version 1.0
Chlorobaculum parvum NCIB 8327, complete genome - 1..2289249 2043 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 54.12 0 167..1648 + 493 193211677 - Cpar_0001 - chromosomal replication initiator protein DnaA 2 51.29 0 1934..3058 + 374 193211678 - Cpar_0002 - DNA polymerase III, beta subunit 3 45.80 -1 3074..4180 + 368 193211679 - Cpar_0003 - DNA replication and repair protein RecF 4 42.18 -2 4183..4476 + 97 193211680 - Cpar_0004 - hypothetical protein 5 48.74 -1 4603..5829 - 408 193211681 - Cpar_0005 - beta-lactamase domain protein 6 51.13 0 5905..8298 - 797 193211682 - Cpar_0006 - DNA polymerase B region 7 54.88 0 8350..10215 - 621 193211683 - Cpar_0007 - glucose inhibited division protein A 8 48.87 -1 10583..11026 - 147 193211684 - Cpar_0008 - protein tyrosine phosphatase 9 55.36 0 11807..12151 + 114 193211685 - Cpar_0009 - cytochrome c class I 10 57.73 0 12167..13453 + 428 193211686 - Cpar_0010 - Flavocytochrome c sulphide dehydrogenase flavin-binding 11 55.83 0 13665..15464 + 599 193211687 - Cpar_0011 - protein-export membrane protein SecD 12 54.80 0 15483..16409 + 308 193211688 - Cpar_0012 - protein-export membrane protein SecF 13 55.45 0 16654..17973 + 439 193211689 - Cpar_0013 - PpiC-type peptidyl-prolyl cis-trans isomerase 14 58.59 0 17962..19905 - 647 193211690 - Cpar_0014 - DNA gyrase, B subunit 15 59.49 0 19980..20369 - 129 193211691 - Cpar_0015 - protein of unknown function UPF0102 16 60.84 0 20380..20997 - 205 193211692 - Cpar_0016 - Ribonuclease H 17 59.30 0 21280..22962 + 560 193211693 - Cpar_0017 - ribonuclease, Rne/Rng family 18 61.38 0 22988..23857 + 289 193211694 - Cpar_0018 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 19 59.04 0 23854..25596 + 580 193211695 - Cpar_0019 - carboxyl-terminal protease 20 56.80 0 25626..26324 - 232 193211696 - Cpar_0020 - hypothetical protein 21 59.38 0 26324..27475 - 383 193211697 - Cpar_0021 - geranylgeranyl reductase 22 60.34 0 27496..28965 - 489 193211698 - Cpar_0022 - glycyl-tRNA synthetase 23 46.99 -1 29103..29915 - 270 193211699 - Cpar_0023 - hypothetical protein 24 59.19 0 30605..31072 + 155 193211700 - Cpar_0025 - Rhodanese domain protein 25 63.94 +1 31122..32480 + 452 193211701 - Cpar_0026 - cobyrinic acid a,c-diamide synthase 26 55.95 0 32810..33145 + 111 193211702 - Cpar_0027 - sulfur relay protein, TusE/DsrC/DsvC family 27 59.75 0 33218..34474 + 418 193211703 - Cpar_0028 - sulfite reductase, dissimilatory-type alpha subunit 28 61.94 +1 34583..35662 + 359 193211704 - Cpar_0029 - sulfite reductase, dissimilatory-type beta subunit 29 61.20 0 35871..37607 + 578 193211705 - Cpar_0030 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 30 58.68 0 37653..38015 + 120 193211706 - Cpar_0031 - hypothetical protein 31 58.73 0 38241..38681 + 146 193211707 - Cpar_0032 - hypothetical protein 32 58.43 0 38678..39673 + 331 193211708 - Cpar_0033 - Nitrate reductase gamma subunit 33 58.59 0 39678..41324 + 548 193211709 - Cpar_0034 - DsrK protein 34 60.28 0 