version 1.0
Escherichia coli UTI89, complete genome - 1..5065741 5021 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 51.52 0 190..255 + 21 91209056 thrL UTI89_C0001 - thr operon leader peptide 2 52.78 0 336..2798 + 820 91209057 thrA UTI89_C0002 - bifunctional aspartokinase I/homeserine dehydrogenase I 3 55.63 +1 2800..3732 + 310 91209058 thrB UTI89_C0003 - homoserine kinase 4 52.84 0 3733..5019 + 428 91209059 thrC UTI89_C0004 - threonine synthase 5 53.87 0 5233..5529 + 98 91209060 yaaX UTI89_C0005 - hypothetical protein 6 53.01 0 5309..5557 - 82 91209061 - UTI89_C0006 - hypothetical protein 7 49.03 0 5569..6345 - 258 91209062 yaaA UTI89_C0007 - hypothetical protein 8 53.32 0 6415..7845 - 476 91209063 yaaJ UTI89_C0008 - putative transporter YaaJ 9 51.99 0 8124..9077 + 317 162138515 talB UTI89_C0009 - transaldolase B 10 54.15 0 9189..9779 + 196 91209065 mogA UTI89_C0010 - molybdenum cofactor biosynthesis protein 11 52.73 0 9984..10550 - 188 91209066 yaaH UTI89_C0011 - hypothetical protein 12 50.98 0 10699..11412 - 237 91209067 yaaW UTI89_C0012 - hypothetical protein 13 47.65 0 11438..11842 - 134 91209069 yaaI UTI89_C0014 - hypothetical protein 14 50.96 0 12172..14208 - 678 91209070 - UTI89_C0015 - putative glutamate dehydrogenase 15 51.12 0 12214..14130 + 638 91209071 dnaK UTI89_C0016 - molecular chaperone DnaK 16 54.82 0 14219..15349 + 376 91209072 dnaJ UTI89_C0017 - chaperone protein DnaJ 17 51.43 0 15454..15663 - 69 91209073 gef UTI89_C0018 - gef membrane toxin 18 40.55 -1 16218..16979 + 253 91209074 - UTI89_C0019 - hypothetical protein 19 44.90 -1 16963..18492 + 509 91209075 - UTI89_C0020 - hypothetical protein 20 43.49 -1 18621..19880 + 419 91209076 - UTI89_C0021 - hypothetical protein 21 50.47 0 20115..21281 + 388 91209077 nhaA UTI89_C0022 - pH-dependent sodium/proton antiporter 22 47.44 0 21347..22246 + 299 162138514 nhaR UTI89_C0023 - transcriptional activator NhaR 23 46.85 0 22258..22590 + 110 91209079 - UTI89_C0024 - hypothetical protein 24 46.21 0 22342..22605 - 87 91209080 rpsT UTI89_C0025 - 30S ribosomal protein S20 25 48.40 0 22708..22926 + 72 91209081 yaaY UTI89_C0026 - hypothetical protein 26 52.97 0 22934..23875 + 313 91209082 ribF UTI89_C0027 - bifunctional riboflavin kinase/FMN adenylyltransferase 27 54.46 0 23918..26734 + 938 91209083 ileS UTI89_C0028 - isoleucyl-tRNA synthetase 28 52.32 0 26734..27228 + 164 91209084 lspA UTI89_C0029 - lipoprotein signal peptidase 29 54.67 0 27336..27785 + 149 91209085 slpA UTI89_C0030 - FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) 30 55.21 0 27787..28737 + 316 91209086 ispH UTI89_C0031 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 31 55.08 0 28803..29717 + 304 91209087 yaaF UTI89_C0032 - ribonucleoside hydrolase RihC 32 44.26 -1 29740..30105 + 121 91209088 - UTI89_C0033 - hypothetical protein 33 53.28 0 30266..31087 + 273 91209089 dapB UTI89_C0034 - dihydrodipicolinate reductase 34 27.27 -2 31099..31296 - 65 91209090 - UTI89_C0035 - hypothetical protein 35 52.89 0 31516..32691 + 391 91209091 carA UTI89_C0036 - carbamoyl phosphate synthase small