version 1.0
Burkholderia phymatum STM815 chromosome 2, complete sequence - 1..2697374 2349 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 67.17 +1 28..624 - 198 186471974 - Bphy_3102 - putative lipoprotein 2 62.52 0 737..1435 - 232 186471975 - Bphy_3103 - hypothetical protein 3 67.19 +1 1620..2570 + 316 186471976 - Bphy_3104 - putative PTS IIA-like nitrogen-regulatory protein PtsN 4 68.69 +1 2614..3207 - 197 186471977 - Bphy_3105 - hypothetical protein 5 61.99 0 3387..3707 + 106 186471978 - Bphy_3106 - hypothetical protein 6 73.52 +2 3747..3965 + 72 186471979 - Bphy_3107 - FmdB family regulatory protein 7 67.09 +1 4050..4988 + 312 186471980 - Bphy_3108 - LysR family transcriptional regulator 8 67.87 +1 5093..6337 + 414 186471981 - Bphy_3109 - major facilitator transporter 9 65.04 0 6443..7117 - 224 186471982 - Bphy_3110 - two component transcriptional regulator 10 64.94 0 7319..8647 - 442 186471983 - Bphy_3111 - integral membrane sensor signal transduction histidine kinase 11 67.64 +1 8881..9189 - 102 186471984 - Bphy_3112 - hypothetical protein 12 59.84 0 9287..9535 + 82 186471985 - Bphy_3113 - hypothetical protein 13 63.44 0 9590..9775 + 61 186471986 - Bphy_3114 - hypothetical protein 14 65.79 0 9835..10290 + 151 186471987 - Bphy_3115 - hypothetical protein 15 66.46 0 10511..11461 + 316 186471988 - Bphy_3116 - taurine dioxygenase 16 65.87 0 11487..12611 - 374 186471989 - Bphy_3117 - heat shock protein DnaJ domain-containing protein 17 62.66 0 12787..13785 - 332 186471990 - Bphy_3118 - hypothetical protein 18 59.62 0 14272..14484 - 70 186471991 - Bphy_3119 - hypothetical protein 19 63.95 0 14658..15689 - 343 186471992 - Bphy_3120 - phosphate ABC transporter, periplasmic phosphate-binding protein 20 68.28 +1 15886..17373 - 495 186471993 - Bphy_3121 - transcriptional regulator 21 64.62 0 17578..17919 + 113 186471994 - Bphy_3122 - hypothetical protein 22 65.37 0 17953..19107 - 384 186471995 - Bphy_3123 - DNA-directed DNA polymerase 23 64.05 0 19271..19576 - 101 186471996 - Bphy_3124 - hypothetical protein 24 65.75 0 19573..19791 - 72 186471997 - Bphy_3125 - hypothetical protein 25 63.12 0 20007..21191 - 394 186471998 - Bphy_3126 - porin 26 64.86 0 21259..23700 - 813 186471999 - Bphy_3127 - glycoside hydrolase family protein 27 65.21 0 23724..25031 - 435 186472000 - Bphy_3128 - major facilitator transporter 28 51.79 -2 25068..25403 + 111 186472001 - Bphy_3129 - hypothetical protein 29 63.74 0 25871..26041 - 56 186472002 - Bphy_3130 - hypothetical protein 30 64.82 0 26362..27120 + 252 186472003 - Bphy_3131 - putative glutathione S-transferase 31 65.88 0 27262..27900 + 212 186472004 - Bphy_3132 - lysine exporter protein LysE/YggA 32 66.98 +1 27908..28852 - 314 186472005 - Bphy_3133 - hypothetical protein 33 67.57 +1 28957..31275 - 772 186472006 - Bphy_3134 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 34 63.67 0 31367..32200 - 277 186472007 - Bphy_3135 - hypothetical protein 35 60.12 0 32261..32932 - 223 186472008 - Bphy_3136 - multiple antibiotic resistance (MarC)-related protein 36 61.50 0 33246..33458 + 70 186472009 - Bphy_3137 - hypothetical protein 37 61.66 0 33455..34933 + 492 186472010 - Bphy_3138 - Na+/solute symporter 38 62.98 0 35056..35787 - 243 186472011 - Bphy_3139 - precorrin-4 C11-methyltransferase 39 66.53 +1 35784..36521 - 245 186472012 - Bphy_3140 - precorrin-6x reductase 40 66.30 0 36518..37618 - 366 186472013 - Bphy_3141 - cobalamin biosynthesis protein CbiD 41 69.98 +1 37618..38823 - 401 186472014 - Bphy_3142 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 42 66.67 +1 39178..40575 + 465 186472015 - Bphy_3143 - precorrin-3B synthase 43 68.70 +1 40556..41194 + 212 186472016 - Bphy_3144 - precorrin-8X methylmutase 44 64.81 0 41195..41950 + 251 186472017 - Bphy_3145 - precorrin-2 C20-methyltransferase 45 68.70 +1 41947..43665 + 572 186472018 - Bphy_3146 - precorrin-3B C17-methyltransferase 46 65.51 0 43826..44779 + 317 186472019 - Bphy_3147 - type IV pilus assembly PilZ 47 66.58 +1 44904..46019 - 371 186472020 - Bphy_3148 - OmpA/MotB domain-containing protein 48 63.33 0 46071..54677 - 2868 186472021 - Bphy_3149 - hemagluttinin domain-containing protein 49 62.50 0 55130..55777 - 215 186472022 - Bphy_3150 - magnesium chelatase subunit ChlD 50 63.27 0 55807..56835 - 342 186472023 - Bphy_3151 - magnesium chelatase 51 64.85 0 56832..60635 - 1267 186472024 - Bphy_3152 - cobaltochelatase, CobN subunit 52 63.33 0 