IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 32.75	0	517..1878	+	453	21281730	dnaA	MW0001	-	chromosomal replication initiation protein
2	 32.72	0	2156..3289	+	377	21281731	dnaN	MW0002	-	DNA polymerase III subunit beta
3	 35.37	0	3670..3915	+	81	21281732	-	MW0003	-	hypothetical protein
4	 33.78	0	3912..5024	+	370	21281733	recF	MW0004	-	recombination protein F
5	 36.95	+1	5034..6968	+	644	21281734	gyrB	MW0005	-	DNA gyrase subunit B
6	 36.90	+1	7005..9668	+	887	21281735	gyrA	MW0006	-	DNA gyrase subunit A
7	 37.02	+1	9755..10567	-	270	21281736	-	MW0007	-	hypothetical protein
8	 36.77	+1	10893..12407	+	504	21281737	hutH	MW0008	-	histidine ammonia-lyase
9	 34.50	0	12786..14072	+	428	21281738	serS	MW0009	-	seryl-tRNA synthetase
10	 37.36	+1	14724..15419	+	231	21281739	-	MW0010	-	hypothetical protein
11	 34.55	0	15416..15745	+	109	21281740	-	MW0011	-	hypothetical protein
12	 35.81	0	16108..17076	+	322	21281741	-	MW0012	-	hypothetical protein
13	 32.79	0	17384..18307	+	307	21281742	-	MW0013	-	hypothetical protein
14	 35.52	0	18322..20289	+	655	21281743	-	MW0014	-	hypothetical protein
15	 31.77	0	20286..20732	+	148	21281744	rplI	MW0015	-	50S ribosomal protein L9
16	 38.33	+1	20764..22164	+	466	21281745	dnaC	MW0016	-	replicative DNA helicase
17	 36.45	+1	22443..23726	+	427	21281746	purA	MW0017	-	adenylosuccinate synthetase
18	 36.47	+1	24930..25631	+	233	21281747	vicR	MW0018	-	response regulator
19	 34.81	0	25644..27470	+	608	21281748	vicK	MW0019	-	two-component sensor histidine kinase
20	 35.13	0	27463..28797	+	444	21281749	-	MW0020	-	hypothetical protein
21	 32.19	0	28798..29586	+	262	21281750	-	MW0021	-	hypothetical protein
22	 35.96	0	29975..30775	+	266	21281751	-	MW0022	-	hypothetical protein
23	 38.42	+1	31003..33321	+	772	21281752	-	MW0023	-	hypothetical protein
24	 39.17	+1	33689..34168	+	159	21281753	orfX	MW0024	-	hypothetical protein
25	 28.48	-1	34490..35746	+	418	21281754	-	MW0025	-	hypothetical protein
26	 24.58	-2	36161..36400	+	79	21281755	-	MW0026	-	hypothetical protein
27	 34.22	0	36432..37106	-	224	21281756	-	MW0027	-	transposase for IS-like element
28	 29.17	-1	37364..37531	+	55	21281757	-	MW0028	-	HMG-CoA synthase
29	 33.47	0	38288..39031	+	247	21281758	-	MW0029	-	hypothetical protein
30	 29.14	-1	39128..39556	+	142	21281759	-	MW0030	-	hypothetical protein
31	 30.59	0	39602..41608	-	668	21281760	mecA	MW0031	-	penicillin binding protein 2 prime
32	 29.28	-1	41708..42694	+	328	21281761	-	MW0032	-	truncated methicillin resistance protein MecR1
33	 36.36	+1	42597..42926	+	109	21281762	hsdR	MW0033	-	hypothetical protein
34	 28.28	-1	42917..44440	-	507	21281763	-	MW0034	-	hypothetical protein
35	 37.08	+1	44576..45082	-	168	21281764	-	MW0035	-	hypothetical protein
36	 32.05	0	45097..45408	-	103	21281765	-	MW0036	-	hypothetical protein
37	 36.47	+1	45495..45845	-	116	21281766	-	MW0037	-	hypothetical protein
38	 34.75	0	46367..47995	-	542	21281767	ccrB	MW0038	-	cassette chromosome recombinase B
39	 34.67	0	48017..49366	-	449	21281768	ccrA	MW0039	-	cassette chromosome recombinase A
40	 34.51	0	49600..51387	-	595	21281769	-	MW0040	-	hypothetical protein
41	 33.68	0	51387..51677	-	96	21281770	-	MW0041	-	hypothetical protein
42	 24.86	-2	51816..52865	+	349	21281771	-	MW0042	-	hypothetical protein
43	 28.50	-1	53483..54973	+	496	21281772	-	MW0043	-	hypothetical protein
44	 33.97	0	55346..55660	-	104	21281773	-	MW0044	-	hypothetical protein
45	 33.73	0	55597..56601	-	334	21281774	-	MW0045	-	hypothetical protein
46	 25.54	-2	56854..57225	+	123	21281775	-	MW0046	-	hypothetical protein
47	 30.11	0	57354..57974	+	206	21281776	-	MW0047	-	hypothetical protein
48	 27.68	-1	58513..59769	+	418	21281777	-	MW0048	-	hypothetical protein
49	 29.52	0	60241..60870	-	209	21281778	-	MW0049	-	putative transposase
