version 1.0
Deinococcus geothermalis DSM 11300, complete genome - 1..2467205 2335 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 58.67 -2 222..1634 + 470 94984110 - Dgeo_0001 - chromosomal replication initiator protein DnaA 2 43.75 -2 1599..1838 - 79 94984111 - Dgeo_0002 - hypothetical protein 3 62.05 -1 2025..3107 + 360 94984112 - Dgeo_0003 - DNA polymerase III, beta subunit 4 64.38 0 3245..4513 + 422 94984113 - Dgeo_0004 - phosphopyruvate hydratase 5 62.87 -1 4600..6048 + 482 94984114 - Dgeo_0005 - pyruvate kinase 6 65.14 0 6295..7536 - 413 94984115 - Dgeo_0006 - tyrosyl-tRNA synthetase 7 69.40 0 7665..8285 + 206 94984116 - Dgeo_0007 - MOSC domain-containing protein 8 64.31 0 8301..8852 + 183 94984117 - Dgeo_0008 - hypothetical protein 9 69.17 0 8833..9510 + 225 94984118 - Dgeo_0009 - hypothetical protein 10 63.70 0 9612..11432 - 606 94984119 - Dgeo_0010 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 11 69.07 0 11803..13008 - 401 94984120 - Dgeo_0011 - methionine gamma-lyase 12 67.59 0 13036..13686 - 216 94984121 - Dgeo_0012 - hypothetical protein 13 61.75 -1 13862..14044 + 60 94984122 rpmF Dgeo_0013 - 50S ribosomal protein L32 14 72.14 +1 14304..15089 + 261 94984123 - Dgeo_0014 - response regulator receiver/SARP domain-containing protein 15 69.26 0 15138..15407 + 89 94984124 - Dgeo_0015 - hypothetical protein 16 65.95 0 15559..16119 + 186 94984125 - Dgeo_0016 - cytochrome c oxidase, subunit II 17 64.57 0 16130..17893 + 587 94984126 - Dgeo_0017 - cytochrome c oxidase, subunit I 18 69.78 0 17893..18309 + 138 94984127 - Dgeo_0018 - cytochrome c, class I 19 72.97 +1 18407..19438 + 343 94984128 - Dgeo_0019 - A/G-specific adenine glycosylase 20 66.19 0 19494..20324 + 276 94984129 - Dgeo_0020 - undecaprenyl diphosphate synthase 21 71.61 +1 20373..22334 + 653 94984130 - Dgeo_0021 - HRDC 22 66.67 0 22331..22666 - 111 94984131 - Dgeo_0022 - hypothetical protein 23 70.19 0 22666..23487 - 273 94984132 - Dgeo_0023 - ABC transporter related 24 71.08 +1 23480..24499 - 339 94984133 - Dgeo_0024 - transport system permease protein 25 65.98 0 24503..25372 - 289 94984134 - Dgeo_0025 - periplasmic binding protein 26 67.29 0 25679..26323 - 214 94984135 - Dgeo_0026 - phospholipid/glycerol acyltransferase 27 68.25 0 26392..26643 - 83 94984136 - Dgeo_0027 - hypothetical protein 28 67.51 0 27484..27840 - 118 94984137 - Dgeo_0029 - hypothetical protein 29 70.37 0 27906..28526 - 206 94984138 - Dgeo_0030 - hypothetical protein 30 69.77 0 28523..29392 - 289 94984139 - Dgeo_0031 - hypothetical protein 31 71.42 +1 29584..30993 + 469 94984140 - Dgeo_0032 - ribonuclease II 32 63.92 0 31038..31328 + 96 94984141 - Dgeo_0033 - hypothetical protein 33 66.28 0 31472..32503 + 343 94984142 - Dgeo_0034 - peptidyl-arginine deiminase 34 67.35 0 32488..33663 + 391 94984143 - Dgeo_0035 - hypothetical protein 35 64.86 0 33677..34561 + 294 94984144 - Dgeo_0036 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 36 69.91 0 34598..35398 - 266 94984145 - Dgeo_0037 - tRNA pseudouridine synthase A 37 68.88 0 35401..36393 + 330 94984146 - Dgeo_0038 - peptidase M23B 38 70.18 0 36398..36625 + 75 94984147 - Dgeo_0039 - hypothetical protein 39 69.34 0 36626..37411 - 261 94984148 - Dgeo_0040 - stationary-phase survival protein SurE 40 66.34 0 37477..38694 - 405 94984149 - Dgeo_0041 - alcohol dehydrogenase GroES-like protein 41 68.84 0 38691..39425 - 244 94984150 - Dgeo_0042 - cyclase/dehydrase 42 61.38 -1 39684..40118 + 144 94984151 - Dgeo_0043 - response regulator receiver protein 43 67.28 0 40286..40609 + 107 94984152 - Dgeo_0044 - multisubunit Na+/H+ antiporter MnhE subunit-like protein 44 61.66 -1 40596..41294 - 232 94984153 - Dgeo_0045 - hypothetical protein 45 67.34 0 41414..42151 + 245 94984154 - Dgeo_0046 - polysaccharide deacetylase 46 68.60 0 42215..42886 - 223 94984155 - Dgeo_0047 - hypothetical protein 47 68.65 0 43033..44091 + 352 94984156 - Dgeo_0048 - permease YjgP/YjgQ 48 68.66 0 44102..45205 + 367 94984157 - Dgeo_0049 - permease YjgP/YjgQ 49 68.36 0 45266..46681 + 471 94984158 - Dgeo_0050 - cyclopropane-fatty-acyl-phospholipid synthase 50 68.51 0 46701..48812 - 703 94984159 - Dgeo_0051 - phosphate acetyltransferase 51 69.44 0 48809..49996 - 395 94984160 - Dgeo_0052 - acetate kinase 52 69.78 0 50064..50513 - 149 94984161 - Dgeo_0053 - hypothetical protein 53 70.85 +1 50524..52458 - 644 94984162 - Dgeo_0054 - hypothetical protein 54 70.25 0 52487..54076 - 529 94984163 - Dgeo_0055 - hypothetical protein 55 66.81 0 54073..54783 - 236 94984164 - Dgeo_0056 - roadblock/LC7 domain-contain protein 56 66.92 0 54859..56049 + 396 94984165 - Dgeo_0057 - pyridoxal phosphate-dependent acyltransferase, putative 57 68.06 0 56125..56844 + 239 94984166 - Dgeo_0058 - ubiquinone/menaquinone biosynthesis methyltransferases 58 68.41 0 57092..58465 + 457 94984167 - Dgeo_0059 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 59 71.97 +1 58462..59178 + 238 94984168 - Dgeo_0060 - HAD family hydrolase 60 61.32 -1 59257..59499 + 80 94984169 - Dgeo_0061 - hypothetical protein 61 69.07 0 59640..60263 + 207 94984170 - Dgeo_0062 - phosphoglycerate mutase 62 67.58 0 60394..61812 - 472 94984171 - Dgeo_0063 - amidophosphoribosyltransferase 63 68.36 0 61809..64049 - 746 94984172 - Dgeo_0064 - phosphoribosylformylglycinamidine synthase II 64 66.67 0 64046..64714 - 222 94984173 - Dgeo_0065 - phosphoribosylformylglycinamidine synthase I 65 61.63 -1 64711..64968 - 85 94984174 - Dgeo_0066 - phosphoribosylformylglycinamidine synthetase PurS 66 64.05 0 65028..65753 - 241 94984175 - Dgeo_0067 - phosphoribosylaminoimidazole-succinocarboxamide synthase 67 72.07 +1 66048..66899 - 283 94984176 - Dgeo_0068 - HemK family modification methylase 68 71.24 +1 66937..67527 - 196 94984177 - Dgeo_0069 - single-stranded nucleic acid binding R3H 69 66.50 0 67615..68199 - 194 94984178 - Dgeo_0070 - peptidylprolyl isomerase 70 68.88 0 68257..69522 - 421 94984179 - Dgeo_0071 - peptidase M29, aminopeptidase II 71 69.05 0 69773..70234 - 153 94984180 - Dgeo_0072 - tRNA/rRNA methyltransferase (SpoU) 72 68.50 0 70231..70722 - 163 94984181 - Dgeo_0073 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 73 70.99 +1 70807..71430 - 207 94984182 - Dgeo_0074 - hypothetical protein 74 69.70 0 71427..72053 - 208 94984183 - Dgeo_0075 - NUDIX hydrolase 75 64.87 0 72291..72848 - 185 94984184 - Dgeo_0076 - DinB 76 69.86 0 72893..73894 - 333 94984185 - Dgeo_0077 - dihydrouridine synthase, DuS 77 69.03 0 74053..74559 + 168 94984186 - Dgeo_0078 - GCN5-related N-acetyltransferase 78 70.13 0 74592..75341 + 249 94984187 - Dgeo_0079 - acetylglutamate kinase 79 69.29 0 75346..75954 - 202 94984188 - Dgeo_0080 - ribosomal protein N-acetyltransferase, putative 80 72.13 +1 75968..77083 - 371 94984189 - Dgeo_0081 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 81 70.97 +1 77080..77613 - 177 94984190 - Dgeo_0082 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 82 71.11 +1 77636..78850 + 404 94984191 - Dgeo_0083 - FolC bifunctional protein 83 66.67 0 79358..79795 + 145 94984192 - Dgeo_0084 - hypothetical protein 84 65.96 0 80110..80535 - 141 94984193 - Dgeo_0085 - hypothetical protein 85 63.13 0 80725..81318 + 197 94984194 - Dgeo_0086 - hypothetical protein 86 67.26 0 81377..82045 + 222 94984195 - Dgeo_0087 - two component transcriptional regulator 87 67.78 0 82042..83121 + 359 94984196 - Dgeo_0088 - periplasmic sensor signal transduction histidine kinase 88 66.95 0 83147..85648 - 833 94984197 - Dgeo_0089 - ATPase, P type cation/copper-transporter 89 63.47 0 85816..86034 + 72 94984198 - Dgeo_0090 - heavy metal transport/detoxification protein 90 64.06 0 86034..86378 + 114 94984199 - Dgeo_0091 - hypothetical protein 91 69.27 0 86421..87728 - 435 94984200 - Dgeo_0092 - hypothetical protein 92 67.74 0 87831..88760 + 309 94984201 - Dgeo_0093 - porphobilinogen deaminase 93 69.36 0 88951..89916 + 321 94984202 - Dgeo_0094 - asparaginase/glutaminase 94 65.21 0 89945..90562 - 205 94984203 - Dgeo_0095 - DedA family protein 95 69.74 0 90628..91344 + 238 94984204 - Dgeo_0096 - HAD family hydrolase 96 65.17 0 91376..92311 - 311 94984205 - Dgeo_0097 - twin-arginine translocation pathway signal 97 67.55 0 92543..93220 - 225 94984206 - Dgeo_0098 - short-chain dehydrogenase/reductase SDR 98 71.44 +1 93423..94889 - 488 94984207 - Dgeo_0099 - UDP-N-acetylmuramyl-tripeptide synthetases 99 69.53 0 94990..95373 + 127 94984208 - Dgeo_0100 - ArsR family transcriptional regulator 100 61.86 -1 95398..96021 - 207 94984209 - Dgeo_0101 - deoxynucleoside kinase 66.82 MEAN 3.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.