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Synechococcus sp. CC9311, complete genome - 1..2606748 2892 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 56.74 0 174..1331 + 385 113953564 dnaN sync_0001 - DNA polymerase III subunit beta 2 58.05 0 1348..2148 + 266 113953136 - sync_0002 - hypothetical protein 3 57.80 0 2185..4518 + 777 113955261 purL sync_0003 - phosphoribosylformylglycinamidine synthase II 4 54.71 0 4518..6023 + 501 113954725 purF sync_0004 - amidophosphoribosyltransferase 5 55.62 0 6024..8486 - 820 113953878 gyrA-1 sync_0005 - DNA gyrase subunit A 6 53.33 0 8556..9455 - 299 113953244 - sync_0006 - TPR repeat-containing protein 7 56.62 0 9455..10429 - 324 113952821 - sync_0007 - iron-sulfur cluster binding protein, putative 8 53.24 0 10474..11136 + 220 113953255 - sync_0008 - hypothetical protein 9 51.47 0 11192..11941 + 249 113954152 - sync_0009 - hypothetical protein 10 53.71 0 11963..12595 + 210 113954607 nusB sync_0010 - transcription antitermination protein NusB 11 56.64 0 12600..14255 + 551 113955324 ftsY sync_0011 - signal recognition particle-docking protein FtsY 12 56.67 0 14323..15732 + 469 113953373 - sync_0012 - SpoIIE domain-containing protein 13 55.60 0 15764..17182 + 472 113954024 argH sync_0013 - argininosuccinate lyase 14 62.82 +1 17309..17854 + 181 113955034 - sync_0014 - RNA recognition motif-containing protein 15 57.51 0 17873..18877 - 334 113955552 - sync_0015 - tRNA-dihydrouridine synthase A 16 54.58 0 18944..19456 + 170 113954714 msrB-1 sync_0016 - methionine-R-sulfoxide reductase 17 59.13 +1 19383..20696 + 437 113953859 - sync_0017 - hypothetical protein 18 46.97 0 20744..24079 - 1111 113955252 - sync_0018 - hypothetical protein 19 52.30 0 24218..25498 - 426 113955237 pilC sync_0019 - type IV pilus assembly protein PilC 20 54.65 0 25515..26579 - 354 113954482 pilT sync_0020 - twitching motility protein 21 51.60 0 26600..28471 - 623 113954125 pilB sync_0021 - type IV pilus assembly protein PilB 22 55.43 0 28371..29180 + 269 113952817 grpE-1 sync_0022 - co-chaperone GrpE 23 57.29 0 29298..30353 + 351 113955228 - sync_0023 - DnaJ protein 24 55.14 0 30357..30599 + 80 113954491 - sync_0024 - hypothetical protein 25 58.36 +1 30586..31500 + 304 113955161 - sync_0025 - ribosome-associated GTPase YjeQ 26 57.02 0 31475..31816 - 113 113952731 - sync_0026 - hypothetical protein 27 58.15 +1 31841..32779 - 312 113955022 murB sync_0027 - UDP-N-acetylenolpyruvoylglucosamine reductase 28 55.99 0 32755..34206 - 483 113954195 murC sync_0028 - UDP-N-acetylmuramate--alanine ligase 29 53.61 0 34373..35398 + 341 113953745 gap-1 sync_0029 - glyceraldehyde-3-phosphate dehydrogenase, type I 30 60.86 +1 35461..36441 - 326 113952878 thiL sync_0030 - thiamine-monophosphate kinase 31 56.15 0 36449..37522 - 357 113954808 - sync_0031 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 32 52.84 0 37588..38151 + 187 113955533 efp sync_0032 - elongation factor P 33 57.71 0 38154..38633 + 159 113953615 accB sync_0033 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 34 58.70 +1 38620..39648 - 342 113952791 pdxA sync_0034 - 4-hydroxythreonine-4-phosphate dehydrogenase 35 58.82 +1 39804..40733 - 309 113953487 wcaG-1 sync_0035 - NAD dependent epimerase/dehydratase 36 63.02 +1 40806..40997 + 63 113954479 - sync_0036 - Squash family serine protease inhibitor 37 54.86 0 40998..41429 - 143 113955234 mcrA sync_0037 - HNH endonuclease:HNH nuclease 38 57.79 0 41838..43223 + 461 113952800 - sync_0038 - helicase 39 51.74 0 43576..44091 - 171 113953453 - sync_0039 - penicillin amidase 40 58.33 +1 44072..44587 - 171 113954460 - sync_0040 - hypothetical protein 41 53.26 0 44672..44962 + 96 113955144 - sync_0041 - methyl-accepting chemotaxis protein 42 51.47 0 45001..45204 + 67 113953178 - sync_0042 - hypothetical protein 43 46.49 -1 45259..45486 + 75 113953848 - sync_0043 - hypothetical protein 44 55.93 0 45613..46767 - 384 113953744 - sync_0045 - soluble hydrogenase, tritium exchange subunit, putative 45 57.83 0 46810..47997 + 395 113952935 cbiD sync_0046 - cobalt-precorrin-6A synthase 46 52.05 0 48046..49632 + 528 113954939 guaA sync_0047 - bifunctional GMP synthase/glutamine amidotransferase protein 47 54.07 0 50173..50553 + 126 113954102 - sync_0048 - hypothetical protein 48 55.25 0 51902..52549 + 215 113953079 - sync_0049 - hypothetical protein 49 56.14 0 52504..52959 + 151 113955380 - sync_0050 - hypothetical protein 50 57.59 0 52965..54770 + 601 113954455 - sync_0051 - putative penicillin-binding protein 51 60.38 +1 54772..55917 - 381 113953518 - sync_0052 - glycosyl transferase, group 1 family protein 52 55.97 0 55931..57127 - 398 113953180 sqdB sync_0053 - sulfolipid biosynthesis protein SqdB 53 59.52 +1 57186..57353 - 55 113953979 - sync_0054 - high light inducible protein 54 59.66 +1 57488..58357 - 289 113954659 thiG sync_0055 - thiazole synthase 55 53.82 0 58299..58913 + 204 113955196 - sync_0056 - hypothetical protein 56 52.78 0 58881..59456 - 191 113953011 - sync_0057 - putative photosystem I assembly related protein Ycf37 57 54.60 0 59493..59840 - 115 113955438 rplT sync_0058 - 50S ribosomal protein L20 58 55.56 0 59911..60108 - 65 113954838 rpmI sync_0059 - 50S ribosomal protein L35 59 59.91 +1 60053..61798 + 581 113953827 - sync_0060 - SpoIID/LytB domain-containing protein 60 57.91 0 61805..63208 + 467 113954332 - sync_0061 - glycosyl transferase, group 2 family protein 61 60.04 +1 63229..65160 - 643 113955220 dnaX sync_0062 - DNA polymerase III, subunits gamma and tau 62 57.33 0 65184..65879 - 231 113954428 - sync_0063 - hypothetical protein 63 56.93 0 65892..67247 - 451 113955227 clpX sync_0064 - ATP-dependent protease ATP-binding subunit 64 56.38 0 67336..68025 - 229 113953857 clpP-1 sync_0065 - ATP-dependent Clp protease, proteolytic subunit ClpP 65 57.63 0 68072..69421 - 449 113954868 tig sync_0066 - trigger factor 66 56.98 0 69595..70626 + 343 113955388 asd sync_0067 - aspartate-semialdehyde dehydrogenase 67 58.42 +1 70632..71540 + 302 113952943 dapA sync_0068 - dihydrodipicolinate synthase 68 56.87 0 71600..73630 + 676 113954463 - sync_0069 - metallo-beta-lactamase family protein 69 54.72 0 73616..74251 - 211 113953477 - sync_0070 - hypothetical protein 70 60.24 +1 74423..75418 - 331 113953772 - sync_0071 - MesJ-like protein 71 61.24 +1 75518..76291 + 257 113953983 - sync_0072 - hypothetical protein 72 58.22 +1 76413..76838 + 141 113955178 - sync_0073 - hypothetical protein 73 52.25 0 76950..78989 + 679 113952727 uvrB sync_0074 - excinuclease ABC subunit B 74 61.55 +1 78990..80807 - 605 113953978 - sync_0075 - aspartate kinase 75 45.58 -1 80858..81763 + 301 113954436 - sync_0076 - curli production assembly/transport component CsgG subfamily protein 76 58.82 +1 81808..82788 - 326 113953684 holA sync_0077 - DNA polymerase III subunit delta 77 63.83 +2 82922..83485 + 187 113952958 cobH sync_0078 - precorrin-8X methylmutase 78 61.40 +1 83470..86205 - 911 113955376 mutS sync_0079 - DNA mismatch repair protein 79 60.32 +1 86371..86559 + 62 113953382 psbZ sync_0080 - photosystem II reaction center protein Z 80 55.28 0 86622..87104 + 160 113954000 ribH sync_0081 - riboflavin synthase subunit beta 81 52.57 0 87347..87949 + 200 113954986 - sync_0083 - glyoxalase family protein family 82 60.31 +1 88284..88739 - 151 113952993 wecD sync_0084 - hypothetical protein 83 54.99 0 88881..90002 + 373 113954981 - sync_0085 - glycosyl transferase, group 1 family protein 84 55.66 0 90095..92947 + 950 113952715 secA sync_0086 - preprotein translocase subunit SecA 85 56.76 0 92957..93703 - 248 113954660 cysE sync_0087 - serine O-acetyltransferase 86 59.60 +1 93784..94773 - 329 113954360 - sync_0088 - transcriptional regulator, GntR family protein 87 59.82 +1 94883..95656 + 257 113952933 - sync_0089 - dienelactone hydrolase 88 54.77 0 95647..96285 - 212 113953559 infC sync_0090 - translation initiation factor IF-3 89 60.88 +1 96339..97271 - 310 113955372 miaA sync_0091 - tRNA delta(2)-isopentenylpyrophosphate transferase 90 52.34 0 97390..99357 + 655 113954544 gyrB sync_0092 - DNA gyrase subunit B 91 61.27 +1 99381..99695 + 104 113954021 - sync_0093 - hypothetical protein 92 56.45 0 99688..100098 + 136 113955029 - sync_0094 - protein CrcB homolog 1 93 55.81 0 100098..100493 + 131 113954786 crcB sync_0095 - crcB protein 94 54.37 0 100483..100962 - 159 113954274 - sync_0096 - glutathione peroxidase 95 57.66 0 101040..102494 + 484 113954143 mgtE sync_0097 - magnesium transporter 96 57.14 0 102547..103554 + 335 113954561 - sync_0098 - Type II alternative RNA polymerase sigma factor, sigma-70 family protein 97 50.17 0 103539..104435 - 298 113953151 - sync_0099 - hydrolase 98 52.04 0 104459..107713 - 1084 113954483 - sync_0100 - acriflavin resistance protein acrF 99 50.56 0 107718..108872 - 384 113954092 - sync_0101 - RND family efflux transporter MFP subunit 100 56.88 0 109043..110197 + 384 113954882 - sync_0102 - putative A/G-specific adenine glycosylase 52.51 MEAN 5.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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