IslandPath Analysis: Myxococcus xanthus DK 1622



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 68.63   STD DEV: 3.29
Myxococcus xanthus DK 1622, complete genome - 1..9139763
7331 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 65.85	0	87..1439	+	450	108761581	dnaA	MXAN_0001	-	chromosomal replication initiator protein DnaA
2	 70.14	0	1519..3420	+	633	108764057	-	MXAN_0002	-	hypothetical protein
3	 63.93	-1	3553..3990	-	145	108757573	-	MXAN_0003	-	CBS domain-containing protein
4	 69.12	0	4009..4620	-	203	108762107	-	MXAN_0004	-	hypothetical protein
5	 70.77	0	4634..5485	-	283	108762349	-	MXAN_0005	-	hypothetical protein
6	 70.55	0	8667..8975	-	102	108757614	-	MXAN_0008	-	hypothetical protein
7	 69.42	0	9261..10496	-	411	108757369	-	MXAN_0009	-	major facilitator transporter
8	 71.24	0	10660..12276	-	538	108759107	-	MXAN_0010	-	CapA family protein
9	 69.12	0	12409..12978	-	189	108763632	-	MXAN_0012	-	DoxD-like family protein
10	 69.28	0	13054..14049	+	331	108757906	-	MXAN_0013	-	hypothetical protein
11	 71.92	+1	14066..14845	-	259	108758446	-	MXAN_0014	-	hypothetical protein
12	 67.58	0	15080..16390	+	436	108763598	-	MXAN_0015	-	hypothetical protein
13	 68.30	0	16412..18307	-	631	108757004	-	MXAN_0016	-	PHB depolymerase family esterase
14	 69.87	0	18526..19494	-	322	108761672	gshB	MXAN_0017	-	glutathione synthase
15	 68.83	0	19574..21286	-	570	108761425	-	MXAN_0018	-	serine/threonine kinase family protein
16	 72.80	+1	22471..24672	+	733	108758631	-	MXAN_0019	-	hypothetical protein
17	 71.04	0	24666..25397	-	243	108757099	-	MXAN_0020	-	hypothetical protein
18	 72.92	+1	25822..27387	-	521	108759965	-	MXAN_0021	-	hypothetical protein
19	 69.01	0	27440..28207	-	255	108761910	-	MXAN_0022	-	putative lipoprotein
20	 71.83	0	28264..31071	-	935	108762968	pkn13	MXAN_0023	-	serine/threonine kinase PKN13
21	 71.47	0	31391..33286	+	631	108760400	-	MXAN_0024	-	3'-5' exoribonuclease
22	 60.84	-2	33255..33941	+	228	108760513	-	MXAN_0025	-	hypothetical protein
23	 63.57	-1	33951..34370	+	139	108758114	-	MXAN_0026	-	hypothetical protein
24	 66.67	0	34381..35274	-	297	108757069	-	MXAN_0027	-	hypothetical protein
25	 64.71	-1	35219..35986	-	255	108763817	-	MXAN_0028	-	hypothetical protein
26	 72.05	+1	35989..38070	+	693	108759648	-	MXAN_0029	-	hypothetical protein
27	 68.64	0	38087..39049	-	320	108762087	-	MXAN_0030	-	hypothetical protein
28	 65.26	-1	39368..39937	+	189	108759668	-	MXAN_0031	-	putative lipoprotein
29	 66.67	0	39934..40524	+	196	108757226	-	MXAN_0032	-	hypothetical protein
30	 67.07	0	40722..41213	+	163	108757977	-	MXAN_0033	-	hypothetical protein
31	 70.43	0	41220..41990	-	256	108760206	-	MXAN_0034	-	HAD superfamily hydrolase
32	 71.61	0	42049..43059	-	336	108759571	-	MXAN_0035	-	aliphatic sulfonate ABC transporter substrate-binding protein
33	 69.95	0	43139..43900	-	253	108760412	-	MXAN_0036	-	putative aliphatic sulfonates ABC transporter, permease protein
