL254_pSN254_0090 - quaternary ammonium compound-resistance protein SugE2 88 51.85 0 75181..80667 + 1828 134047272 - SNSL254_pSN254_0093 - hypothetical protein 89 51.41 0 80816..81523 + 235 134047146 - SNSL254_pSN254_0094 - hypothetical protein 90 52.29 0 81520..83967 + 815 134047203 traC SNSL254_pSN254_0095 - type IV conjugative transfer system protein TraC 91 53.14 0 83982..84299 + 105 134047176 - SNSL254_pSN254_0096 - hypothetical protein 92 51.22 0 84296..84826 + 176 134047165 - SNSL254_pSN254_0097 - type IV conjugative transfer system signal peptidase 93 52.76 0 84789..86054 + 421 134047266 traW SNSL254_pSN254_0098 - type IV conjugative transfer system protein TraW 94 50.89 0 86051..86722 + 223 134047159 - SNSL254_pSN254_0099 - cyclic diguanylate phosphodiesterase domain-containing protein 95 49.80 0 86719..87726 + 335 134047249 traU SNSL254_pSN254_0100 - type IV conjugative transfer system protein TraU 96 48.10 0 87842..90637 + 931 134047133 traN SNSL254_pSN254_0101 - conjugal transfer mating pair stabilization protein TraN 97 51.57 0 90676..91536 - 286 134047164 - SNSL254_pSN254_0102 - putative lipoprotein 98 53.74 0 91659..92300 - 213 134047093 - SNSL254_pSN254_0103 - hypothetical protein 99 47.04 -1 92595..92915 + 106 134047273 - SNSL254_pSN254_0104 - hypothetical protein 100 48.92 0 93219..93404 + 61 134047084 - SNSL254_pSN254_0105 - hypothetical protein 52.95 MEAN 5.39 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0