IslandPath Analysis: Staphylococcus aureus subsp. aureus N315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 33.01   STD DEV: 3.29
Staphylococcus aureus subsp. aureus N315, complete genome - 1..2814816
2588 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 32.67	0	517..1878	+	453	15925706	dnaA	SA0001	-	chromosomal replication initiation protein
2	 32.80	0	2156..3289	+	377	15925707	dnaN	SA0002	-	DNA polymerase III subunit beta
3	 35.37	0	3670..3915	+	81	15925708	-	SA0003	-	hypothetical protein
4	 33.69	0	3912..5024	+	370	15925709	recF	SA0004	-	recombination protein F
5	 36.95	+1	5034..6968	+	644	15925710	gyrB	SA0005	-	DNA gyrase subunit B
6	 36.74	+1	7005..9674	+	889	15925711	gyrA	SA0006	-	DNA gyrase subunit A
7	 36.58	+1	9762..10592	-	276	15925712	-	SA0007	-	hypothetical protein
8	 37.03	+1	10900..12414	+	504	161376701	hutH	SA0008	-	histidine ammonia-lyase
9	 34.42	0	12793..14079	+	428	15925714	serS	SA0009	-	seryl-tRNA synthetase
10	 37.07	+1	14730..15425	+	231	15925715	-	SA0010	-	hypothetical protein
11	 33.94	0	15422..15751	+	109	15925716	-	SAS001	-	hypothetical protein
12	 35.45	0	16093..17082	+	329	15925717	-	SA0011	-	hypothetical protein
13	 32.43	0	17318..18313	+	331	15925718	-	SA0012	-	hypothetical protein
14	 35.16	0	18328..20295	+	655	15925719	-	SA0013	-	hypothetical protein
15	 31.54	0	20292..20738	+	148	15925720	rplI	SA0014	-	50S ribosomal protein L9
16	 38.26	+1	20770..22170	+	466	15925721	dnaC	SA0015	-	replicative DNA helicase
17	 36.60	+1	22448..23731	+	427	15925722	purA	SA0016	-	adenylosuccinate synthetase
18	 36.44	+1	24928..25635	+	235	15925723	vicR	SA0017	-	response regulator
19	 34.92	0	25648..27474	+	608	15925724	vicK	SA0018	-	two-component sensor histidine kinase
20	 35.39	0	27440..28801	+	453	15925725	-	SA0019	-	hypothetical protein
21	 32.70	0	28802..29590	+	262	15925726	-	SA0020	-	hypothetical protein
22	 35.96	0	29979..30779	+	266	15925727	-	SA0021	-	hypothetical protein
23	 38.38	+1	31006..33324	+	772	15925728	-	SA0022	-	hypothetical protein
24	 39.38	+1	33692..34171	+	159	15925729	orfX	SA0023	-	hypothetical protein
25	 28.32	-1	34454..35749	+	431	15925730	-	SA0024	-	hypothetical protein
26	 24.58	-2	36164..36403	+	79	15925731	-	SA0025	-	hypothetical protein
27	 34.37	0	36435..37109	-	224	15925732	-	SA0026	-	transposase for IS-like element
28	 32.85	0	37200..37406	-	68	15925733	-	SA0027	-	truncated replication protein for plasmid
29	 32.58	0	37410..38204	-	264	15925734	-	SA0028	-	truncated replication protein for pUB110 plasmid
30	 30.86	0	38229..38309	-	26	15925735	-	SAS002	-	hypothetical protein
31	 33.73	0	38428..39690	-	420	15925736	pre	SA0029	-	plasmid recombination enzyme
32	 46.10	+2	39799..39939	+	46	15925737	-	SA0030	-	hypothetical protein
33	 37.50	+1	39987..40178	+	63	15925738	-	SA0031	-	hypothetical protein
34	 40.49	+2	40197..40601	-	134	15925739	bleO	SA0032	-	bleomycin resistance protein
35	 42.28	+2	40818..41588	-	256	15925740	aadD	SA0033	-	kanamycin nucleotidyltransferase
36	 34.37	0	41781..42455	-	224	15925741	-	SA0034	-	transposase for IS-like element
37	 30.12	0	42539..42880	+	113	15925742	-	SA0035	-	HMG-CoA synthase
38	 33.47	0	43717..44460	+	247	29165616	-	SA0036	-	hypothetical protein
39	 29.14	-1	44557..44985	+	142	15925744	-	SA0037	-	hypothetical protein
40	 30.64	0	45031..47037	-	668	15925745	mecA	SA0038	-	penicillin binding protein 2 prime
41	 28.67	-1	47137..48894	+	585	15925746	mecR1	SA0039	-	methicillin resistance protein
42	 25.81	-2	48894..49265	+	123	15925747	mecI	SA0040	-	methicillin resistance regulatory protein
43	 29.00	-1	49752..50882	+	376	15925748	xylR	SA0041	-	hypothetical protein
44	 30.53	0	50996..51388	-	130	15925749	-	SA0042	-	hypothetical protein
45	 33.12	0	51392..52330	-	312	15925750	-	SA0043	-	hypothetical protein
46	 32.30	0	52363..53427	-	354	15925751	-	SA0044	-	hypothetical protein
47	 24.90	-2	53563..53823	+	86	15925752	-	SA0045	-	hypothetical protein
48	 32.87	0	53823..54467	+	214	15925753	-	SA0046	-	hypothetical protein
