version 1.0
Photorhabdus luminescens subsp. laumondii TTO1, complete genome - 1..5688987 4683 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 44.20 0 234..1622 + 462 37524033 dnaA plu0001 - chromosomal replication initiation protein 2 45.59 0 1627..2727 + 366 37524034 dnaN plu0002 - DNA polymerase III subunit beta 3 47.34 0 2749..3840 + 363 37524035 recF plu0003 - recombination protein F 4 45.05 0 3860..6274 + 804 37524036 gyrB plu0004 - DNA gyrase subunit B 5 35.00 -1 6415..6894 + 159 37524037 - plu0005 - hypothetical protein 6 32.28 -1 8013..8768 - 251 37524038 - plu0006 - hypothetical protein 7 43.78 0 8935..10044 - 369 37524039 asd plu0007 - aspartate-semialdehyde dehydrogenase 8 40.09 0 10251..10472 - 73 37524040 ogrK plu0008 - Ogr protein 9 43.00 0 10549..11634 - 361 37524041 - plu0009 - hypothetical protein 10 43.66 0 11631..12095 - 154 37524042 - plu0010 - hypothetical protein 11 43.54 0 12098..14536 - 812 37524043 - plu0011 - hypothetical protein 12 50.00 +1 14517..14636 - 39 37524044 - plu0012 - hypothetical protein 13 49.37 +1 14651..14968 - 105 37524045 - plu0013 - hypothetical protein 14 46.71 0 14995..15510 - 171 37524046 - plu0014 - hypothetical protein 15 45.87 0 15521..16693 - 390 37524047 - plu0015 - hypothetical protein 16 33.82 -1 16908..17114 + 68 37524048 - plu0016 - hypothetical protein 17 41.67 0 17111..17662 + 183 37524049 - plu0017 - hypothetical protein 18 38.79 0 17678..18208 + 176 37524050 - plu0018 - hypothetical protein 19 40.87 0 18438..19034 - 198 37524051 - plu0019 - hypothetical protein 20 45.19 0 19034..19522 - 162 37524052 - plu0020 - hypothetical protein 21 42.29 0 19522..20649 - 375 37524053 - plu0021 - hypothetical protein 22 46.50 0 20646..21260 - 204 37524054 - plu0022 - hypothetical protein 23 44.24 0 21253..22251 - 332 37524055 - plu0023 - hypothetical protein 24 48.83 0 22256..22597 - 113 37524056 - plu0024 - hypothetical protein 25 43.06 0 22597..23439 - 280 37524057 - plu0025 - hypothetical protein 26 39.71 0 23936..24139 - 67 37524058 - plu0026 - hypothetical protein 27 38.25 0 24422..24604 - 60 37524059 - plu0027 - hypothetical protein 28 36.26 -1 24983..25597 + 204 37524060 - plu0028 - hypothetical protein 29 36.47 -1 25880..26452 - 190 37524061 hin plu0029 - DNA-invertase HIN 30 38.67 0 26386..26535 + 49 37524062 - plu0030 - hypothetical protein 31 40.06 0 26532..27542 + 336 37524063 - plu0031 - hypothetical protein 32 32.75 -1 27552..27893 + 113 37524064 - plu0032 - hypothetical protein 33 37.95 0 28312..28896 - 194 37524065 - plu0033 - hypothetical protein 34 38.92 0 28944..29999 - 351 37524066 - plu0034 - hypothetical protein 35 39.01 0 30414..30554 - 46 37524067 rpmJ plu0035 - 50S ribosomal protein L36 36 40.78 0 30574..30828 - 84 37524068 rpmE plu0036 - 50S ribosomal protein L31 37 43.01 0 30977..32806 - 609 37524069 glmS plu0037 - D-fructose-6-phosphate amidotransferase 38 41.78 0 32914..34287 - 457 37524070 glmU plu0038 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 39 45.39 0 34416..34838 - 140 37524071 atpC plu0039 - F0F1 ATP synthase subunit epsilon 40 47.22 0 34860..36242 - 460 37524072 atpD plu0040 - F0F1 ATP synthase subunit beta 41 47.69 0 36277..37140 - 287 37524073 atpG plu0041 - F0F1 ATP synthase subunit gamma 42 46.24 0 37199..38740 - 513 37524074 atpA plu0042 - F0F1 ATP synthase subunit alpha 43 44.19 0 38755..39288 - 177 37524075 atpH plu0043 - F0F1 ATP synthase subunit delta 44 47.13 0 39301..39771 - 156 37524076 atpF plu0044 - F0F1 ATP synthase subunit B 45 50.83 +1 39830..40069 - 79 37524077 atpE plu0045 - F0F1 ATP synthase subunit C 46 42.91 0 40123..40947 - 274 37524078 atpB plu0046 - F0F1 ATP synthase subunit A 47 42.06 0 40978..41355 - 125 37524079 atpI plu0047 - F0F1 ATP synthase subunit I 48 41.38 0 41966..42586 - 206 37524080 gidB plu0048 - glucose-inhibited division protein B 49 43.07 0 42600..44489 - 629 37524081 gidA plu0049 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 50 43.99 0 44870..45310 - 146 37524082 mioC plu0050 - flavodoxin 51 39.83 0 45402..45863 - 153 37524083 asnC plu0051 - DNA-binding transcriptional regulator AsnC 52 43.81 0 46030..47022 + 330 37524084 asnA plu0052 - asparagine synthetase AsnA 53 38.89 0 47029..48486 - 485 37524085 yieM plu0053 - hypothetical protein 54 37.04 -1 48491..50002 - 503 37524086 - plu0054 - regulatory ATPase RavA 55 36.90 -1 50255..50674 + 139 37524087 rbsD plu0055 - D-ribose pyranase 56 39.71 0 50682..52187 + 501 37524088 rbsA plu0056 - D-ribose transporter ATP binding protein 57 39.40 0 52194..53165 + 323 37524089 rbsC plu0057 - ribose ABC transporter permease protein 58 41.53 0 53190..54080 + 296 37524090 rbsB plu0058 - D-ribose transporter subunit RbsB 59 41.83 0 54144..55073 + 309 37524091 rbsK plu0059 - ribokinase 60 40.12 0 55076..56077 + 333 37524092 rbsR plu0060 - transcriptional repressor RbsR 61 40.16 0 56074..57465 - 463 37524093 - plu0061 - hypothetical protein 62 57.10 +2 63666..63968 + 100 37524094 - plu0064 - hypothetical protein 63 62.20 +2 63962..64297 + 111 37524095 - plu0065 - hypothetical protein 64 30.73 -2 67419..68492 - 357 37524096 - plu0070 - hypothetical protein 65 25.19 -2 68492..69031 - 179 37524097 - plu0071 - hypothetical protein 66 41.82 0 69280..70929 - 549 37524098 actP plu0072 - acetate permease 67 38.78 0 70926..71237 - 103 37524099 - plu0073 - hypothetical protein 68 44.33 0 71302..73257 - 651 37524100 acs plu0074 - acetyl-CoA synthetase 69 43.38 0 73631..74257 + 208 37524101 sodA plu0075 - superoxide dismutase 70 42.71 0 74376..75047 + 223 37524102 - plu0076 - hypothetical protein 71 49.24 +1 75432..76022 + 196 37524103 - plu0077 - RNA polymerase sigma factor 72 46.27 0 76015..76215 + 66 37524104 - plu0078 - hypothetical protein 73 50.62 +1 76226..76705 - 159 37524105 - plu0079 - hypothetical protein 74 53.33 +1 76707..77456 - 249 37524106 - plu0080 - hypothetical protein 75 51.19 +1 77425..78348 - 307 37524107 - plu0081 - hypothetical protein 76 47.62 0 78376..78669 - 97 37524108 - plu0082 - hypothetical protein 77 36.49 -1 78885..79106 + 73 37524109 - plu0083 - hypothetical protein 78 45.18 0 79372..80409 - 345 37524110 trpS plu0084 - tryptophanyl-tRNA synthetase 79 44.26 0 80414..81118 - 234 37524111 gph plu0085 - phosphoglycolate phosphatase 80 44.20 0 81108..81788 - 226 37524112 rpe plu0086 - ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) 81 41.70 0 81849..82661 - 270 37524113 dam plu0087 - DNA adenine methylase 82 40.88 0 82746..83672 - 308 37524114 damX plu0088 - hypothetical protein 83 45.78 0 83965..85065 - 366 37524115 aroB plu0089 - 3-dehydroquinate synthase 84 46.74 0 85113..85634 - 173 37524116 aroK plu0090 - shikimate kinase I 85 40.68 0 86004..87038 - 344 37524117 - plu0091 - hypothetical protein 86 39.74 0 87031..87576 - 181 37524118 - plu0092 - hypothetical protein 87 39.46 0 87563..88117 - 184 37524119 - plu0093 - hypothetical protein 88 45.73 0 88117..88947 - 276 37524120 - plu0094 - hypothetical protein 89 46.42 0 89067..91595 + 842 37524121 mrcA plu0095 - peptidoglycan synthetase 90 43.35 0 91639..92187 - 182 37524122 nudE plu0096 - ADP-ribose diphosphatase NudE 91 39.76 0 92664..94796 + 710 37524123 - plu0097 - hypothetical protein 92 44.12 0 94864..95280 + 138 37524124 hslR plu0098 - heat shock protein 15 (HSP15) 93 42.84 0 95303..96175 + 290 37524125 hslO plu0099 - Hsp33-like chaperonin 94 45.56 0 96415..98034 + 539 37524126 pckA plu0100 - phosphoenolpyruvate carboxykinase 95 43.39 0 98082..98777 - 231 37524127 - plu0101 - hypothetical protein 96 35.46 -1 99468..100832 + 454 37524128 - plu0102 - hypothetical protein 97 34.29 -1 100832..101458 + 208 37524129 - plu0103 - hypothetical protein 98 39.19 0 101566..102060 + 164 37524130 - plu0104 - hypothetical protein 99 48.03 0 102764..106036 + 1090 37524131 pulA plu0105 - alpha-dextrin endo-1,6-alpha-glucosidase precursor (pullulanase precursor) 100 45.72 0 106391..107851 + 486 37524132 - plu0106 - hypothetical protein 43.10 MEAN 5.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.