34	 71.92	+1	43910..44689	-	259	108761513	-	MXAN_0037	-	putative aliphatic sulfonates ABC transporter, ATP-binding protein
35	 68.48	0	44867..45361	+	164	108758634	-	MXAN_0038	-	hypothetical protein
36	 71.18	0	45388..46008	-	206	108763586	-	MXAN_0039	-	hypothetical protein
37	 70.72	0	46167..47252	+	361	108760728	-	MXAN_0040	-	putative glucose 1-dehydrogenase
38	 67.90	0	47274..49139	+	621	108762865	-	MXAN_0041	-	glycosy hydrolase family protein
39	 70.07	0	49156..51831	-	891	108757805	-	MXAN_0042	-	hypothetical protein
40	 73.53	+1	51872..53212	-	446	108757612	-	MXAN_0043	-	hypothetical protein
41	 65.16	-1	53209..53673	-	154	108760821	-	MXAN_0044	-	hypothetical protein
42	 71.79	0	53785..54915	+	376	108760785	-	MXAN_0045	-	hypothetical protein
43	 58.53	-2	54872..55510	-	212	108759532	-	MXAN_0046	-	hypothetical protein
44	 57.29	-2	55489..56160	-	223	108759769	-	MXAN_0047	-	hypothetical protein
45	 61.06	-2	56126..56482	-	118	108756919	-	MXAN_0048	-	hypothetical protein
46	 54.36	-2	56489..57073	-	194	108757721	-	MXAN_0049	-	hypothetical protein
47	 61.02	-2	57099..57983	-	294	108763947	-	MXAN_0050	-	hypothetical protein
48	 72.01	+1	58046..58831	+	261	108756957	-	MXAN_0051	-	hypothetical protein
49	 70.88	0	58837..59880	-	347	108763109	-	MXAN_0052	-	hypothetical protein
50	 70.67	0	59886..60509	+	207	108761110	-	MXAN_0053	-	hypothetical protein
51	 67.80	0	60556..60996	-	146	108762090	-	MXAN_0054	-	hypothetical protein
52	 69.72	0	61027..62271	+	414	108763731	-	MXAN_0055	-	hypothetical protein
53	 68.75	0	62304..64466	-	720	108758098	ppk	MXAN_0056	-	polyphosphate kinase
54	 68.38	0	64622..65146	+	174	108759431	-	MXAN_0057	-	hypothetical protein
55	 65.23	-1	65246..65800	+	184	108760360	-	MXAN_0058	-	hypothetical protein
56	 72.51	+1	65872..68061	-	729	108761981	-	MXAN_0059	-	putative lipoprotein
57	 70.09	0	68306..70582	+	758	108762656	-	MXAN_0060	-	sensory box histidine kinase
58	 68.23	0	70592..71488	-	298	108758299	-	MXAN_0061	-	metallo-beta-lactamase family protein
59	 68.61	0	71629..71988	-	119	108757819	-	MXAN_0062	-	hypothetical protein
60	 73.09	+1	72317..73297	-	326	108760524	-	MXAN_0063	-	hypothetical protein
61	 67.85	0	73389..74741	-	450	108756827	-	MXAN_0064	-	hypothetical protein
62	 69.07	0	74587..76128	-	513	108763407	-	MXAN_0067	-	hypothetical protein
63	 66.07	0	75019..75351	+	110	108758389	-	MXAN_0065	-	hypothetical protein
64	 70.20	0	75119..75514	-	131	108760057	-	MXAN_0066	-	hypothetical protein
65	 70.99	0	75585..76625	+	346	108762854	-	MXAN_0068	-	putative DNA-binding regulatory protein
66	 66.88	0	76505..77938	-	477	108762316	-	MXAN_0069	-	TetR family transcriptional regulator
67	 71.75	0	78128..79564	+	478	108763383	-	MXAN_0070	-	serine/threonine kinase family protein
68	 70.46	0	79567..80331	-	254	108757115	-	MXAN_0071	-	hypothetical protein