50	 35.14	0	61038..61148	-	36	21281779	-	MW0050	-	putative transposase
51	 26.03	-2	61524..62249	+	241	21281780	-	MW0051	-	enterotoxin H
52	 23.81	-2	62816..63004	+	62	21281781	-	MW0052	-	hypothetical protein
53	 28.06	-1	63145..63618	+	157	21281782	-	MW0053	-	hypothetical protein
54	 31.48	0	64169..64924	-	251	21281783	-	MW0054	-	hypothetical protein
55	 31.03	0	64924..65184	-	86	21281784	-	MW0055	-	hypothetical protein
56	 31.84	0	65321..66388	+	355	21281785	-	MW0056	-	hypothetical protein
57	 33.56	0	66419..67753	+	444	21281786	-	MW0057	-	hypothetical protein
58	 32.58	0	67772..68965	+	397	21281787	-	MW0058	-	hypothetical protein
59	 38.91	+1	69632..70618	-	328	21281788	-	MW0059	-	hypothetical protein
60	 26.47	-1	70927..71130	+	67	21281789	-	MW0060	-	hypothetical protein
61	 31.65	0	71179..71475	+	98	21281790	-	MW0061	-	hypothetical protein
62	 29.07	-1	71547..72767	-	406	21281791	-	MW0062	-	hypothetical protein
63	 31.16	0	72760..73311	-	183	21281792	-	MW0063	-	hypothetical protein
64	 27.64	-1	73424..74284	+	286	21281793	-	MW0064	-	hypothetical protein
65	 26.22	-1	74639..75172	-	177	21281794	-	MW0065	-	hypothetical protein
66	 26.26	-1	75272..76006	+	244	21281795	-	MW0066	-	hypothetical protein
67	 30.07	0	76431..77042	+	203	21281796	-	MW0067	-	hypothetical protein
68	 31.30	0	77309..80461	+	1050	21281797	-	MW0068	-	hypothetical protein
69	 32.09	0	80518..81000	+	160	21281798	-	MW0069	-	hypothetical protein
70	 33.23	0	81205..82191	+	328	21281799	plc	MW0070	-	1-phosphatidylinositol phosphodiesterase precurosr
71	 29.57	0	82412..83182	+	256	21281800	-	MW0071	-	hypothetical protein
72	 28.02	-1	83234..84004	+	256	21281801	-	MW0072	-	hypothetical protein
73	 27.56	-1	84355..85047	+	230	21281802	-	MW0073	-	hypothetical protein
74	 33.77	0	85050..86426	+	458	21281803	-	MW0074	-	hypothetical protein
75	 27.58	-1	86423..86752	+	109	21281804	-	MW0075	-	hypothetical protein
76	 29.37	-1	86816..87067	+	83	21281805	-	MW0076	-	hypothetical protein
77	 33.65	0	87319..89556	+	745	21281806	-	MW0077	-	hypothetical protein
78	 36.90	+1	89707..90885	+	392	21281807	-	MW0078	-	hypothetical protein
79	 37.08	+1	90887..92275	+	462	21281808	-	MW0079	-	hypothetical protein
80	 35.79	0	92762..94429	-	555	21281809	-	MW0080	-	hypothetical protein
81	 35.75	0	94747..96522	-	591	21281810	-	MW0081	-	hypothetical protein
82	 29.75	0	96873..97346	+	157	21281811	-	MW0082	-	hypothetical protein
83	 34.59	0	97608..99200	+	530	21281812	lctP	MW0083	-	hypothetical protein
84	 38.07	+1	99529..101007	-	492	21281813	spa	MW0084	-	immunoglobulin G binding protein A precursor
85	 27.49	-1	101428..102180	-	250	21281814	sarH1	MW0085	-	hypothetical protein
86	 37.47	+1	102549..103466	-	305	21281815	sirC	MW0086	-	lipoprotein
87	 38.45	+1	103544..104539	-	331	21281816	sirB	MW0087	-	lipoprotein
88	 32.23	0	104555..105547	-	330	21281817	sirA	MW0088	-	lipoprotein
89	 36.80	+1	105778..106758	+	326	21281818	-	MW0089	-	hypothetical protein
90	 37.39	+1	106755..107765	+	336	21281819	-	MW0090	-	hypothetical protein
91	 35.56	0	107786..109540	+	584	21281820	-	MW0091	-	hypothetical protein
92	 39.14	+1	109533..110789	+	418	21281821	-	MW0092	-	hypothetical protein
93	 36.67	+1	110779..112515	+	578	21281822	-	MW0093	-	hypothetical protein
94	 36.03	0	112496..114274	+	592	21281823	-	MW0094	-	hypothetical protein
95	 40.13	+2	114246..115025	+	259	21281824	-	MW0095	-	hypothetical protein
96	 36.41	+1	115025..116227	+	400	21281825	-	MW0096	-	hypothetical protein
97	 37.25	+1	116231..116995	+	254	21281826	-	MW0097	-	hypothetical protein
98	 29.41	-1	117191..117598	+	135	21281827	-	MW0098	-	hypothetical protein
99	 31.42	0	117648..118274	+	208	21281828	-	MW0099	-	hypothetical protein
100	 40.93	+2	118486..119262	+	258	21281829	butA	MW0100	-	acetoin reductase
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.