IslandPath Analysis: Mycobacterium tuberculosis CDC1551



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 65.22   STD DEV: 3.49
Mycobacterium tuberculosis CDC1551, complete genome - 1..4403837
4189 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 58.92	-1	1..1524	+	507	15839373	dnaA	MT0001	-	chromosomal replication initiation protein
2	 59.97	-1	2052..3260	+	402	15839374	dnaN	MT0002	-	DNA polymerase III subunit beta
3	 60.02	-1	3280..4437	+	385	15839375	recF	MT0003	-	recombination protein F
4	 66.13	0	4434..4997	+	187	15839376	-	MT0004	-	hypothetical protein
5	 60.12	-1	5207..7267	+	686	15839377	gyrB	MT0005	-	DNA gyrase subunit B
6	 63.85	0	7302..9818	+	838	15839378	gyrA	MT0006	-	DNA gyrase subunit A
7	 68.20	0	9914..10828	+	304	15839379	-	MT0007	-	hypothetical protein
8	 62.32	0	11555..11692	-	45	15839380	-	MT0009	-	hypothetical protein
9	 71.00	+1	11874..12311	-	145	15839381	-	MT0010	-	hypothetical protein
10	 62.48	0	12468..13016	+	182	15839382	ppi-1	MT0011	-	peptidyl-prolyl cis-trans isomerase
11	 67.32	0	13024..13176	-	50	15839383	-	MT0012	-	hypothetical protein
12	 62.44	0	13133..13558	-	141	15839384	-	MT0013	-	hypothetical protein
13	 56.38	-2	13714..13995	-	93	15839385	-	MT0014	-	putative septation inhibitor protein
14	 64.89	0	14089..14877	+	262	15839386	-	MT0015	-	hypothetical protein
15	 63.95	0	14914..15612	+	232	15839387	-	MT0016	-	para-aminobenzoate synthase component II
16	 63.26	0	15590..17470	-	626	15839388	-	MT0017	-	serine/threonine protein kinase
17	 67.67	0	17467..18762	-	431	15839389	-	MT0018	-	serine/threonine protein kinase
18	 64.50	0	18759..20234	-	491	15839390	-	MT0019	-	penicillin-binding protein, putative
19	 62.13	0	20231..21640	-	469	15839391	ftsW-1	MT0020	-	cell division protein FtsW
20	 67.38	0	21637..23172	-	511	15839392	-	MT0021	-	hypothetical protein
21	 63.03	0	23270..23737	-	155	15839393	-	MT0022	-	hypothetical protein
22	 66.35	0	23861..25426	-	521	15839394	-	MT0023	-	hypothetical protein
23	 66.05	0	25895..26863	-	322	15839395	-	MT0024	-	2-nitropropane dioxygenase
24	 67.96	0	26975..27283	+	102	15839396	-	MT0025	-	hypothetical protein
25	 67.32	0	27577..28347	+	256	15839397	-	MT0026	-	DNA-binding protein, putative
26	 69.03	+1	28344..29189	+	281	15839398	-	MT0027	-	NLP/P60 family protein
27	 64.84	0	29227..29499	+	90	15839399	-	MT0028	-	hypothetical protein
28	 65.03	0	29703..31049	+	448	15839400	-	MT0029	-	hypothetical protein
29	 62.89	0	31170..31487	+	105	15839401	-	MT0030	-	hypothetical protein
30	 64.04	0	31573..31800	+	75	15839402	-	MT0030.1	-	hypothetical protein
31	 62.50	0	31805..31948	-	47	15839403	-	MT0031	-	hypothetical protein
32	 64.59	0	32031..32609	-	192	15839404	-	MT0032	-	hypothetical protein
33	 67.11	0	32646..33098	+	150	15839405	-	MT0033	-	hypothetical protein
34	 65.45	0	33168..33497	+	109	15839406	-	MT0034	-	hypothetical protein
35	 66.67	0	33526..33738	+	70	15839407	-	MT0035	-	hypothetical protein
36	 60.85	-1	33844..34101	-	85	15839408	-	MT0036	-	hypothetical protein
37	 62.05	0	34239..36554	+	771	15839409	-	MT0037	-	aminotransferase, class II
38	 56.82	-2	36551..36814	+	87	15839410	acp-1	MT0038	-	acyl carrier protein
39	 65.66	0	36811..37206	+	131	15839411	-	MT0039	-	hypothetical protein
40	 63.59	0	37203..38891	+	562	15839412	-	MT0040	-	AMP-binding family protein
41	 68.73	+1	39000..39773	-	257	15839413	-	MT0041	-	hypothetical protein
42	 67.82	0	39821..41122	-	433	15839414	-	MT0042	-	hypothetical protein
43	 65.35	0	41248..41856	+	202	15839415	-	MT0043	-	hypothetical protein
44	 71.84	+1	41948..42295	-	115	15839416	-	MT0044	-	hypothetical protein
45	 67.52	0	42377..43309	-	310	15839417	mtc28	MT0046	-	proline rich 28 kDa antigen
46	 62.96	0	43506..46415	+	969	15839418	leuS	MT0047	-	leucyl-tRNA synthetase
47	 63.80	0	46525..47151	-	208	15839419	-	MT0048	-	MarR family transcriptional regulator
48	 63.67	0	47310..48044	-	244	15839420	-	MT0049	-	GntR family transcriptional regulator
49	 66.54	0	48177..48971	-	264	15839421	-	MT0050	-	hypothetical protein
50	 67.11	0	48987..49883	-	298	15839422	-	MT0051	-	hypothetical protein
51	 64.04	0	49965..51068	-	367	15839423	-	MT0052	-	1L-myo-inositol-1-phosphate synthase
52	 66.48	0	51129..51671	-	180	15839424	-	MT0053	-	hypothetical protein
53	 65.98	0	51772..52641	-	289	15839425	-	MT0054	-	hypothetical protein
54	 66.67	0	52775..53188	+	137	15839426	-	MT0055	-	hypothetical protein
55	 65.16	0	53181..55643	+	820	15839427	ponA	MT0056	-	penicillin-binding protein
56	 64.59	0	55685..57322	+	545	15839428	-	MT0057	-	hypothetical protein
57	 65.88	0	57279..57917	+	212	15839429	-	MT0058	-	hypothetical protein
58	 60.14	-1	58136..58426	+	96	15839430	rpsF	MT0059	-	30S ribosomal protein S6
59	 66.67	0	58530..59024	+	164	15839431	ssb	MT0060	-	single-strand DNA-binding protein
60	 64.71	0	59066..59320	+	84	15839432	rpsR	MT0061	-	30S ribosomal protein S18
61	 62.09	0	59