version 1.0
Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome - 1..751719 614 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 24.67 0 1..1374 + 457 13357559 dnaA UU001 - chromosomal replication initiator protein 2 27.78 0 1515..1802 + 95 13357560 rpL31 UU002 - ribosomal protein L31 3 32.04 +1 1935..3014 + 359 13357561 prfA UU003 - peptide chain release factor 1 4 22.45 0 3014..3886 + 290 13358170 hemK UU004m - hypothetical protein 5 28.29 0 3873..4427 + 184 13358171 - UU005m - hypothetical protein 6 30.54 +1 4431..4895 + 154 13357562 lacA UU006 - galactoside O-acetyltransferase 7 30.66 +1 4991..5551 + 186 13357563 - UU007 - hypothetical protein 8 32.49 +1 5554..6030 + 158 13357564 - UU008 - hypothetical protein 9 25.75 0 6175..7797 + 540 13357565 mgtE UU009 - Mg2+ ion transporter 10 32.34 +1 7954..8454 + 166 13357566 rplJ UU010 - 50S ribosomal protein L10 11 35.25 +2 8479..8844 + 121 13357567 rplL UU011 - 50S ribosomal protein L7/L12 12 28.82 0 9069..10619 - 516 13357568 - UU012 - membrane lipoprotein 13 30.32 +1 11005..11934 - 309 13357569 rbsC-2 UU013 - ribose/galactose ABC transporter 14 25.51 0 11934..14144 - 736 13357570 rbsC-1 UU014 - ribose/galactose ABC transporter 15 28.48 0 14147..15754 - 535 13357571 mglA UU015 - methylgalactoside permease ATP-binding protein 16 30.16 +1 15810..17384 - 524 13357572 - UU016 - lipoprotein 17 26.82 0 17555..18352 - 265 13357573 - UU017 - hypothetical protein 18 25.59 0 18354..19670 - 438 13357574 trmE UU018 - tRNA modification GTPase TrmE 19 20.00 -1 19673..20467 - 264 13357575 dnaH UU019 - DNA polymerase III delta subunit 20 24.07 0 20468..21169 - 233 13357576 tmk UU020 - thymidylate kinase 21 24.02 0 21141..22010 - 289 13357577 lip3 UU021 - triacylglycerol lipase 22 23.95 0 22110..23132 - 340 13357578 fatC-1 UU022 - ferrichrome ABC transporter 23 25.24 0 23133..24158 - 341 13357579 fatD-1 UU023 - ferrichrome ABC transporter 24 23.64 0 24175..25587 - 470 13357580 ABCsbp-1 UU024 - putative ABC substrate-binding protein - iron 25 25.82 0 25611..26714 - 367 13357581 fecC UU025 - ferrichrome ABC transporter 26 29.05 0 26879..27928 - 349 13357582 rpsB UU026 - 30S ribosomal protein S2 27 23.15 0 28028..28999 - 323 13357583 ABCsbp-2 UU027 - putative ABC substrate-binding protein - iron 28 23.29 0 29014..29760 - 248 13357584 ABCsbp-3 UU028 - putative ABC substrate-binding protein - iron 29 24.61 0 29766..31886 - 706 13357585 - UU029 - hypothetical protein 30 25.04 0 31996..34239 + 747 13357586 - UU030 - hypothetical protein 31 20.26 -1 34634..35398 + 254 13357587 - UU031 - membrane lipoprotein 32 21.97 -1 35490..36017 - 175 13357588 - UU032 - hypothetical protein 33 24.47 0 36025..36498 - 157 13357589 - UU033 - hypothetical protein 34 25.00 0 36548..37615 - 355 13357590 - UU034 - hypothetical protein 35 22.92 0 37719..38477 - 252 13357591 - UU035 - hypothetical protein 36 20.14 -1 38712..39545 - 277 13357592 - UU036 - hypothetical protein 37 21.72 -1 39640..39906 - 88 13357593 - UU037 - hypothetical protein 38 25.07 0 40330..41721 + 463 13357594 - UU038 - hypothetical protein 39 29.92 +1 41797..43641 + 614 13357595 gidA UU039 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 40 24.19 0 43700..44344 + 214 13357596 gidB UU040 - glucose inhibited division protein B 41 22.59 0 44367..44729 + 120 13357597 - UU041 - hypothetical protein 42 22.30 0 44729..45145 + 138 13357598 - UU042 - hypothetical protein 43 28.37 0 45312..47828 + 838 13357599 - UU043 - membrane lipoprotein 44 31.08 +1 47851..50199 + 782 13357600 - UU044 - hypothetical protein 45 27.15 0 50230..52734 + 834 13357601 - UU045 - membrane lipoprotein 46 31.31 +1 52771..55146 + 791 13357602 - UU046 - hypothetical protein 47 27.04 0 55161..57764 + 867 13357603 - UU047 - ATP/GTP-binding protein 48 22.27 0 57794..59284 + 496 13357604 - UU048 - hypothetical protein 49 20.16 -1 59271..59786 + 171 13357605 - UU049 - hypothetical protein 50 20.55 -1 59789..60703 + 304 13357606 - UU050 - hypothetical protein 51 19.88 -1 60660..61172 + 170 13357607 - UU051 - hypothetical protein 52 23.87 0 61162..63327 + 721 13357608 - UU052 - hypothetical protein 53 27.60 0 63343..64878 + 511 13357609 atpA-1 UU053 - F0F1 ATP synthase subunit alpha 54 28.50 0 64878..66242 + 454 13357610 atpD-1 UU054 - F0F1 ATP synthase subunit beta 55 25.17 0 66507..69923 + 1138 13357611 mnuA-1 UU055 - hypothetical protein 56 25.33 0 70018..70242 + 74 13357612 secG UU056 - preprotein translocase subunit SecG 57 27.38 0 70243..72408 + 721 13357613 vacB UU057 - virulence associated protein - exoribonuclease 58 27.70 0 72608..73033 + 141 13357614 smpB UU058 - SsrA-binding protein 59 25.91 0 73014..74792 + 592 13357615 msbA-1 UU059 - transport ATP-binding protein 60 25.71 0 74767..76563 + 598 13357616 msbA-2 UU060 - transport ATP-binding protein 61 23.02 0 76623..77417 + 264 13357617 - UU061 - hypothetical protein 62 27.40 0 77527..79008 + 493 13357618 lysS UU062 - lysyl-tRNA synthetase 63 26.00 0 79296..79772 - 158 13357619 - UU063 - hypothetical protein 64 19.48 -1 79940..80206 - 88 13357620 - UU064 - hypothetical protein 65 26.44 0 80231..82057 - 608 13357621 pepF-1 UU065 - oligoendopeptidase F - zinc metalloprotease 66 23.81 0 82145..83026 + 293 13357622 pta UU066 - phosphotransacetylase 67 20.16 -1 83073..83687 - 204 13357623 - UU067 - hypothetical protein 68 26.64 0 83725..84381 - 218 13357624 - UU068 - hypothetical protein 69 23.52 0 84472..85347 - 291 13357625 fecE UU069 - iron(III) dicitrate transport ATP-binding protein 70 26.52 0 85352..86422 - 356 13357626 hmuU-1 UU070 - hemin transport system permease 71 25.56 0 86441..88408 - 655 13357627 ABCsbp-4 UU071 - putative ABC substrate-binding protein - iron 72 25.58 0 88641..89969 + 442 13357628 hlyC UU072 - hemolysin 73 24.17 0 89987..90979 - 330 13357629 - UU073 - hypothetical protein 74 29.35 0 90945..91874 - 309 13357630 trxB UU074 - thioredoxin reductase 75 29.46 0 91893..92900 - 335 13357631 lgt UU075 - prolipoprotein diacylglyceryl transferase 76 26.75 0 92901..93827 - 308 13357632 hprK UU076 - HPr kinase/phosphorylase 77 24.25 0 93842..94843 - 333 13357633 - UU077 - hypothetical protein 78 25.85 0 94806..95366 - 186 13357634 pth UU078 - peptidyl-tRNA hydrolase 79 23.60 0 95588..96727 + 379 13357635 dnaN UU079 - DNA pol III beta chain 80 22.83 0 96865..97083 + 72 13357636 - UU080 - hypothetical protein 81 30.72 +1 97095..99047 + 650 13357637 gyrB UU081 - DNA gyrase subunit B 82 29.73 +1 99069..101591 + 840 13357638 gyrA UU082 - DNA gyrase subunit A 83 28.87 0 101699..102169 + 156 13357639 - UU083 - hypothetical protein 84 27.66 0 102208..103212 + 334 13357640 recA UU084 - recombinase A 85 27.14 0 103244..104665 + 473 13357641 - UU085 - hypothetical protein 86 26.47 0 104864..105562 - 232 13357642 dgk UU086 - deoxyguanosine kinase 87 22.69 0 105760..107553 + 597 13357643 dnaX UU087 - DNA polymerase III subunits gamma and tau 88 28.33 0 107561..107860 + 99 13357644 - UU088 - hypothetical protein 89 26.73 0 107869..108474 + 201 13357645 recR UU089 - recombination protein RecR 90 27.78 0 108529..108798 + 89 13357646 - UU089.1 - hypothetical protein 91 27.92 0 108844..110598 + 584 13357647 - UU090 - hypothetical protein 92 30.36 +1 111214..112560 + 448 13357648 ffh UU091 - signal recognition particle 93 21.81 -1 112772..114559 + 595 13357649 - UU092 - membrane lipoprotein 94 24.89 0 114559..115269 + 236 13357650 bcrA UU093 - ABC transporter 95 23.54 0 115391..118555 + 1054 13357651 - UU094 - membrane lipoprotein 96 24.19 0 120158..123295 - 1045 13357652 hsdR UU095 - type I restriction enzyme R protein 97 23.18 0 123316..123837 - 173 13357653 hsdS-1 UU096 - type I restriction enzyme S protein (fragment) 98 29.05 0 123975..124184 - 69 13357654 hsdS-2 UU097 - type I restriction enzyme S protein (fragment) 99 26.84 0 124317..125363 + 348 13357655 hsdM-1 UU098 - type I restriction enzyme M protein (fragment) 100 23.73 0 125367..126272 + 301 13357656 hsdS-3 UU099 - type I restriction enzyme S protein (fragment) 25.85 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.