version 1.0
Burkholderia vietnamiensis G4 chromosome 1, complete sequence - 1..3652814 3274 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 66.03 0 294..1871 + 525 134294129 dnaA Bcep1808_0001 - chromosomal replication initiation protein 2 64.32 0 2040..3146 + 368 134294130 - Bcep1808_0002 - DNA polymerase III subunit beta 3 62.26 0 3340..5814 + 824 134294131 gyrB Bcep1808_0003 - DNA gyrase subunit B 4 60.45 -1 6157..9279 - 1040 134294132 - Bcep1808_0004 - HsdR family type I site-specific deoxyribonuclease 5 52.43 -2 9276..10223 - 315 134294133 - Bcep1808_0005 - hypothetical protein 6 65.45 0 11102..12658 + 518 134294134 - Bcep1808_0007 - integrase catalytic subunit 7 62.27 0 12675..13424 + 249 134294135 - Bcep1808_0008 - IstB ATP binding domain-containing protein 8 60.62 -1 14191..15777 - 528 134294136 - Bcep1808_0009 - N-6 DNA methylase 9 60.93 0 16111..16389 - 92 134294137 - Bcep1808_0010 - hypothetical protein 10 62.65 0 16644..17414 + 256 134294138 - Bcep1808_0011 - hypothetical protein 11 57.70 -1 17414..18160 + 248 134294139 - Bcep1808_0012 - hypothetical protein 12 62.70 0 18956..20191 + 411 134294140 - Bcep1808_0015 - transposase IS116/IS110/IS902 family protein 13 62.95 0 20121..21305 - 394 134294141 - Bcep1808_0016 - transposase, mutator type 14 56.57 -1 21342..22658 - 438 134294142 - Bcep1808_0017 - transposase IS3/IS911 family protein 15 54.74 -2 23088..23414 - 108 134294143 - Bcep1808_0019 - hypothetical protein 16 68.75 0 24413..25468 - 351 134294144 - Bcep1808_0021 - integrase catalytic subunit 17 56.70 -1 26336..26626 - 96 134294145 - Bcep1808_0022 - hypothetical protein 18 66.29 0 32363..32896 - 177 134294146 - Bcep1808_0023 - cytochrome B561 19 71.63 0 32893..33981 - 362 134294147 - Bcep1808_0024 - catalase domain-containing protein 20 68.59 0 34138..34656 + 172 134294148 - Bcep1808_0025 - ECF subfamily RNA polymerase sigma-24 factor 21 67.72 0 34653..35414 + 253 134294149 - Bcep1808_0026 - putative transmembrane anti-sigma factor 22 59.19 -1 35911..37047 - 378 134294150 - Bcep1808_0027 - hypothetical protein 23 56.06 -1 37518..37715 - 65 134294151 - Bcep1808_0028 - hypothetical protein 24 67.82 0 38113..38982 - 289 134294152 - Bcep1808_0029 - RNA polymerase sigma factor SigJ 25 66.88 0 38982..39458 - 158 134294153 - Bcep1808_0030 - alkylhydroperoxidase 26 60.44 -1 39688..40008 + 106 134294154 - Bcep1808_0031 - hypothetical protein 27 69.43 0 40013..41242 + 409 134294155 - Bcep1808_0032 - hypothetical protein 28 69.03 0 41226..42239 + 337 134294156 - Bcep1808_0033 - hypothetical protein 29 73.27 +1 42471..42773 + 100 134294157 - Bcep1808_0034 - hypothetical protein 30 71.37 0 42830..43084 + 84 134294158 - Bcep1808_0035 - hypothetical protein 31 71.88 0 43273..43656 + 127 134294159 - Bcep1808_0036 - hypothetical protein 32 69.05 0 43912..46938 - 1008 134294160 - Bcep1808_0037 - type III restriction enzyme, res subunit 33 68.50 0 46938..48956 - 672 134294161 - Bcep1808_0038 - site-specific DNA-methyltransferase (adenine-specific) 34 66.05 0 49292..50422 - 376 134294162 - Bcep1808_0039 - outer membrane protein (porin)-like protein 35 68.58 0 50702..51379 - 225 134294163 - Bcep1808_0040 - two component transcriptional regulator 36 71.86 0 51394..52761 - 455 134294164 - Bcep1808_0041 - integral membrane sensor signal transduction histidine kinase 37 67.48 0 52842..53699 - 285 134294165 - Bcep1808_0042 - binding-protein-dependent transport systems inner membrane component 38 66.79 0 53745..54542 - 265 134294166 - Bcep1808_0043 - ABC transporter related 39 67.36 0 54667..55671 - 334 134294167 - Bcep1808_0044 - ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 40 68.97 0 55817..56599 - 260 134294168 - Bcep1808_0045 - flagellar biosynthetic protein FliR 41 68.50 0 56628..56900 - 90 134294169 fliQ Bcep1808_0046 - flagellar biosynthesis protein FliQ 42 65.62 0 56916..57677 - 253 134294170 fliP Bcep1808_0047 - flagellar biosynthesis protein FliP 43 77.18 +1 57714..58274 - 186 134294171 - Bcep1808_0048 - flagellar biosynthesis protein, FliO 44 69.80 0 58280..58789 - 169 134294172 - Bcep1808_0049 - flagellar motor switch protein FliN 45 63.66 0 58782..59780 - 332 134294173 fliM Bcep1808_0050 - flagellar motor switch protein FliM 46 68.16 0 59803..60339 - 178 134294174 fliL Bcep1808_0051 - flagellar basal body-associated protein FliL 47 68.60 0 60562..61284 - 240 134294175 - Bcep1808_0052 - LrgB family protein 48 73.79 +1 61298..61774 - 158 134294176 - Bcep1808_0053 - LrgA family protein 49 70.77 0 61913..62839 + 308 134294177 - Bcep1808_0054 - LysR family transcriptional regulator 50 67.82 0 62966..64528 - 520 134294178 - Bcep1808_0055 - EmrB/QacA family drug resistance transporter 51 69.68 0 64704..65201 - 165 134294179 - Bcep1808_0056 - MarR family transcriptional regulator 52 72.79 +1 65375..65668 + 97 134294180 - Bcep1808_0057 - hypothetical protein 53 73.11 +1 65956..67491 + 511 134294181 - Bcep1808_0058 - RND efflux system outer membrane lipoprotein 54 73.26 +1 67520..68308 - 262 134294182 - Bcep1808_0059 - hypothetical protein 55 69.63 0 68340..68846 - 168 134294183 - Bcep1808_0060 - general secretion pathway M protein 56 73.90 +1 68843..70210 - 455 134294184 - Bcep1808_0061 - general secretion pathway protein L 57 70.66 0 70235..71335 - 366 134294185 - Bcep1808_0062 - general secretion pathway protein K 58 72.34 +1 71338..72042 - 234 134294186 - Bcep1808_0063 - putative general secretion pathway protein J 59 69.90 0 72020..72421 - 133 134294187 - Bcep1808_0064 - general secretion pathway protein I 60 73.63 +1 72424..72954 - 176 134294188 - Bcep1808_0065 - general secretion pathway protein H 61 63.80 0 72997..73449 - 150 134294189 - Bcep1808_0066 - general secretion pathway protein G 62 72.02 +1 73623..74033 + 136 134294190 - Bcep1808_0067 - hypothetical protein 63 69.38 0 74064..75281 - 405 134294191 - Bcep1808_0068 - general secretion pathway protein F 64 69.93 0 75286..76785 - 499 134294192 - Bcep1808_0069 - general secretory pathway protein E 65 67.74 0 76782..79106 - 774 134294193 - Bcep1808_0070 - general secretion pathway protein D 66 68.75 0 79219..80274 - 351 134294194 - Bcep1808_0071 - integrase catalytic subunit 67 62.17 0 80547..81080 + 177 134294195 - Bcep1808_0072 - lytic transglycosylase, catalytic 68 66.06 