subunit 36 55.87 +1 32709..35930 + 1073 91209092 carB UTI89_C0037 - carbamoyl phosphate synthase large subunit 37 46.08 0 36103..36612 + 169 91209093 - UTI89_C0038 - transposase 38 40.18 -1 36649..36867 - 72 91209094 - UTI89_C0039 - hypothetical protein 39 46.97 0 36902..37297 + 131 162138513 caiF UTI89_C0040 - DNA-binding transcriptional activator CaiF 40 55.23 0 37416..38027 - 203 91209096 caiE UTI89_C0041 - carnitine operon protein CaiE 41 52.68 0 38012..38905 - 297 91209097 caiD UTI89_C0042 - carnitinyl-CoA dehydratase 42 50.86 0 38906..40474 - 522 91209098 caiC UTI89_C0043 - putative crotonobetaine/carnitine-CoA ligase 43 52.79 0 40532..41749 - 405 91209099 caiB UTI89_C0044 - crotonobetainyl-CoA:carnitine CoA-transferase 44 53.46 0 41877..43019 - 380 91209100 caiA UTI89_C0045 - crotonobetainyl-CoA dehydrogenase 45 52.34 0 43050..44564 - 504 91209101 caiT UTI89_C0046 - L-carnitine/gamma-butyrobetaine antiporter 46 51.75 0 45037..45807 + 256 162138512 fixA UTI89_C0047 - putative electron transfer flavoprotein FixA 47 56.79 +1 45822..46763 + 313 91209103 fixB UTI89_C0048 - putative electron transfer flavoprotein FixB 48 54.62 0 46814..48100 + 428 91209104 fixC UTI89_C0049 - putative oxidoreductase FixC 49 56.94 +1 48097..48384 + 95 91209105 fixX UTI89_C0050 - putative ferredoxin 50 53.45 0 48443..49774 + 443 91209106 yaaU UTI89_C0051 - metabolite transport protein YaaU 51 54.24 0 49882..50412 + 176 91209107 yabF UTI89_C0052 - glutathione-regulated potassium-efflux system ancillary protein KefF 52 55.29 0 50405..52267 + 620 91209108 kefC UTI89_C0053 - glutathione-regulated potassium-efflux system protein KefC 53 52.03 0 52324..52938 + 204 91209109 folA UTI89_C0054 - dihydrofolate reductase 54 48.72 0 53024..53257 + 77 91209110 - UTI89_C0055 - putative antitoxin of gyrase inhibiting toxin-antitoxin system 55 55.36 0 53572..54420 - 282 91209111 apaH UTI89_C0056 - diadenosine tetraphosphatase 56 52.12 0 54427..54804 - 125 91209112 apaG UTI89_C0057 - ApaG 57 53.77 0 54807..55628 - 273 91209113 ksgA UTI89_C0058 - dimethyladenosine transferase 58 55.66 +1 55625..56614 - 329 91209114 pdxA UTI89_C0059 - 4-hydroxythreonine-4-phosphate dehydrogenase 59 53.92 0 56614..57900 - 428 91209115 surA UTI89_C0060 - peptidyl-prolyl cis-trans isomerase SurA 60 51.80 0 57953..60307 - 784 91209116 imp UTI89_C0061 - organic solvent tolerance protein 61 52.57 0 60562..61377 + 271 162138511 djlA UTI89_C0062 - DNA-J like membrane chaperone protein 62 54.39 0 61527..62186 - 219 91209118 rluA UTI89_C0063 - 23S rRNA/tRNA pseudouridine synthase A 63 55.28 0 62198..65104 - 968 91209119 hepA UTI89_C0064 - ATP-dependent helicase HepA 64 55.57 0 65268..67619 - 783 91209120 polB UTI89_C0065 - DNA polymerase II 65 55.46 0 67694..68389 - 231 91209121 araD UTI89_C0066 - L-ribulose-5-phosphate 4-epimerase 66 55.09 0 68674..70176 - 500 91209122 araA UTI89_C0067 - L-arabinose isomerase 67 58.20 +1 70187..71887 - 566 91209123 araB UTI89_C0068 - ribulokinase 68 52.06 0 72175..73071 + 298 91209124 araC UTI89_C0069 - DNA-binding transcriptional regulator AraC 69 47.15 