69	 67.10	0	80456..80920	-	154	108760700	-	MXAN_0072	-	thioesterase family protein
70	 69.76	0	80917..81369	-	150	108758229	-	MXAN_0073	-	thioesterase family protein
71	 69.56	0	81438..82439	-	333	108760307	-	MXAN_0074	-	hypothetical protein
72	 68.97	0	82834..86007	+	1057	108763117	-	MXAN_0075	-	WD-40-like repeat-containing amidohydrolase
73	 68.39	0	86056..86520	+	154	108763953	-	MXAN_0076	-	appr-1-p processing domain-containing protein
74	 70.87	0	86696..87862	+	388	108757973	-	MXAN_0077	-	hypothetical protein
75	 68.37	0	87914..88792	-	292	108762350	-	MXAN_0078	-	short chain dehydrogenase/reductase family oxidoreductase
76	 71.45	0	88836..89504	-	222	108761552	-	MXAN_0079	-	TetR family transcriptional regulator
77	 70.77	0	89549..91279	+	576	108762575	-	MXAN_0080	-	hypothetical protein
78	 67.47	0	91284..92900	+	538	108756800	accB	MXAN_0081	-	acetyl-CoA carboxylase carboxyltransferase
79	 69.82	0	92915..94909	+	664	108759202	accC	MXAN_0082	-	acetyl-CoA carboxylase, biotin carboxylase
80	 68.47	0	95005..96057	+	350	108759793	-	MXAN_0083	-	hypothetical protein
81	 62.85	-1	96070..96987	+	305	108761100	-	MXAN_0084	-	hypothetical protein
82	 57.14	-2	96996..97583	+	195	108761927	-	MXAN_0085	-	hypothetical protein
83	 67.75	0	97598..98335	+	245	108762425	-	MXAN_0086	-	hypothetical protein
84	 70.07	0	98351..99553	-	400	108761231	-	MXAN_0087	-	major facilitator family transporter
85	 70.31	0	99616..100686	+	356	108759555	-	MXAN_0088	-	2OG-Fe(II) oxygenase family oxidoreductase
86	 67.29	0	100774..101418	+	214	108759330	-	MXAN_0089	-	glutathione S-transferase domain-containing protein
87	 64.95	-1	101508..102089	+	193	108758237	-	MXAN_0090	-	TetR family transcriptional regulator
88	 69.74	0	102329..103465	+	378	108763599	-	MXAN_0091	-	HAE1 family efflux transporter MFP subunit
89	 68.16	0	103480..106620	+	1046	108762552	-	MXAN_0092	-	HAE1 family efflux transporter
90	 68.83	0	106672..107040	-	122	108761259	-	MXAN_0093	-	hypothetical protein
91	 65.00	-1	107033..108109	-	358	108763737	-	MXAN_0094	-	amidohydrolase family protein
92	 68.66	0	108152..110458	-	768	108759722	-	MXAN_0095	-	sensory box histidine kinase/response regulator
93	 68.54	0	110594..111340	-	248	108758711	-	MXAN_0096	-	hypothetical protein
94	 68.29	0	111354..112583	-	409	108761177	-	MXAN_0097	-	HipA-like protein
95	 69.95	0	112585..114258	-	557	108762017	-	MXAN_0098	-	hypothetical protein
96	 64.76	-1	114381..114485	+	34	108762974	-	MXAN_0099	-	hypothetical protein
97	 74.10	+1	114710..116215	+	501	108762521	-	MXAN_0100	-	M28D family peptidase
98	 64.53	-1	116347..117471	+	374	108761446	-	MXAN_0101	-	hypothetical protein
99	 61.48	-2	117468..118238	+	256	108760054	-	MXAN_0102	-	hypothetical protein
100	 64.76	-1	118283..118753	+	156	108759284	-	MXAN_0103	-	hypothetical protein
68.63	MEAN

3.29	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.