0 81226..82536 + 436 134294196 - Bcep1808_0073 - cobalamin synthesis protein, P47K 69 60.93 0 82677..82955 - 92 134294197 - Bcep1808_0074 - histone family protein DNA-binding protein 70 71.97 +1 83345..85306 + 653 134294198 mnmC Bcep1808_0075 - 5-methylaminomethyl-2-thiouridine methyltransferase 71 58.41 -1 85590..85928 + 112 134294199 - Bcep1808_0076 - hypothetical protein 72 65.02 0 85979..87193 + 404 134294200 - Bcep1808_0077 - sodium/hydrogen exchanger 73 63.53 0 87208..88323 + 371 134294201 - Bcep1808_0078 - carboxylate-amine ligase 74 53.33 -2 88333..88647 + 104 134294202 - Bcep1808_0079 - hypothetical protein 75 68.70 0 88828..89466 + 212 134294203 - Bcep1808_0080 - MarR family transcriptional regulator 76 70.89 0 89495..90205 + 236 134294204 - Bcep1808_0081 - glutamine amidotransferase 77 70.98 0 90361..91473 + 370 134294205 - Bcep1808_0082 - NADH:flavin oxidoreductase/NADH oxidase 78 62.34 0 91657..92187 + 176 134294206 - Bcep1808_0083 - nuclear protein SET 79 69.90 0 92329..93813 - 494 134294207 - Bcep1808_0084 - integral membrane sensor signal transduction histidine kinase 80 66.38 0 93943..94635 - 230 134294208 - Bcep1808_0085 - two component transcriptional regulator 81 57.85 -1 94728..94988 + 86 134294209 - Bcep1808_0086 - hypothetical protein 82 65.05 0 95082..95390 - 102 134294210 phhB Bcep1808_0087 - pterin-4-alpha-carbinolamine dehydratase 83 67.89 0 95544..96527 - 327 134294211 phhA Bcep1808_0088 - phenylalanine 4-monooxygenase 84 66.05 0 96577..97062 + 161 134294212 - Bcep1808_0089 - AsnC family transcriptional regulator 85 67.23 0 97142..97675 - 177 134294213 - Bcep1808_0090 - adenylate cyclase 86 70.39 0 97762..98700 - 312 134294214 - Bcep1808_0091 - LysR family transcriptional regulator 87 69.16 0 98826..100511 + 561 134294215 - Bcep1808_0092 - glucose-methanol-choline oxidoreductase 88 65.51 0 100965..101744 + 259 134294216 - Bcep1808_0093 - ABC transporter related 89 67.59 0 101741..102496 + 251 134294217 - Bcep1808_0094 - ABC transporter related 90 64.58 0 102574..103773 + 399 134294218 - Bcep1808_0095 - branched chain amino acid ABC transporter periplasmic ligand-binding protein 91 64.44 0 103836..104777 + 313 134294219 - Bcep1808_0096 - inner-membrane translocator 92 67.79 0 104777..105751 + 324 134294220 - Bcep1808_0097 - inner-membrane translocator 93 65.80 0 106824..107981 + 385 134294221 - Bcep1808_0098 - extracellular ligand-binding receptor 94 66.04 0 108075..109199 + 374 134294222 - Bcep1808_0099 - inner-membrane translocator 95 67.39 0 109204..110988 + 594 134294223 - Bcep1808_0100 - ABC transporter related 96 65.34 0 110988..111743 + 251 134294224 - Bcep1808_0101 - ABC transporter related 97 63.77 0 112214..114184 + 656 134294225 - Bcep1808_0102 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 98 62.01 0 114181..114867 + 228 134294226 - Bcep1808_0103 - methyltransferase GidB 99 63.59 0 114918..115697 + 259 134294227 - Bcep1808_0104 - chromosome segregation ATPase 100 66.22 0 115729..116622 + 297 134294228 - Bcep1808_0105 - chromosome segregation DNA-binding protein 66.40 MEAN 5.53 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.