IslandPath Analysis: Bacillus cereus E33L



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.50   STD DEV: 3.43
Bacillus cereus E33L, complete genome - 1..5300915
5134 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 35.35	0	408..1748	+	446	52145208	dnaA	BCZK0001	-	chromosomal replication initiation protein
2	 32.89	0	1927..3066	+	379	52145207	dnaN	BCZK0002	-	DNA polymerase III subunit beta
3	 33.78	0	3182..3406	+	74	52145205	-	BCZK0003	-	hypothetical protein
4	 34.31	0	3419..4546	+	375	52145206	recF	BCZK0004	-	recombination protein F
5	 37.23	0	4585..6507	+	640	52145204	gyrB	BCZK0005	-	DNA gyrase subunit B
6	 37.26	0	6596..9067	+	823	52145203	gyrA	BCZK0006	-	DNA gyrase subunit A
7	 33.83	0	14355..15356	-	333	52145202	-	BCZK0008	-	hypothetical protein
8	 38.66	0	15472..16935	+	487	52145201	guaB	BCZK0009	-	inositol-5-monophosphate dehydrogenase
9	 35.63	0	17049..18356	+	435	52145200	dacA	BCZK0010	-	serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine carboxypeptidase)
10	 43.47	+2	18518..19405	+	295	52145199	pdx1	BCZK0011	-	pyridoxine biosynthesis protein
11	 40.27	+1	19424..20014	+	196	52145198	guaA	BCZK0012	-	glutamine amidotransferase subunit PdxT
12	 37.96	0	20342..21616	+	424	52145196	serS	BCZK0013	-	seryl-tRNA synthetase
13	 34.60	0	21874..22425	+	183	52145197	-	BCZK0014	-	group-specific protein
14	 35.87	0	22461..23129	-	222	52145195	dck	BCZK0015	-	deoxynucleoside kinase
15	 34.43	0	23132..23767	-	211	52145194	dgk	BCZK0016	-	deoxyguanosine kinase
16	 30.74	-1	23893..24432	-	179	52145191	pncA	BCZK0017	-	nicotinamidase (pyrazinamidase)
17	 37.72	0	24540..25040	+	166	52145192	-	BCZK0018	-	cytidine/deoxycytidylate deaminase family protein
18	 39.08	+1	25517..27205	+	562	52145193	dnaX	BCZK0019	-	DNA polymerase III subunits gamma and tau
19	 36.97	0	27228..27557	+	109	52145189	-	BCZK0020	-	hypothetical protein
20	 39.70	+1	27572..28168	+	198	52145190	recR	BCZK0021	-	recombination protein RecR
21	 33.78	0	28183..28404	+	73	52145186	-	BCZK0022	-	hypothetical protein
22	 32.22	0	28620..28889	+	89	52145187	bofA	BCZK0023	-	sigma-K factor processing regulatory protein
23	 34.95	0	34561..35982	+	473	52145188	cad	BCZK0025	-	lysine decarboxylase
24	 36.68	0	35984..36610	+	208	52145185	tdk	BCZK0026	-	thymidylate kinase
25	 36.99	0	36646..37629	+	327	52145184	holB	BCZK0027	-	DNA polymerase III subunit delta'
26	 36.20	0	37626..38462	+	278	52145183	-	BCZK0028	-	signal peptidase-like protein
27	 33.06	0	38462..38827	+	121	52145182	-	BCZK0029	-	DNA replication intiation control protein YabA
28	 33.87	0	38948..39688	+	246	52145181	-	BCZK0030	-	methyltransferase
29	 34.02	0	39675..39965	+	96	52145180	uvrC	BCZK0031	-	GIY-YIG nuclease superfamily protein
30	 34.82	0	39934..40809	+	291	52145177	-	BCZK0032	-	uroporphyrin-III C-methyltransferase
31	 33.68	0	40830..41114	-	94	52145178	-	BCZK0033	-	transition state transcriptional regulatory protein
32	 36.01	0	41605..43587	+	660	52145179	metG	BCZK0034	-	methionyl-tRNA synthetase
33	 37.37	0	43753..44520	+	255	52145176	tatD	BCZK0035	-	TatD related DNase
