version 1.0
Lactobacillus plantarum WCFS1, complete genome - 1..3308274 3007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 44.52 0 1..1368 + 455 28376975 dnaA lp_0001 - chromosomal replication initiation protein DnaA 2 42.54 0 1546..2685 + 379 28376976 dnaN lp_0002 - DNA-directed DNA polymerase III, beta chain 3 42.74 0 3210..3443 + 77 28376977 - lp_0004 - hypothetical protein 4 45.24 0 3444..4568 + 374 28376978 recF lp_0005 - recombination protein F 5 45.92 0 4565..6511 + 648 28376979 gyrB lp_0006 - DNA gyrase, B subunit 6 46.29 0 6676..9237 + 853 28376980 gyrA lp_0007 - DNA gyrase, A subunit 7 39.67 -1 9860..10159 + 99 28376981 rpsF lp_0009 - 30S ribosomal protein S6 8 41.96 0 10196..10798 + 200 28376982 ssb lp_0010 - single-strand binding protein 9 44.30 0 10837..11073 + 78 28376983 rpsR lp_0011 - 30S ribosomal protein S18 10 44.36 0 11254..13266 + 670 28376984 - lp_0012 - exopolyphosphatase-related protein (putative) 11 44.59 0 13279..13731 + 150 28376985 rplI lp_0013 - 50S ribosomal protein L9 12 47.72 0 13747..15171 + 474 28376986 dnaC lp_0014 - replicative DNA helicase DnaC 13 44.04 0 15393..16616 + 407 28376987 - lp_0015 - transport protein 14 43.62 0 16629..17435 + 268 28376988 proB lp_0016 - gamma-glutamyl kinase 15 48.91 0 17454..18692 + 412 28376989 proA lp_0017 - glutamate-5-semialdehyde dehydrogenase 16 44.84 0 19153..20769 + 538 28376990 - lp_0018 - lipoprotein precursor, peptide binding protein OppA-like protein 17 38.10 -1 20774..21025 - 83 28376991 - lp_0019 - hypothetical protein 18 47.72 0 21099..23003 + 634 28376992 glgB lp_0020 - glycogen branching enzyme 19 45.00 0 22993..24132 + 379 28376993 glgC lp_0021 - glucose-1-phosphate adenylyltransferase 20 46.72 0 24129..25301 + 390 28376994 glgD lp_0022 - glucose-1-phosphate adenylyltransferase, subunit 21 47.99 0 25294..26733 + 479 28376995 glgA lp_0023 - starch ( glycogen) synthase 22 47.98 0 26753..29149 + 798 28376996 glgP lp_0024 - glycogen phosphorylase 23 49.17 +1 29167..30984 + 605 28376997 amy1 lp_0025 - alpha-amylase 24 47.53 0 31317..32084 + 255 28376998 - lp_0026 - HAD superfamily hydrolase 25 48.81 0 32236..32907 - 223 28376999 pgmB1 lp_0027 - beta-phosphoglucomutase 26 46.82 0 32925..35645 - 906 28377000 map1 lp_0028 - maltose phosphorylase 27 47.11 0 36033..36482 - 149 28377001 - lp_0030 - hypothetical protein 28 40.80 -1 36680..36880 + 66 28377002 cspL lp_0031 - cold shock protein CspL 29 45.30 0 36963..37196 + 77 28377003 - lp_0032 - hypothetical protein 30 45.76 0 37770..38477 + 235 28377004 rrp1 lp_0036 - response regulator 31 43.20 0 38491..40365 + 624 28377005 hpk1 lp_0037 - histidine protein kinase; sensor protein 32 42.31 0 40346..41671 + 441 28377006 - lp_0038 - hypothetical protein 33 45.03 0 41683..42537 + 284 28377007 - lp_0039 - hypothetical protein 34 44.12 0 42895..43710 + 271 28377008 - lp_0041 - hydrolase 35 45.05 0 43821..45083 + 420 28377009 htrA lp_0043 - serine protease HtrA 36 43.33 0 45638..46117 + 159 28377010 - lp_0045 - SPOUT methyltransferase superfamily protein 37 33.85 -2 46600..47175 + 191 28377011 - lp_0046 - transcription regulator 38 41.23 0 47239..48669 + 476 28377012 aldH lp_0047 - aldehyde dehydrogenase 39 45.50 0 48877..49509 + 210 28377013 - lp_0048 - hypothetical protein 40 47.31 0 49758..50408 + 216 28377014 pnb lp_0050 - p-nitrobenzoate reductase 41 41.46 0 50524..50892 + 122 28377015 - lp_0052 - hypothetical protein 42 43.72 0 50960..51787 - 275 28377016 - lp_0053 - hypothetical protein 43 40.29 -1 51804..52637 - 277 28377017 - lp_0054 - hypothetical protein 44 45.91 0 52791..55160 - 789 28377018 - lp_0055 - fumarate reductase, flavoprotein subunit precursor 45 42.87 0 55625..57040 + 471 28377019 - lp_0056 - cation transport protein 46 47.35 0 57132..58037 + 301 28377020 - lp_0057 - transcription regulator 47 45.31 0 58107..58532 - 141 28377021 - lp_0058 - hypothetical protein 48 50.23 +1 58868..59293 + 141 28377022 arsC lp_0059 - arsenate reductase 49 46.69 0 59613..60473 + 286 28377023 - lp_0060 - short-chain dehydrogenase/oxidoreductase 50 46.34 0 60505..61350 + 281 28377024 - lp_0061 - acetoacetate