IslandPath Analysis: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 37.86   STD DEV: 3.35
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293, complete genome - 1..2038396
1970 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 38.75	0	116..1462	+	448	116617175	-	LEUM_0001	-	chromosomal replication initiator protein DnaA
2	 37.99	0	1675..2811	+	378	116617176	-	LEUM_0002	-	DNA polymerase III, beta subunit
3	 41.16	0	3004..3450	+	148	116617177	-	LEUM_0003	-	S4-like RNA binding protein
4	 39.82	0	3432..4556	+	374	116617178	-	LEUM_0004	-	DNA replication and repair protein RecF
5	 40.52	0	4618..6636	+	672	116617179	-	LEUM_0005	-	DNA gyrase subunit B
6	 41.03	0	6711..9257	+	848	116617180	-	LEUM_0006	-	DNA gyrase subunit A
7	 35.23	0	9403..9876	+	157	116617181	-	LEUM_0007	-	glutathione peroxidase
8	 35.01	0	9901..10614	-	237	116617182	-	LEUM_0008	-	response regulator
9	 34.77	0	10568..11401	-	277	116617183	-	LEUM_0009	-	signal transduction protein
10	 37.39	0	11667..13292	+	541	116617184	-	LEUM_0010	-	glycosyltransferase
11	 36.86	0	13289..14761	+	490	116617185	-	LEUM_0011	-	glycosyltransferase
12	 35.82	0	14838..16286	+	482	116617186	-	LEUM_0012	-	hypothetical protein
13	 39.45	0	16314..17834	+	506	116617187	-	LEUM_0013	-	hypothetical protein
14	 39.60	0	17834..18871	+	345	116617188	-	LEUM_0014	-	hypothetical protein
15	 33.60	-1	18916..19290	-	124	116617189	-	LEUM_0015	-	aromatic compounds catabolism protein
16	 42.09	+1	19326..20159	+	277	116617190	-	LEUM_0016	-	naphthoate synthase
17	 38.62	0	20180..20974	+	264	116617191	-	LEUM_0017	-	amidohydrolase
18	 39.58	0	20987..22171	+	394	116617192	-	LEUM_0018	-	transaminase
19	 36.73	0	29609..30814	+	401	116617193	-	LEUM_0038	-	major facilitator superfamily permease
20	 37.07	0	30860..31636	-	258	116617194	-	LEUM_0039	-	HAD family sugar phosphatase
21	 41.67	+1	31872..32315	+	147	116617195	-	LEUM_0040	-	hypothetical protein
22	 39.77	0	32315..33106	+	263	116617196	-	LEUM_0041	-	hypothetical protein
23	 39.68	0	33142..33582	-	146	116617197	-	LEUM_0042	-	acetyltransferase
24	 35.61	0	33684..35882	+	732	116617198	-	LEUM_0043	-	phosphoglycerol transferase/alkaline phosphatase superfamily protein
25	 40.21	0	35936..36997	+	353	116617199	-	LEUM_0044	-	glycosyltransferase
26	 40.82	0	37065..37505	+	146	116617200	-	LEUM_0045	-	MerR family transcriptional regulator
27	 41.39	+1	37588..38481	+	297	116617201	-	LEUM_0046	-	pseudouridylate synthase, 23S RNA-specific
28	 40.50	0	38555..39307	-	250	116617202	-	LEUM_0047	-	glycerol uptake facilitator related permease
29	 40.16	0	39400..41451	-	683	116617203	-	LEUM_0048	-	cation transport ATPase
30	 39.91	0	41448..41873	-	141	116617204	-	LEUM_0049	-	transcriptional regulator
31	 37.16	0	42075..42440	+	121	116617205	-	LEUM_0050	-	GntR family transcriptional regulator
32	 35.54	0	42437..43342	+	301	116617206	-	LEUM_0051	-	ABC-type multidrug transport system, ATPase component
33	 40.92	0	43501..44172	+	223	116617207	-	LEUM_0052	-	hypothetical protein
34	 38.96	0	44198..45103	+	301	116617208	-	LEUM_0053	-	ABC-type multidrug transport system, ATPase component