34	 37.99	0	44734..45291	+	185	52145174	rnmV	BCZK0036	-	ribonuclease M5
35	 36.29	0	45288..46166	+	292	52145175	ksgA	BCZK0037	-	dimethyladenosine transferase
36	 37.27	0	46277..47140	+	287	52145173	-	BCZK0038	-	sporulation-specific protease
37	 36.40	0	47379..47639	+	86	52145172	veg	BCZK0039	-	veg protein
38	 38.23	0	48098..48976	+	292	52145171	ispE	BCZK0040	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
39	 37.10	0	49031..49879	+	282	52145170	purR	BCZK0041	-	purine operon repressor
40	 34.93	0	50002..50376	+	124	52145167	purR	BCZK0042	-	pur operon repressor
41	 40.82	+1	50529..50822	+	97	161763537	spoVG	BCZK0043	-	regulatory protein SpoVG
42	 38.19	0	51145..52524	+	459	52145169	gcaD	BCZK0044	-	UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase)
43	 36.90	0	52543..53496	+	317	52145166	prs	BCZK0045	-	ribose-phosphate pyrophosphokinase
44	 34.58	0	53569..54129	+	186	52145164	spoVC	BCZK0046	-	peptidyl-tRNA hydrolase
45	 32.89	0	54200..54424	+	74	52145165	-	BCZK0047	-	hypothetical protein
46	 35.85	0	54530..58060	+	1176	52145163	mfd	BCZK0048	-	transcription-repair coupling factor
47	 36.69	0	58197..58733	+	178	52145162	spoVT	BCZK0049	-	stage V sporulation protein T
48	 34.83	0	58964..60565	+	533	52145161	-	BCZK0050	-	integral membrane protein; stage V sporulation protein B
49	 37.51	0	60578..62038	+	486	52145160	mazG	BCZK0051	-	fused tetrapyrrole methylase domain/nucleotide pyrophosphohydrolase domain-containing protein
50	 33.33	0	62053..62328	+	91	52145158	hslR	BCZK0052	-	heat shock protein 15
51	 33.33	0	62369..62695	+	108	52145159	-	BCZK0053	-	hypothetical protein
52	 32.42	0	62692..63345	+	217	52145154	-	BCZK0054	-	hypothetical protein
53	 33.33	0	63342..63701	+	119	52145155	divIC	BCZK0055	-	cell division protein DIVIC
54	 43.06	+2	63789..64271	+	160	52145156	-	BCZK0056	-	hypothetical protein
55	 36.53	0	64943..67321	+	792	52145157	spoIIE	BCZK0057	-	serine/threonine specific protein phosphatase; stage II sporulation protein E
56	 36.34	0	67555..68985	+	476	52145153	mesJ	BCZK0058	-	cell cycle protein
57	 34.25	0	68982..69524	+	180	52145152	hprT	BCZK0059	-	hypoxanthine-guanine phosphoribosyltransferase
58	 40.12	+1	69610..71511	+	633	52145151	ftsH	BCZK0060	-	cell division protein
59	 37.64	0	71736..72524	+	262	52145149	-	BCZK0061	-	pantothenate kinase
60	 39.84	+1	72531..73406	+	291	52145150	hslO	BCZK0062	-	Hsp33-like chaperonin
61	 39.83	+1	73511..74434	+	307	52145148	cysK	BCZK0063	-	cysteine synthase (cysteine synthase A) (O-acetylserine sulfhydrylase)
62	 38.27	0	74655..76052	+	465	52145147	pabB	BCZK0064	-	para-aminobenzoate synthase component I
63	 39.29	+1	76058..76645	+	195	52145145	pabA	BCZK0065	-	para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
64	 34.82	0	76639..77511	+	290	52145146	pabC	BCZK0066	-	4-amino-4-deoxychorismate lyase
65	 38.91	0	77504..78346	+	280	52145143	sul	BCZK0067	-	dihydropteroate synthase (DHPS) (dihydropteroate pyrophosphorylase)
66	 36.09	0	78347..78709	+	120	52145144	folB	BCZK0068	-	dihydroneopterin aldolase