49	 34.23	0	54806..55474	-	222	15925754	-	SA0047	-	hypothetical protein
50	 32.51	0	56002..56733	+	243	15925755	ermA	SA0048	-	rRNA methylase
51	 36.40	+1	56859..57641	-	260	15925756	ant(9)	SA0049	-	O-nucleotidylltransferase(9)
52	 29.89	0	57792..58169	-	125	15925757	tnpC	SA0050	-	transposase for Tn554
53	 33.86	0	58176..60068	-	630	15925758	tnpB	SA0051	-	transposase B for Tn554
54	 32.14	0	60065..61150	-	361	15925759	tnpA	SA0052	-	transposase A for Tn554
55	 33.96	0	61269..61586	-	105	15925760	radC	SA0053	-	hypothetical protein
56	 35.84	0	61607..62125	-	172	15925761	-	SA0054	-	hypothetical protein
57	 32.05	0	62131..62442	-	103	15925762	-	SA0055	-	hypothetical protein
58	 34.76	0	62529..62879	-	116	15925763	-	SA0056	-	hypothetical protein
59	 35.05	0	63397..65025	-	542	15925764	ccrB	SA0057	-	cassette chromosome recombinase B
60	 34.81	0	65047..66396	-	449	15925765	ccrA	SA0058	-	cassette chromosome recombinase A
61	 34.45	0	66630..68423	-	597	15925766	-	SA0059	-	hypothetical protein
62	 34.68	0	68423..68719	-	98	15925767	-	SA0060	-	hypothetical protein
63	 25.12	-2	68912..69958	-	348	15925768	-	SA0061	-	hypothetical protein
64	 32.80	0	70209..70586	-	125	15925769	-	SA0062	-	transposase
65	 30.23	0	70698..71051	-	117	29165617	tnp	SA0063	-	transposase
66	 30.79	0	71036..71350	-	104	29165618	-	SA0064	-	hypothetical protein
67	 37.26	+1	71861..72445	-	194	15925772	-	SA0065	-	hypothetical protein
68	 37.36	+1	73509..74204	-	231	15925773	kdpE	SA0066	-	hypothetical protein
69	 36.71	+1	74179..76812	-	877	15925774	kdpD	SA0067	-	hypothetical protein
70	 36.79	+1	77116..78792	+	558	29165619	kdpA	SA0068	-	potassium-transporting ATPase subunit A
71	 39.76	+2	78811..80832	+	673	15925777	kdpB	SA0070	-	hypothetical protein
72	 40.05	+2	80880..81251	+	123	15925778	kdpC	SA0071	-	hypothetical protein
73	 33.56	0	81950..82819	-	289	15925779	-	SA0072	-	hypothetical protein
74	 36.66	+1	82829..83731	-	300	15925780	-	SA0073	-	hypothetical protein
75	 40.48	+2	83767..83892	+	41	15925781	-	SAS003	-	hypothetical protein
76	 27.29	-1	83925..84404	-	159	15925782	-	SA0074	-	hypothetical protein
77	 28.83	-1	84467..84799	-	110	15925783	-	SA0075	-	hypothetical protein
78	 29.67	-1	84844..85470	-	208	15925784	-	SA0076	-	hypothetical protein
79	 31.21	0	85585..87093	+	502	15925785	-	SA0077	-	hypothetical protein
80	 25.66	-2	87692..89425	+	577	15925786	-	SA0078	-	hypothetical protein
81	 37.46	+1	89609..89947	-	112	15925787	-	SA0079	-	hypothetical protein
82	 31.48	0	90369..91124	-	251	15925788	-	SA0080	-	hypothetical protein
83	 30.65	0	91124..91384	-	86	15925789	-	SA0081	-	hypothetical protein
84	 31.64	0	91521..92585	+	354	15925790	-	SA0082	-	hypothetical protein
85	 33.48	0	92616..93950	+	444	15925791	-	SA0083	-	hypothetical protein
86	 32.66	0	93969..95162	+	397	15925792	-	SA0084	-	hypothetical protein
87	 38.91	+1	95829..96815	-	328	15925793	-	SA0085	-	hypothetical protein
88	 26.96	-1	97124..97327	+	67	15925794	-	SA0086	-	hypothetical protein
89	 30.30	0	97376..97672	+	98	15925795	-	SA0087	-	hypothetical protein
90	 31.05	0	97871..98482	+	203	15925796	-	SA0088	-	hypothetical protein
91	 31.24	0	98749..101901	+	1050	15925797	-	SA0089	-	hypothetical protein
92	 31.88	0	101958..102440	+	160	15925798	-	SA0090	-	hypothetical protein
93	 33.74	0	102646..103632	+	328	15925799	plc	SA0091	-	1-phosphatidylinositol phosphodiesterase precurosr
94	 30.09	0	103853..104623	+	256	15925800	-	SA0092	-	hypothetical protein
95	 29.31	-1	104675..105445	+	256	15925801	-	SA0093	-	hypothetical protein
96	 29.95	0	105513..106280	+	255	15925802	-	SA0094	-	hypothetical protein
97	 29.05	-1	106345..107115	+	256	15925803	-	SA0095	-	hypothetical protein
98	 30.86	0	107182..107949	+	255	15925804	-	SA0096	-	hypothetical protein
99	 33.69	0	108046..110283	+	745	15925805	-	SA0097	-	hypothetical protein
100	 37.23	+1	110434..111612	+	392	15925806	-	SA0098	-	hypothetical protein
33.01	MEAN

3.29	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.