35	 34.11	-1	45107..45874	+	255	116617209	-	LEUM_0054	-	ABC-type transport system for multi-copper enzyme maturation, permease component
36	 40.30	0	45926..46786	-	286	116617210	-	LEUM_0055	-	aldo/keto reductase
37	 39.05	0	47279..48397	-	372	116617211	-	LEUM_0057	-	acetylornithine aminotransferase
38	 38.23	0	48408..49142	-	244	116617212	-	LEUM_0058	-	acetylglutamate kinase
39	 39.92	0	49186..50400	-	404	116617213	-	LEUM_0059	-	glutamate N-acetyltransferase / N-acetylglutamate synthase
40	 39.00	0	50445..51485	-	346	116617214	argC	LEUM_0060	-	N-acetyl-gamma-glutamyl-phosphate reductase
41	 41.03	0	51610..52116	-	168	116617215	-	LEUM_0061	-	phospholipid-binding protein
42	 38.06	0	52119..52499	-	126	116617216	-	LEUM_0062	-	hypothetical protein
43	 34.68	0	52610..52906	+	98	116617217	-	LEUM_0063	-	hypothetical protein
44	 40.84	0	52927..53592	-	221	116617218	-	LEUM_0064	-	K+ transport systems, NAD-binding component
45	 40.38	0	53624..55027	-	467	116617219	-	LEUM_0065	-	Trk-type K+ transport systems, membrane component
46	 36.57	0	55344..56549	+	401	116617220	-	LEUM_0066	-	major facilitator superfamily permease
47	 33.89	-1	56606..57328	-	240	116617221	-	LEUM_0067	-	hypothetical protein
48	 34.85	0	57501..57764	+	87	116617222	-	LEUM_0068	-	XRE family transcriptional regulator
49	 40.35	0	57869..58039	+	56	116617223	-	LEUM_0069	-	hypothetical protein
50	 39.90	0	58211..58408	+	65	116617224	-	LEUM_0070	-	hypothetical protein
51	 31.30	-1	59113..59358	+	81	116617225	-	LEUM_0071	-	hypothetical protein
52	 36.75	0	59397..59777	+	126	116617226	-	LEUM_0072	-	metal-dependent membrane protease
53	 39.63	0	59955..61511	+	518	116617227	-	LEUM_0073	-	ABC-type uncharacterized transport systems, ATPase component
54	 40.55	0	61511..62632	+	373	116617228	-	LEUM_0074	-	ABC-type uncharacterized transport system, permease component
55	 42.74	+1	62634..63590	+	318	116617229	-	LEUM_0075	-	ABC transporter permease
56	 40.00	0	63630..64544	-	304	116617230	-	LEUM_0076	-	malate dehydrogenase (NAD)
57	 39.15	0	64660..65415	-	251	116617231	-	LEUM_0077	-	ABC-type uncharacterized transport system, ATPase component
58	 39.33	0	65408..66307	-	299	116617232	-	LEUM_0078	-	ribose/xylose/arabinose/galactoside ABC-type transporter permease
59	 41.09	0	66304..67308	-	334	116617233	-	LEUM_0079	-	ABC-type uncharacterized transport system, periplasmic component
60	 34.86	0	67775..68362	+	195	116617234	-	LEUM_0080	-	XRE family transcriptional regulator
61	 36.31	0	68420..69157	+	245	116617235	-	LEUM_0081	-	Short-chain alcohol dehydrogenase
62	 34.92	0	69273..69398	+	41	116617236	-	LEUM_0082	-	hypothetical protein
63	 32.67	-1	70221..71570	-	449	116617237	-	LEUM_0083	-	lactococcin A ABC transporter permease protein
64	 36.08	0	71588..73735	-	715	116617238	-	LEUM_0084	-	bacteriocin-processing peptidase
65	 37.85	0	73966..74142	+	58	116617239	-	LEUM_0085	-	hypothetical protein
66	 43.21	+1	74173..74334	+	53	116617240	-	LEUM_0086	-	hypothetical protein
67	 29.08	-2	74331..74636	+	101	116617241	-	LEUM_0087	-	hypothetical protein
