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IslandPath Analysis: Streptococcus pyogenes MGAS10394

Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).

A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.65 STD DEV: 3.80

Streptococcus pyogenes MGAS10394, complete genome - 1..1899877
1886 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 33.26	-1	202..1557	+	451	50913347	dnaA	M6_Spy0001	-	chromosomal replication initiation protein
2	 33.42	-1	1712..2848	+	378	50913348	-	M6_Spy0002	-	DNA polymerase III subunit beta
3	 31.82	-1	2923..3120	+	65	50913349	-	M6_Spy0003	-	putative cytoplasmic protein
4	 37.28	0	3450..4565	+	371	50913350	-	M6_Spy0004	-	translation-associated GTPase
5	 32.20	-1	4590..5204	+	204	50913351	-	M6_Spy0005	-	peptidyl-tRNA hydrolase
6	 35.36	0	5207..8710	+	1167	50913352	-	M6_Spy0006	-	transcription-repair coupling factor
7	 31.31	-1	8848..9144	+	98	50913353	-	M6_Spy0007	-	heat shock protein 15
8	 26.61	-2	9131..9502	+	123	50913354	-	M6_Spy0008	-	DivIC
9	 26.19	-2	9499..9624	+	41	50913355	-	M6_Spy0009	-	hypothetical protein
10	 31.39	-1	9637..10923	+	428	50913356	-	M6_Spy0010	-	Beta-lactamase
11	 28.59	-2	10920..12206	+	428	50913357	-	M6_Spy0011	-	tRNA(Ile)-lysidine synthetase
12	 30.02	-2	12211..12753	+	180	50913358	-	M6_Spy0012	-	hypoxanthine-guanine phosphoribosyltransferase
13	 37.78	0	12775..14754	+	659	50913359	-	M6_Spy0013	-	cell division protein ftsH
14	 42.56	+1	14950..15957	-	335	50913360	-	M6_Spy0014	-	transposase
15	 32.58	-1	16098..17558	+	486	50913361	-	M6_Spy0015	-	amino acid permease
16	 36.30	0	17900..18034	-	44	50913362	-	M6_Spy0016	-	hypothetical protein
17	 40.69	0	32114..33310	+	398	50913363	-	M6_Spy0017	-	hypothetical protein
18	 38.97	0	33551..34525	+	324	50913364	-	M6_Spy0018	-	ribose-phosphate pyrophosphokinase
19	 30.95	-2	34711..35466	+	251	50913365	recO	M6_Spy0019	-	DNA repair protein RecO
20	 37.19	0	35599..36687	-	362	50913366	-	M6_Spy0020	-	DNA integration/recombination/invertion protein
21	 37.68	0	36863..37414	-	183	50913367	-	M6_Spy0021	-	unknown phage protein
22	 35.68	0	37425..37808	-	127	50913368	-	M6_Spy0022	-	unknown phage protein
23	 39.03	0	37822..38172	-	116	50913369	-	M6_Spy0023	-	Cro/CI family phage transcriptional regulator
24	 32.81	-1	38811..39002	+	63	50913370	-	M6_Spy0024	-	unknown phage protein
25	 39.30	0	39053..39253	+	66	50913371	-	M6_Spy0025	-	unknown phage protein
26	 35.27	0	39341..39598	+	85	50913372	-	M6_Spy0026	-	unknown phage protein
27	 36.02	0	39778..39963	+	61	50913373	-	M6_Spy0027	-	unknown phage protein
28	 37.24	0	39994..40377	+	127	50913374	-	M6_Spy0028	-	unknown phage protein
29	 37.91	0	40374..40526	+	50	50913375	-	M6_Spy0029	-	unknown phage protein
30	 42.16	0	40523..40726	+	67	50913376	-	M6_Spy0030	-	unknown phage protein
31	 40.67	0	40814..41113	+	99	50913377	-	M6_Spy0031	-	unknown phage protein