67	 34.30	0	78706..79221	+	171	52145142	folK	BCZK0069	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
68	 39.22	+1	79173..79376	+	67	52145140	-	BCZK0070	-	transcriptional regulator
69	 39.44	+1	79400..80398	+	332	52145141	-	BCZK0071	-	NifR3 family TIM-barrel protein
70	 36.80	0	80558..82057	+	499	52145139	lysS	BCZK0072	-	lysyl-tRNA synthetase
71	 33.12	0	87420..87881	+	153	52145137	ctsR	BCZK0074	-	transcriptional regulator
72	 35.15	0	88041..88589	+	182	52145138	-	BCZK0075	-	nucleotide excision repair protein
73	 34.65	0	88594..89658	+	354	52145136	karG	BCZK0076	-	ATP:guanido phosphotransferase
74	 38.59	0	89681..92116	+	811	52145135	clpC	BCZK0077	-	negative regulator of genetic competence clpC/mecB (ATP-dependent Clp protease)
75	 39.51	+1	92213..93589	+	458	52145134	radA	BCZK0078	-	DNA repair protein RadA
76	 37.52	0	93593..94666	+	357	52145132	-	BCZK0079	-	DNA integrity scanning protein DisA
77	 35.05	0	94828..95937	+	369	52145133	-	BCZK0080	-	hypothetical protein
78	 39.06	+1	95954..96634	+	226	52145131	ispD	BCZK0081	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
79	 38.16	0	96749..97225	+	158	52145129	ispF	BCZK0082	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
80	 37.04	0	97315..98772	+	485	52145130	gltX	BCZK0083	-	glutamyl-tRNA synthetase
81	 37.69	0	99205..99870	+	221	52145128	cysE	BCZK0084	-	serine O-acetyltransferase
82	 36.77	0	99851..101248	+	465	52145127	cysS	BCZK0085	-	cysteinyl-tRNA synthetase
83	 38.24	0	101251..101658	+	135	52145125	-	BCZK0086	-	hypothetical protein
84	 37.50	0	101655..102398	+	247	52145126	-	BCZK0087	-	TrmH family tRNA methyltransferase
85	 37.82	0	102402..102914	+	170	52145124	-	BCZK0088	-	hypothetical protein
86	 35.92	0	102982..103638	+	218	52145123	spo0H	BCZK0089	-	RNA polymerase factor sigma-70
87	 37.78	0	103949..104128	+	59	52145297	secE	BCZK0089.1	-	preprotein translocase subunit SecE
88	 37.45	0	104260..104793	+	177	52145121	nusG	BCZK0090	-	transcription antitermination protein NusG
89	 42.96	+2	104961..105386	+	141	161763538	rplK	BCZK0091	-	50S ribosomal protein L11
90	 40.84	+1	105564..106256	+	230	52145120	rplA	BCZK0092	-	50S ribosomal protein L1
91	 40.92	+1	106489..106989	+	166	52145118	rplJ	BCZK0093	-	50S ribosomal protein L10
92	 39.17	+1	107057..107416	+	119	52145119	rplL	BCZK0094	-	50S ribosomal protein L7/L12
93	 39.00	+1	107493..108092	+	199	52145117	-	BCZK0095	-	methyltransferase
94	 41.79	+1	108386..111919	+	1177	52145116	rpoB	BCZK0096	-	DNA-directed RNA polymerase subunit beta
95	 40.39	+1	111957..115568	+	1203	52145115	rpoC	BCZK0097	-	DNA-directed RNA polymerase subunit beta'
96	 36.88	0	115649..115930	+	93	52145114	-	BCZK0098	-	hypothetical protein
97	 40.43	+1	116045..116467	+	140	52145112	rpsL	BCZK0099	-	30S ribosomal protein S12
98	 42.25	+1	116497..116967	+	156	52145113	rpsG	BCZK0100	-	30S ribosomal protein S7
99	 42.52	+2	117175..119253	+	692	52145111	fusA	BCZK0101	-	elongation factor G
100	 43.94	+2	119371..120558	+	395	52145110	tuf	BCZK0102	-	elongation factor Tu
35.50	MEAN

3.43	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.