decarboxylase (putative) 51 46.02 0 61378..62031 + 217 28377025 - lp_0062 - nitroreductase 52 45.96 0 62200..63735 + 511 28377026 - lp_0063 - hypothetical protein 53 46.40 0 63662..63883 - 73 28377027 - lp_0064 - hypothetical protein 54 44.94 0 64066..64737 + 223 28377028 pgmB2 lp_0066 - beta-phosphoglucomutase 55 47.10 0 64823..65839 - 338 28377029 bsh2 lp_0067 - choloylglycine hydrolase 56 45.68 0 66113..67456 + 447 28377030 - lp_0068 - integral membrane protein 57 45.92 0 67605..68351 + 248 28377031 ptp1 lp_0069 - protein-tyrosine phosphatase 58 47.04 0 68424..69671 - 415 28377032 - lp_0070 - 4-hydroxyphenylacetate-3-hydroxylase 59 44.74 0 69747..69860 - 37 28377033 - lp_0071 - hypothetical protein 60 45.51 0 69943..70443 - 166 28377034 - lp_0072 - hypothetical protein 61 49.33 +1 70536..71204 + 222 28377035 - lp_0073 - hypothetical protein 62 40.65 -1 71292..72248 - 318 28377036 - lp_0074 - hypothetical protein 63 42.75 0 72330..72977 + 215 28377037 - lp_0075 - acyl carrier protein phosphodiesterase (putative) 64 49.58 +1 73239..75257 + 672 28377038 fusA1 lp_0076 - elongation factor G 65 47.60 0 75275..75961 + 228 28377039 - lp_0077 - hypothetical protein 66 46.89 0 75967..76851 + 294 28377040 - lp_0078 - transport protein 67 46.34 0 77039..77530 + 163 28377041 - lp_0080 - acetyltransferase 68 47.85 0 77561..78235 - 224 28377042 - lp_0081 - intracellular protease/amidase (putative) 69 45.67 0 78281..79285 - 334 28377043 - lp_0082 - oxidoreductase 70 44.66 0 79467..79775 + 102 28377044 - lp_0083 - transcription regulator 71 45.39 0 79946..81280 - 444 28377045 - lp_0085 - cation efflux protein (putative) 72 47.91 0 82631..83515 + 294 28377046 pepI lp_0088 - prolyl aminopeptidase 73 45.78 0 83697..84443 - 248 28377047 - lp_0089 - hypothetical protein 74 39.77 -1 84613..85047 + 144 28377048 - lp_0091 - hypothetical protein 75 44.77 0 85149..86792 - 547 28377049 - lp_0092 - extracellular protein, peptide binding protein OppA-like protein 76 46.67 0 87460..88209 + 249 28377050 - lp_0096 - hypothetical protein 77 46.15 0 88467..89246 + 259 28377051 - lp_0098 - adenylyl transferase (putative) 78 39.32 -1 89314..89547 - 77 28377052 - lp_0099 - hypothetical protein 79 47.68 0 89568..90299 - 243 28377053 - lp_0100 - cobalt ABC transporter, ATP-binding protein (putative) 80 46.59 0 90301..91122 - 273 28377054 - lp_0101 - cobalt transport protein 81 50.86 +1 91097..92083 - 328 161501981 cbiM lp_0102 - cobalt transport protein CbiM 82 40.69 -1 92098..92763 - 221 28377056 - lp_0103 - transcription regulator 83 44.86 0 93016..94290 + 424 28377057 - lp_0104 - hypothetical protein 84 52.90 +1 94292..95032 + 246 28377058 - lp_0105 - NCAIR mutase, PurE-related protein 85 44.07 0 96329..97045 + 238 28377059 glpF1 lp_0108 - glycerol uptake facilitator protein 86 46.33 0 97070..97900 + 276 28377060 - lp_0109 - hypothetical protein 87 52.25 +1 98100..99077 - 325 28377061 - lp_0111 - oxidoreductase 88 49.12 +1 99433..100224 + 263 28377062 thiM lp_0113 - hydroxyethylthiazole kinase 89 51.52 +1 100250..101074 + 274 28377063 thiD lp_0114 - phosphomethylpyrimidine kinase 90 52.45 +1 101064..101717 + 217 28377064 thiE lp_0115 - thiamine-phosphate pyrophosphorylase 91 49.08 +1 101717..102916 + 399 28377065 - lp_0116 - purine-cytosine transport protein 92 51.28 +1 102998..103738 + 246 28377066 - lp_0117 - hypothetical protein 93 49.22 +1 103981..105573 + 530 28377067 - lp_0118 - hypothetical protein 94 45.01 0 105689..106159 - 156 28377068 - lp_0119 - NTP pyrophosphohydrolase 95 44.32 0 106392..107756 + 454 28377069 - lp_0120 - amino acid transport protein 96 46.54 0 107784..108563 + 259 28377070 - lp_0121 - hypothetical protein 97 50.06 +1 108588..109370 + 260 28377071 hpo lp_0122 - halo peroxidase 98 49.32 +1 109566..112304 - 912 28377072 pacL1 lp_0124 - cation transporting P-type ATPase 99 46.25 0 112589..113347 + 252 28377073 - lp_0125 - purine nucleoside phosphorylase (putative) 100 43.08 0 113390..113584 - 64 28377074 - lp_0126 - stress-responsive transcription regulator (putative) 45.07 MEAN 4.00 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.