version 1.0
Ralstonia pickettii 12J chromosome 2, complete sequence - 1..1302238 1153 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 63.28 0 23..1618 - 531 187925959 - Rpic_3761 - peptide chain release factor 3 2 63.43 0 1899..2207 + 102 187925960 - Rpic_3762 - hypothetical protein 3 63.70 0 2330..2632 + 100 187925961 - Rpic_3763 - hypothetical protein 4 66.57 0 2647..3636 - 329 187925962 - Rpic_3764 - ribonuclease BN 5 68.63 +1 3721..4026 - 101 187925963 - Rpic_3765 - hypothetical protein 6 57.74 -2 4080..4247 - 55 187925964 - Rpic_3766 - protein of unknown function DUF1328 7 65.17 0 4367..5773 - 468 187925965 - Rpic_3767 - two component, sigma54 specific, transcriptional regulator, Fis family 8 65.48 0 6310..7407 + 365 187925966 - Rpic_3768 - sigma54 specific transcriptional regulator, Fis family 9 67.91 0 7630..7950 - 106 187925967 - Rpic_3769 - conserved hypothetical signal peptide protein 10 65.60 0 8263..9765 + 500 187925968 - Rpic_3770 - RNA polymerase, sigma 54 subunit, RpoN 11 69.99 +1 9819..10991 + 390 187925969 - Rpic_3771 - glycosyl transferase group 1 12 66.54 0 11010..11804 + 264 187925970 - Rpic_3772 - hypothetical protein 13 65.74 0 11811..12347 - 178 187925971 - Rpic_3773 - phosphoesterase PA-phosphatase related 14 69.65 +1 12325..13497 - 390 187925972 - Rpic_3774 - glycosyl transferase group 1 15 69.44 +1 13506..13937 - 143 187925973 - Rpic_3775 - hypothetical protein 16 68.26 +1 14139..15458 - 439 187925974 - Rpic_3776 - protein of unknown function UPF0118 17 67.00 0 15460..17844 - 794 187925975 - Rpic_3777 - PAS/PAC sensor hybrid histidine kinase 18 60.92 -1 17929..18711 - 260 187925976 - Rpic_3778 - hypothetical protein 19 69.31 +1 19004..20287 + 427 187925977 - Rpic_3779 - putative proline-rich protein 20 63.45 0 20561..21865 - 434 187925978 - Rpic_3780 - Xanthine/uracil/vitamin C permease 21 61.45 0 23271..24344 + 357 187925979 - Rpic_3781 - plasmid encoded RepA protein 22 57.35 -2 24421..24624 - 67 187925980 - Rpic_3782 - cold-shock DNA-binding domain protein 23 59.49 -1 25030..25698 + 222 187925981 - Rpic_3783 - Cobyrinic acid ac-diamide synthase 24 57.84 -2 25695..26702 + 335 187925982 - Rpic_3784 - parB-like partition protein 25 65.59 0 27001..27837 + 278 187925983 - Rpic_3785 - hypothetical protein 26 62.79 0 28088..29041 + 317 187925984 - Rpic_3786 - UTP-glucose-1-phosphate uridylyltransferase 27 63.18 0 29300..30646 + 448 187925985 - Rpic_3787 - General substrate transporter 28 68.40 +1 30651..32558 + 635 187925986 - Rpic_3788 - integral membrane sensor signal transduction histidine kinase 29 65.05 0 32555..33913 + 452 187925987 - Rpic_3789 - two component, sigma54 specific, transcriptional regulator, Fis family 30 69.41 +1 33910..34710 - 266 187925988 - Rpic_3790 - putative lipoprotein transmembrane 31 66.67 0 34823..35263 + 146 187925989 - Rpic_3791 - conserved hypothetical signal peptide protein 32 66.26 0 35376..38057 + 893 187925990 - Rpic_3792 - diguanylate cyclase with PAS/PAC sensor 33 63.22 0 38492..39652 + 386 187925991 - Rpic_3793 - Extracellular ligand-binding receptor 34 65.99 0 39749..40630 + 293 187925992 - Rpic_3794 - inner-membrane translocator 35 64.91 0 40644..41552 + 302 187925993 - Rpic_3795 - inner-membrane translocator 36 63.53 0 41560..42357 + 265 187925994 - Rpic_3796 - ABC transporter related 37 64.88 0 42354..43079 + 241 187925995 - Rpic_3797 - ABC transporter related 38 68.12 +1 43153..44049 - 298 187925996 - Rpic_3798 - transcriptional regulator, LysR family 39 68.37 +1 44225..45223 + 332 187925997 - Rpic_3799 - Alcohol dehydrogenase zinc-binding domain protein 40 65.41 0 45319..45636 + 105 187925998 - Rpic_3800 - YCII-related 41 66.88 0 45689..47083 + 464 187925999 - Rpic_3801 - Chloride channel core 42 63.71 0 47353..49581 + 742 187926000 - Rpic_3802 - TonB-dependent siderophore receptor 43 64.34 0 49630..50316 + 228 187926001 - Rpic_3803 - 2OG-Fe(II) oxygenase 44 66.67 0 50377..50523 - 48 187926002 - Rpic_3804 - hypothetical protein 45 67.77 0 50648..53176 - 842 187926003 - Rpic_3805 - Pyruvate, water dikinase 46 65.24 0 53176..53805 - 209 187926004 - Rpic_3806 - transcriptional regulator, TetR family 47 65.41 0 53925..54878 + 317 187926005 - Rpic_3807 - proline iminopeptidase 48 65.02 0 54933..57359 + 808 187926006 - Rpic_3808 - multi-sensor hybrid histidine kinase 49 62.59 0 57801..58388 + 195 187926007 - Rpic_3809 - Fimbrial protein 50 62.23 0 58473..59216 + 247 187926008 - Rpic_3810 - Pili assembly chaperone, N-terminal 51 62.94 0 59300..61927 + 875 187926009 - Rpic_3811 - fimbrial biogenesis outer membrane usher protein 52 59.93 -1 63686..63982 + 98 187926010 - Rpic_3814 - transposase IS3/IS911 family protein 53 61.74 0 63979..64872 + 297 187926011 - Rpic_3815 - Integrase catalytic region 54 54.41 -2 64884..65552 + 222 187926012 - Rpic_3816 - Fimbrial protein 55 65.70 0 66041..66868 + 275 187926013 - Rpic_3817 - Beta-lactamase 56 67.36 0 66878..67603 - 241 187926014 - Rpic_3818 - transcriptional regulator, ArsR family 57 69.43 +1 67725..69101 + 458 187926015 - Rpic_3819 - major facilitator superfamily MFS_1 58 52.78 -2 69918..70097 + 59 187926016 - Rpic_3820 - hypothetical protein 59 63.82 0 70097..71605 + 502 187926017 - Rpic_3821 - Na+/solute symporter 60 63.91 0 71890..72288 + 132 187926018 - Rpic_3822 - hypothetical protein 61 62.11 0 72406..72690 + 94 187926019 - Rpic_3823 - hypothetical protein 62 65.25 0 72842..73264 - 140 187926020 - Rpic_3824 - GCN5-related N-acetyltransferase 63 61.90 0 73316..74386 - 356 187926021 - Rpic_3825 - arsenical-resistance protein 64 66.07 0 74460..74963 - 167 187926022 - Rpic_3826 - protein tyrosine phosphatase 65 64.39 0 74974..75456 - 160 187926023 - Rpic_3827 - Glyoxalase/bleomycin resistance protein/dioxygenase 66 65.88 0 75468..75722 - 84 187926024 - Rpic_3828 - putative transcriptional regulator, ArsR family 67 65.58 0 76071..76991 + 306 187926025 - Rpic_3829 - putative exonuclease RdgC 68 65.78 0 77049..77726 - 225 187926026 - Rpic_3830 - putative periplasmic ligand-binding sensor protein 69 65.32 0 77993..80371 + 792 187926027 - Rpic_3831 - NADH:flavin oxidoreductase/NADH oxidase 70 68.20 +1 80373..81155 + 260 187926028 - Rpic_3832 - short-chain dehydrogenase/reductase SDR 71 65.47 0 81152..81736 + 194 187926029 - Rpic_3833 - transcriptional regulator, MarR family 72 66.43 0 81754..82614 + 286 187926030 - Rpic_3834 - Enoyl-CoA hydratase/isomerase 73 68.03 0 82616..83791 + 391 187926031 - Rpic_3835 - acyl-CoA dehydrogenase domain protein 74 67.22 0 83828..85444 + 538 187926032 - Rpic_3836 - AMP-dependent synthetase and ligase 75 61.81 0 85441..85872 + 143 187926033 - Rpic_3837 - putative 4-hydroxybenzoyl-CoA thioesterase protein 76 65.65 0 85886..86278 + 130 187926034 - Rpic_3838 - Endoribonuclease L-PSP 77 62.86 0 86584..87660 - 358 187926035 - Rpic_3839 - transcriptional regulator, AraC family 78 61.36 0 87800..88195 + 131 187926036 - Rpic_3840 - Carboxymuconolactone decarboxylase 79 63.81 0 88231..89280 + 349 187926037 - Rpic_3841 - protein of unknown function DUF849 80 61.31 0 89396..90217 + 273 187926038 - Rpic_3842 - short-chain dehydrogenase/reductase SDR 81 64.02 0 90335..91618 + 427 187926039 - Rpic_3843 - major facilitator superfamily MFS_1 82 64.60 0 92176..93480 - 434 187926040 - Rpic_3844 - metabolite/H+ symporter, major facilitator superfamily (MFS) 83 66.99 0 93664..94884 - 406 187926041 - Rpic_3845 - major facilitator superfamily MFS_1 84 67.26 0 94984..95820 - 278 187926042 - Rpic_3846 - transcriptional regulator, GntR family 85 67.21 0 95985..96536 - 183 187926043 - Rpic_3847 - transcriptional regulator, HxlR family 86 67.70 0 96670..97248 + 192 187926044 - Rpic_3848 - GCN5-related N-acetyltransferase 87 65.06 0 97487..97921 + 144 187926045 - Rpic_3849 - Glyoxalase/bleomycin resistance protein/dioxygenase 88 68.50 +1 97972..98844 + 290 187926046 - Rpic_3850 - transcriptional regulator, LysR family 89 67.30 0 98945..99730 + 261 187926047 - Rpic_3851 - molybdenum ABC transporter, periplasmic molybdate-binding protein 90 68.67 +1 99735..101033 - 432 187926048 - Rpic_3852 - major facilitator superfamily MFS_1 91 68.22 +1 101195..101836 + 213 187926049 - Rpic_3853 - transcriptional regulator, TetR family 92 69.75 +1 101968..102939 + 323 187926050 - Rpic_3854 - ATPase associated with various cellular activities AAA_3 93 71.04 +1 102952..104025 + 357 187926051 - Rpic_3855 - protein of unknown function DUF58 94 69.98 +1 104022..106046 + 674 187926052 - Rpic_3856 - transglutaminase domain protein 95 70.03 +1 106559..107629 + 356 187926053 - Rpic_3857 - putative lipoprotein 96 67.59 0 107724..108911 - 395 187926054 - Rpic_3858 - AcnD-accessory protein PrpF 97 65.20 0 108908..111505 - 865 187926055 - Rpic_3859 - 2-methylisocitrate dehydratase, Fe/S-dependent 98 63.33 0 111821..112990 - 389 187926056 - Rpic_3860 - 2-methylcitrate synthase/citrate synthase II 99 64.21 0 113027..113923 - 298 187926057 - Rpic_3861 - methylisocitrate lyase 100 68.26 +1 114117..116063 + 648 187926058 - Rpic_3862 - proprionate catabolism activator, Fis family 64.67 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.