68	 28.99	-2	74793..74930	+	45	116617242	-	LEUM_0088	-	hypothetical protein
69	 41.11	0	74945..75124	+	59	116617243	-	LEUM_0089	-	hypothetical protein
70	 39.55	0	75286..75462	+	58	116617244	-	LEUM_0090	-	hypothetical protein
71	 38.01	0	75747..75917	+	56	116617245	-	LEUM_0091	-	hypothetical protein
72	 30.52	-2	75923..76135	+	70	116617246	-	LEUM_0092	-	hypothetical protein
73	 33.20	-1	76407..77132	-	241	116617247	-	LEUM_0093	-	response regulator
74	 32.11	-1	77138..78448	-	436	116617248	-	LEUM_0094	-	signal transduction protein
75	 32.50	-1	78626..78745	+	39	116617249	-	LEUM_0095	-	hypothetical protein
76	 38.81	0	78901..79704	+	267	116617250	-	LEUM_0096	-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
77	 35.45	0	79688..80254	+	188	116617251	-	LEUM_0097	-	hypothetical protein
78	 41.63	+1	80451..81848	+	465	116617252	-	LEUM_0098	-	fumarate reductase, flavoprotein subunit
79	 35.24	0	82029..82919	+	296	116617253	-	LEUM_0099	-	XRE-family DNA-binding domain-containing protein
80	 35.39	0	82926..83654	+	242	116617254	-	LEUM_0100	-	hypothetical protein
81	 40.51	0	83851..85953	+	700	116617255	-	LEUM_0101	-	glycosyltransferase
82	 36.22	0	85974..86978	+	334	116617256	-	LEUM_0102	-	glycosyltransferase-like protein
83	 30.64	-2	87061..87543	+	160	116617257	-	LEUM_0103	-	GtcA family membrane protein
84	 41.58	+1	87724..89094	+	456	116617258	-	LEUM_0104	-	NAD(FAD)-dependent dehydrogenase
85	 37.04	0	89182..89721	-	179	116617259	-	LEUM_0105	-	periplasmic/secreted protein
86	 39.15	0	90826..91908	+	360	116617260	-	LEUM_0107	-	glutathione S-transferase
87	 38.58	0	91883..93217	+	444	116617261	-	LEUM_0108	-	propionate catabolism protein
88	 34.23	-1	93239..93796	+	185	116617262	-	LEUM_0109	-	acetyltransferase
89	 35.28	0	93811..94479	+	222	116617263	-	LEUM_0110	-	ABC-type amino acid transport system, permease component
90	 36.52	0	94494..95246	+	250	116617264	-	LEUM_0111	-	ABC-type polar amino acid transport system, ATPase component
91	 36.52	0	95281..96096	+	271	116617265	-	LEUM_0112	-	ABC-type amino acid transport system, periplasmic component
92	 40.45	0	96122..97288	+	388	116617266	-	LEUM_0113	-	metal-dependent amidase/aminoacylase/carboxypeptidase
93	 37.78	0	97303..97617	+	104	116617267	-	LEUM_0114	-	thioredoxin
94	 38.42	0	98013..98759	+	248	116617268	-	LEUM_0115	-	metal-dependent hydrolase
95	 36.86	0	98761..100092	+	443	116617269	-	LEUM_0116	-	amino acid transporter
96	 39.12	0	100143..100919	+	258	116617270	-	LEUM_0117	-	acetoin reductase
97	 36.00	0	100967..101830	+	287	116617271	-	LEUM_0118	-	ABC-type metal ion transport system, periplasmic component/surface antigen
98	 36.07	0	101869..102525	+	218	116617272	-	LEUM_0119	-	ABC-type amino acid transport system, permease component
99	 33.48	-1	102506..103186	+	226	116617273	-	LEUM_0120	-	ABC-type amino acid transport system, permease component
100	 36.03	0	103179..103919	+	246	116617274	-	LEUM_0121	-	ABC-type polar amino acid transport system, ATPase component
37.86	MEAN

3.35	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.