41317..41739 + 140 193211710 - Cpar_0035 - cytochrome DsrJ 35 62.84 +1 41736..42518 + 260 193211711 - Cpar_0036 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 36 62.16 +1 42528..43682 + 384 193211712 - Cpar_0037 - Polysulphide reductase NrfD 37 56.49 0 43836..44297 + 153 193211713 - Cpar_0038 - siroheme synthase 38 60.87 0 44314..45693 + 459 193211714 - Cpar_0039 - uroporphyrin-III C-methyltransferase 39 55.27 0 45975..46676 + 233 193211715 - Cpar_0040 - phosphoribulokinase/uridine kinase 40 47.94 -1 46916..47620 + 234 193211716 - Cpar_0041 - putative PAS/PAC sensor protein 41 55.65 0 47934..48269 - 111 193211717 - Cpar_0042 - ATP-dependent Clp protease adaptor protein ClpS 42 59.61 0 48309..49271 - 320 193211718 - Cpar_0043 - Muramoyltetrapeptide carboxypeptidase 43 53.79 0 49326..49589 - 87 193211719 - Cpar_0044 - H+transporting two-sector ATPase delta/epsilon subunit 44 56.23 0 49596..50984 - 462 193211720 - Cpar_0045 - ATP synthase F1, beta subunit 45 55.43 0 51369..51911 + 180 193211721 - Cpar_0046 - Redoxin domain protein 46 60.77 0 52062..53927 + 621 193211722 - Cpar_0047 - Phosphoenolpyruvate carboxykinase (GTP) 47 59.38 0 54427..55839 + 470 193211723 - Cpar_0048 - membrane protein involved in aromatic hydrocarbon degradation 48 51.64 0 55955..56167 - 70 193211724 - Cpar_0049 - protein of unknown function DUF1458 49 58.41 0 56543..57499 + 318 193211725 - Cpar_0050 - protein of unknown function DUF81 50 57.59 0 57496..57969 + 157 193211726 - Cpar_0051 - hypothetical protein 51 60.17 0 58553..59875 + 440 193211727 - Cpar_0052 - major facilitator superfamily MFS_1 52 60.14 0 60012..60455 + 147 193211728 - Cpar_0053 - methionine-R-sulfoxide reductase 53 59.24 0 60681..62282 - 533 193211729 - Cpar_0054 - drug resistance transporter, EmrB/QacA subfamily 54 61.53 0 62282..63274 - 330 193211730 - Cpar_0055 - secretion protein HlyD family protein 55 59.83 0 63281..63763 - 160 193211731 - Cpar_0056 - UspA domain protein 56 62.36 +1 63760..65106 - 448 193211732 - Cpar_0057 - outer membrane efflux protein 57 63.20 +1 65447..67552 + 701 193211733 - Cpar_0058 - transcriptional regulator, NifA subfamily, Fis Family 58 56.53 0 67653..68471 + 272 193211734 - Cpar_0059 - hypothetical protein 59 56.72 0 68547..69752 - 401 193211735 - Cpar_0060 - arsenite-activated ATPase ArsA 60 57.89 0 70214..71671 + 485 193211736 - Cpar_0061 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 61 54.09 0 71844..72002 + 52 193211737 - Cpar_0062 - hypothetical protein 62 52.87 0 72211..72855 + 214 193211738 - Cpar_0063 - hypothetical protein 63 58.52 0 72852..73256 + 134 193211739 - Cpar_0064 - hypothetical protein 64 63.23 +1 73296..74312 - 338 193211740 - Cpar_0065 - Alpha/beta hydrolase fold-3 domain protein 65 62.81 +1 74326..74844 - 172 193211741 - Cpar_0066 - nitroreductase 66 59.11 0 74841..75872 - 343 193211742 - Cpar_0067 - TrkA-N domain protein 67 56.21 0 75909..76520 - 203 193211743 - Cpar_0068 - hypothetical protein 68 62.10 +1 76713..77786 - 357 193211744 - Cpar_0069 - peptide chain release factor 1 69 54.92 0 77809..79170 - 453 193211745 - Cpar_0070 - membrane-associated zinc metalloprotease 70 61.50 0 79337..80497 - 386 193211746 - Cpar_0071 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 71 59.50 0 80900..81178 - 92 193211747 - Cpar_0072 - acylphosphatase 72 57.34 0 81184..83295 - 703 193211748 - Cpar_0073 - ATP-dependent metalloprotease FtsH 73 59.64 0 83606..84430 + 274 193211749 - Cpar_0074 - orotidine 5'-phosphate decarboxylase 74 59.57 0 84522..86366 + 614 193211750 - Cpar_0075 - glucosamine/fructose-6-phosphate aminotransferase, isomerizing 75 50.91 0 88617..89276 - 219 193211751 - Cpar_0076 - CRISPR-associated protein Cas1 76 56.65 0 89396..89974 + 192 193211752 - Cpar_0077 - hypothetical protein 77 52.46 0 90205..92598 + 797 193211753 - Cpar_0078 - CRISPR-associated protein, Csm1 family 78 38.82 -2 92598..93071 + 157 193211754 - Cpar_0079 - CRISPR-associated protein, Csm2 family 79 47.93 -1 93087..93956 + 289 193211755 - Cpar_0080 - CRISPR-associated RAMP protein, Csm3 family 80 50.95 0 93970..95070 + 366 193211756 - Cpar_0081 - CRISPR-associated RAMP protein, Csm4 family 81 36.51 -2 95072..95386 + 104 193211757 - Cpar_0082 - CRISPR-associated RAMP protein, Csm5 family 82 41.57 -2 95428..96921 + 497 193211758 - Cpar_0083 - CRISPR-associated RAMP protein, Csm5 family 83 39.32 -2 96918..98453 + 511 193211759 - Cpar_0084 - hypothetical protein 84 53.54 0 98480..99271 + 263 193211760 - Cpar_0085 - CRISPR-associated protein Cas6 85 56.05 0 99650..100591 + 313 193211761 - Cpar_0086 - domain of unknown function DUF1731 86 52.38 0 100673..100945 - 90 193211762 - Cpar_0087 - RNP-1 like RNA-binding protein 87 57.32 0 101356..102693 + 445 193211763 - Cpar_0088 - ammonium transporter 88 54.97 0 102705..103046 + 113 193211764 - Cpar_0089 - nitrogen regulatory protein P-II 89 57.47 0 103165..103686 - 173 193211765 - Cpar_0090 - Tetratricopeptide TPR_2 repeat protein 90 56.65 0 104118..104846 + 242 193211766 - Cpar_0091 - chromosome segregation and condensation protein ScpA 91 62.23 +1 104867..106150 + 427 193211767 - Cpar_0092 - hypothetical protein 92 62.39 +1 106147..106590 + 147 193211768 - Cpar_0093 - protein of unknown function UPF0079 93 63.13 +1 106600..107277 + 225 193211769 - Cpar_0094 - peptidase M22 glycoprotease 94 53.65 0 107466..107903 + 145 193211770 - Cpar_0095 - iojap-like protein 95 58.52 0 108004..110484 + 826 193211771 - Cpar_0096 - DNA gyrase, A subunit 96 56.48 0 110595..112292 + 565 193211772 - Cpar_0097 - CTP synthase 97 51.41 0 118364..118894 + 176 193211773 - Cpar_0098 - hypothetical protein 98 55.76 0 119185..120330 + 381 193211774 - Cpar_0099 - hypothetical protein 99 59.63 0 120480..122468 + 662 193211775 - Cpar_0100 - protein of unknown function DUF224 cysteine-rich region domain protein 100 59.54 0 122496..123674 + 392 193211776 - Cpar_0101 - peptidase M24 56.24 MEAN 5.58 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.