32	 42.06	0	41113..42270	+	385	50913378	-	M6_Spy0032	-	unknown phage protein
33	 41.37	0	42263..42847	+	194	50913379	-	M6_Spy0033	-	unknown phage protein
34	 45.19	+1	42890..44812	+	640	50913380	-	M6_Spy0034	-	phage-related DNA polymerase
35	 43.40	+1	44817..47201	+	794	50913381	-	M6_Spy0035	-	virulence-associated protein E
36	 40.82	0	47549..47842	+	97	50913382	-	M6_Spy0036	-	hypothetical protein
37	 41.19	0	47839..49161	+	440	50913383	-	M6_Spy0037	-	Phage-related DNA helicase
38	 37.43	0	49162..49332	+	56	50913384	-	M6_Spy0038	-	unknown phage protein
39	 38.46	0	49325..49597	+	90	50913385	-	M6_Spy0039	-	unknown phage protein
40	 36.69	0	49730..50146	+	138	50913386	-	M6_Spy0040	-	Phage transcriptional activator
41	 41.41	0	50194..50688	+	164	50913387	-	M6_Spy0041	-	Phage terminase small subunit
42	 36.36	0	50669..51955	+	428	50913388	-	M6_Spy0042	-	terminase large subunit
43	 37.18	0	51971..53503	+	510	50913389	-	M6_Spy0043	-	portal protein
44	 35.81	0	53460..54911	+	483	50913390	-	M6_Spy0044	-	unknown phage protein
45	 34.39	-1	54939..55127	+	62	50913391	-	M6_Spy0045	-	unknown phage protein
46	 37.83	0	55132..55398	+	88	50913392	-	M6_Spy0046	-	unknown phage protein
47	 41.75	0	55566..56135	+	189	50913393	-	M6_Spy0047	-	Phage scaffold protein
48	 39.86	0	56148..57035	+	295	50913394	-	M6_Spy0048	-	unknown phage protein
49	 37.82	0	57047..57403	+	118	50913395	-	M6_Spy0049	-	unknown phage protein
50	 35.84	0	57414..57692	+	92	50913396	-	M6_Spy0050	-	unknown phage protein
51	 41.59	0	57707..58033	+	108	50913397	-	M6_Spy0051	-	unknown phage protein
52	 33.89	-1	58037..58396	+	119	50913398	-	M6_Spy0052	-	unknown phage protein
53	 39.83	0	58408..59007	+	199	50913399	-	M6_Spy0053	-	unknown phage protein
54	 36.84	0	59061..59516	+	151	50913400	-	M6_Spy0054	-	unknown phage protein
55	 37.61	0	59591..59824	+	77	50913401	-	M6_Spy0055	-	unknown phage protein
56	 43.30	+1	59839..64221	+	1460	50913402	-	M6_Spy0056	-	unknown phage protein
57	 37.96	0	64233..65075	+	280	50913403	-	M6_Spy0057	-	unknown phage protein
58	 41.01	0	65085..67064	+	659	50913404	-	M6_Spy0058	-	Phage endopeptidase
59	 38.39	0	67061..68068	+	335	50913405	-	M6_Spy0059	-	hyaluronoglucosaminidase
60	 43.97	+1	68078..69985	+	635	50913406	-	M6_Spy0060	-	Phage infection protein
61	 37.21	0	69997..70434	+	145	50913407	-	M6_Spy0061	-	unknown phage protein
62	 42.72	+1	70431..71048	+	205	50913408	-	M6_Spy0062	-	unknown phage protein
63	 37.73	0	71058..71330	+	90	50913409	-	M6_Spy0063	-	unknown phage protein
64	 39.47	0	71327..71554	+	75	50913410	-	M6_Spy0064	-	holin
65	 43.97	+1	71670..72872	+	400	50913411	-	M6_Spy0065	-	Phage-associated cell wall hydrolase
66	 33.65	-1	73086..73709	+	207	50913412	-	M6_Spy0066	-	unknown phage protein
67	 35.87	0	73823..74809	-	328	50913413	-	M6_Spy0067	-	Sdn
68	 41.53	0	75042..75224	+	60	50913414	-	M6_Spy0068	-	unknown phage protein
69	 37.90	0	75463..76470	+	335	161761329	-	M6_Spy0069	-	putative glycerol-3-phosphate acyltransferase PlsX