0 73336..73458 + 40 91209125 - UTI89_C0070 - hypothetical protein 70 35.62 -2 73583..74194 + 203 91209126 - UTI89_C0071 - hypothetical protein 71 30.97 -2 74440..74862 + 140 91209127 - UTI89_C0072 - hypothetical protein 72 54.38 0 75017..75781 + 254 91209128 yabI UTI89_C0073 - putative integral membrane protein YabI 73 56.11 +1 75895..76614 - 239 91209129 thiQ UTI89_C0074 - thiamine transporter ATP-binding subunit 74 58.04 +1 76577..78187 - 536 91209130 thiP UTI89_C0075 - thiamine transporter membrane protein 75 51.32 0 78163..79146 - 327 162138510 tbpA UTI89_C0076 - thiamine transporter substrate binding subunit 76 55.22 0 79310..80986 - 558 91209132 yabN UTI89_C0077 - transcriptional regulator SgrR 77 51.82 0 81293..81898 - 201 91209133 leuD UTI89_C0078 - isopropylmalate isomerase small subunit 78 55.53 0 81909..83309 - 466 91209134 leuC UTI89_C0079 - isopropylmalate isomerase large subunit 79 54.89 0 83312..84406 - 364 91209135 leuB UTI89_C0080 - 3-isopropylmalate dehydrogenase 80 52.74 0 84403..85974 - 523 91209136 leuA UTI89_C0081 - 2-isopropylmalate synthase 81 45.98 0 86066..86152 - 28 91209137 leuL UTI89_C0082 - leu operon leader peptide 82 30.08 -2 86611..86733 + 40 91209138 - UTI89_C0083 - hypothetical protein 83 46.24 0 86810..87754 + 314 91209139 leuO UTI89_C0084 - leucine transcriptional activator 84 53.22 0 88072..89796 + 574 162138509 ilvI UTI89_C0085 - acetolactate synthase 3 catalytic subunit 85 50.41 0 89799..90290 + 163 162138508 ilvH UTI89_C0086 - acetolactate synthase 3 regulatory subunit 86 44.79 -1 90293..90388 + 31 91209142 fruL UTI89_C0087 - FruR leader peptide 87 38.64 -2 90342..90473 + 43 91209143 - UTI89_C0088 - hypothetical protein 88 55.32 0 90470..91474 + 334 91209144 fruR UTI89_C0089 - DNA-binding transcriptional regulator FruR 89 52.73 0 92040..92534 + 164 91209145 mraZ UTI89_C0090 - cell division protein MraZ 90 55.63 +1 92536..93477 + 313 91209146 mraW UTI89_C0091 - S-adenosyl-methyltransferase MraW 91 50.55 0 93474..93839 + 121 91209147 ftsL UTI89_C0092 - cell division protein FtsL 92 53.65 0 93855..95621 + 588 91209148 ftsI UTI89_C0093 - peptidoglycan synthetase FtsI precursor 93 56.85 +1 95608..97095 + 495 91209149 murE UTI89_C0094 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 94 54.08 0 97092..98450 + 452 91209150 murF UTI89_C0095 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 95 53.28 0 98444..99526 + 360 91209151 mraY UTI89_C0096 - phospho-N-acetylmuramoyl-pentapeptide-transferase 96 55.43 0 99529..100845 + 438 91209152 murD UTI89_C0097 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 97 52.64 0 100842..102089 + 415 91209153 ftsW UTI89_C0098 - cell division protein FtsW 98 55.90 +1 102086..103153 + 355 91209154 murG UTI89_C0099 - N-acetylglucosaminyl transferase 99 54.20 0 103207..104682 + 491 91209155 murC UTI89_C0100 - UDP-N-acetylmuramate--L-alanine ligase 100 51.36 0 104675..105595 + 306 91209156 ddl UTI89_C0101 - D-alanine--D-alanine ligase 50.39 MEAN 5.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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