60646..61755 - 369 186472025 - Bphy_3153 - cobalamin biosynthesis protein CobW 53 68.15 +1 62775..63518 + 247 186472026 - Bphy_3154 - uroporphyrin-III C-methyltransferase 54 66.67 +1 63515..63949 + 144 186472027 - Bphy_3155 - cobalamin (vitamin B12) biosynthesis CbiG protein 55 63.02 0 63946..64548 + 200 186472028 - Bphy_3156 - cob(I)alamin adenosyltransferase 56 68.20 +1 64552..65856 + 434 186472029 - Bphy_3157 - glutamine amidotransferase 57 66.67 +1 65840..66535 + 231 186472030 - Bphy_3158 - cob(II)yrinic acid a,c-diamide reductase 58 64.05 0 66565..67251 - 228 186472031 - Bphy_3159 - two component transcriptional regulator 59 63.86 0 68114..69004 - 296 186472032 - Bphy_3160 - DeoR family transcriptional regulator 60 64.73 0 69118..71601 + 827 186472033 - Bphy_3161 - FAD dependent oxidoreductase 61 68.30 +1 71625..72482 - 285 186472034 - Bphy_3162 - AraC family transcriptional regulator 62 65.65 0 72675..73556 + 293 186472035 - Bphy_3163 - NmrA family protein 63 64.78 0 74700..75017 - 105 186472036 - Bphy_3165 - transposase IS3/IS911 family protein 64 55.43 -1 75755..76021 - 88 186472037 - Bphy_3167 - hypothetical protein 65 58.94 0 76349..77254 - 301 186472038 - Bphy_3168 - LysR family transcriptional regulator 66 58.83 -1 79549..80556 - 335 186472039 - Bphy_3172 - quinone oxidoreductase 67 55.92 -1 80895..81908 + 337 186472040 - Bphy_3173 - adenosine deaminase 68 57.83 -1 81901..83100 + 399 186472041 - Bphy_3174 - L-lactate dehydrogenase (cytochrome) 69 55.25 -1 83465..84568 + 367 186472042 - Bphy_3175 - NMT1/THI5-like domain-containing protein 70 55.74 -1 84670..85584 + 304 186472043 - Bphy_3176 - LysR family transcriptional regulator 71 59.48 0 87447..89603 + 718 186472044 - Bphy_3178 - CoA-binding domain-containing protein 72 57.13 -1 89600..90427 + 275 186472045 - Bphy_3179 - enoyl-CoA hydratase/isomerase 73 57.39 -1 90473..91237 + 254 186472046 - Bphy_3180 - ABC transporter related 74 54.32 -2 91237..92070 + 277 186472047 - Bphy_3181 - binding-protein-dependent transport systems inner membrane component 75 59.18 0 92112..92525 + 137 186472048 - Bphy_3182 - hypothetical protein 76 57.98 -1 92538..93308 + 256 186472049 - Bphy_3183 - class II aldolase/adducin family protein 77 60.53 0 93305..94315 + 336 186472050 - Bphy_3184 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 78 53.51 -2 94397..95422 + 341 186472051 - Bphy_3185 - adenosine deaminase 79 55.61 -1 95489..96628 - 379 186472052 - Bphy_3186 - porin 80 58.23 -1 96892..97815 - 307 186472053 - Bphy_3187 - LysR family transcriptional regulator 81 58.99 0 98076..99416 + 446 186472054 - Bphy_3188 - xenobiotic compound monooxygenase A subunit 82 56.84 -1 99416..99934 + 172 186472055 - Bphy_3189 - flavin reductase domain-containing protein 83 56.52 -1 100032..100238 + 68 186472056 - Bphy_3190 - hypothetical protein 84 56.69 -1 100235..101707 + 490 186472057 - Bphy_3191 - Na+/solute symporter 85 58.24 -1 103536..104627 + 363 186472058 - Bphy_3194 - ISRSO5-transposase protein 86 54.19 -2 104657..105730 - 357 186472059 - Bphy_3195 - methyl-accepting chemotaxis sensory transducer 87 53.78 -2 105992..107077 - 361 186472060 - Bphy_3196 - outer membrane protein (porin) 88 56.14 -1 107221..108864 - 547 186472061 - Bphy_3197 - glucose-methanol-choline oxidoreductase 89 56.85 -1 108869..110365 - 498 186472062 - Bphy_3198 - aldehyde dehydrogenase 90 54.85 -2 110411..111595 - 394 186472063 - Bphy_3199 - membrane protein involved in aromatic hydrocarbon degradation 91 55.76 -1 111656..112618 - 320 186472064 - Bphy_3200 - ferredoxin 92 58.73 -1 112803..114113 - 436 186472065 - Bphy_3201 - phthalate 4,5-dioxygenase 93 56.59 -1 114317..115318 + 333 186472066 - Bphy_3202 - LysR family transcriptional regulator 94 55.06 -1 115395..116342 - 315 186472067 - Bphy_3203 - oxidoreductase domain-containing protein 95 56.82 -1 116339..117181 - 280 186472068 - Bphy_3204 - protocatechuate 4,5-dioxygenase 96 54.17 -2 117174..117581 - 135 186472069 - Bphy_3205 - protocatechuate 4,5-dioxygenase, alpha subunit 97 57.87 -1 117581..118489 - 302 186472070 - Bphy_3206 - amidohydrolase 2 98 59.01 0 118564..119268 - 234 186472071 - Bphy_3207 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 99 53.26 -2 119273..120301 - 342 186472072 - Bphy_3208 - amidohydrolase 2 100 59.28 0 120298..121407 - 369 186472073 - Bphy_3209 - hypothetical protein 62.69 MEAN 3.82 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.