70	 30.45	-2	76463..76705	+	80	50913416	-	M6_Spy0070	-	acyl carrier protein
71	 35.78	0	76827..77561	+	244	50913417	-	M6_Spy0071	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
72	 44.81	+1	77637..81410	+	1257	50913418	-	M6_Spy0072	-	phosphoribosylformylglycinamidine synthase
73	 38.76	0	81644..83098	+	484	50913419	-	M6_Spy0073	-	amidophosphoribosyltransferase
74	 42.62	+1	83126..84148	+	340	50913420	-	M6_Spy0074	-	phosphoribosylaminoimidazole synthetase
75	 46.85	+2	84316..84870	+	184	50913421	purN	M6_Spy0075	-	phosphoribosylglycinamide formyltransferase
76	 47.16	+2	85054..86601	+	515	50913422	purH	M6_Spy0076	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
77	 39.73	0	86660..87784	-	374	50913423	-	M6_Spy0077	-	autolysin
78	 46.57	+2	87890..89302	+	470	50913424	-	M6_Spy0078	-	phosphoribosylamine--glycine ligase
79	 48.20	+2	89460..90071	+	203	50913425	-	M6_Spy0079	-	phosphoribosylaminoimidazole carboxylase catalytic subunit
80	 48.38	+2	90022..91131	+	369	50913426	-	M6_Spy0080	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
81	 28.78	-2	91152..92492	+	446	50913427	-	M6_Spy0081	-	putative cytoplasmic protein
82	 45.01	+1	92708..94000	+	430	50913428	-	M6_Spy0082	-	adenylosuccinate lyase
83	 29.39	-2	94131..95042	+	303	50913429	-	M6_Spy0083	-	transcriptional regulator
84	 39.50	0	95196..96266	+	356	50913430	ruvB	M6_Spy0084	-	Holliday junction DNA helicase B
85	 35.39	0	96404..96841	+	145	50913431	-	M6_Spy0085	-	protein tyrosine phosphatase
86	 35.82	0	96864..97265	+	133	50913432	-	M6_Spy0086	-	hypothetical protein
87	 36.60	0	97262..99037	+	591	50913433	-	M6_Spy0087	-	acyltransferase
88	 40.18	0	99346..101988	+	880	50913434	-	M6_Spy0088	-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase
89	 27.78	-2	101958..102065	-	35	50913435	-	M6_Spy0089	-	hypothetical protein
90	 42.08	0	102240..103256	+	338	50913436	-	M6_Spy0090	-	alcohol dehydrogenase
91	 41.24	0	103644..104933	+	429	50913437	-	M6_Spy0091	-	Na+ driven multidrug efflux pump
92	 40.13	0	105132..105440	+	102	50913438	rpsJ	M6_Spy0092	-	30S ribosomal protein S10
93	 41.79	0	105688..106314	+	208	50913439	rplC	M6_Spy0093	-	50S ribosomal protein L3
94	 42.63	+1	106338..106961	+	207	50913440	rplD	M6_Spy0094	-	50S ribosomal protein L4
95	 38.05	0	106961..107257	+	98	50913441	rplW	M6_Spy0095	-	50S ribosomal protein L23
96	 43.53	+1	107275..108108	+	277	50913442	rplB	M6_Spy0096	-	50S ribosomal protein L2
97	 39.78	0	108247..108525	+	92	161761328	rpsS	M6_Spy0097	-	30S ribosomal protein S19
98	 39.71	0	108541..108885	+	114	50913444	rplV	M6_Spy0098	-	50S ribosomal protein L22
99	 41.44	0	108898..109551	+	217	50913445	rpsC	M6_Spy0099	-	30S ribosomal protein S3
100	 43.24	+1	109555..109968	+	137	50913446	rplP	M6_Spy0100	-	50S ribosomal protein L16
38.65	MEAN

3.80	STD DEV

Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.